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CBS51388_000998-T1, CBS51388_000998-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_000998-T1
Unique NameCBS51388_000998-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2915280..2916888+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_000998-T1 ID=CBS51388_000998-T1|Name=CBS51388_000998-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1609bp|location=Sequence derived from alignment at An01:2915280..2916888+ (Aspergillus niger CBS 513.88)
ATGTCCACCTCCGGGCTTGATATATCCCAACTCTCCGACAGCGAGAGGTC
CGCTCTCGAGACTTATACTGCGGTCACCGGTCAGGAACATTCGGAAGCCA
TTCCTTTGTTGCGCCGCTCACAATGGAATGTGCAGGTAAGGCCGGATGAT
GACATACTACCTTCAGATGTCATGGGAACTAATCAGTCGCTGCTTTCAGA
TCGCCATCTCCAAGTTCTTTGACGGCGAAGGGCCGGATCCCGTCGAGGAA
GCCCGCGCTGCTCTCAACTCCCCTCCTCCGCGACCCGCTCGACAGACACA
AAACCTCATGACTGATGACATTGCTGCGCAATTTGCTCCGAATCCCCGTG
CGGCCGAGCCAGCTCCTCGGATAAATACCCAACCTGAAGATCAATCGGTC
TATCGCCCGCCTTTCATACTAGCTCTGCTGTTTACTCCGCTCAACCTCCT
CTATCGACTACTCTACAGCTCCTTCCGCCTCTTTGGTGCCTTGTTTCCCT
TCCTTCCGCGCTTCTTTAACACAACAGCGAATCCCGCTCTTCAAAGCTCC
CGGAGAAATACCAACGGTCGCCGGCCCTTGAGTCCCAAAGATACGGCCGC
CCGGTTCATCCGGGAATTCGAGGAGGAATATGGCACCAACTCGATCAGTT
TCCTCGAGAACGGATATAATATGGCGTTGGAGAAAGCCCACCGGGACCTC
AAATTCCTCCTAGTTGTGCTTCTTGCCCCCGAGCATGACGATACAAATGG
CTGGGTCCGAGACACATTTCTATCTCGCGAAGTGACCGACTTTGTGAACG
ACCCGCAAAACGACTTGCTTGTCTGGGGAGGGAATGTTCAAGACTCTGAG
GCTTACCAGATTGCCAACTCCATCCGCTGCACCAAGTTTCCCTTTGCAGC
GGCACTAGTCCACACTCCGAATGTTTCCTCGAATGCGATGTCGGTTGTGT
CGAGAATATCTGGAACAATGTCCCCTGCGGAGTTTGTAGAGAAACTCCGA
TCGGCAATCTCGCAGCACAAGGAGCCTCTCGAGCGCATCCGGTCAACCCG
GGCGGAGCAGCAAGCTTCACGCAGCCTCCGTGAGCAGCAGGACTCCGCCT
ACGAGCGTTCTCTGGCCATTGACAGAGAGCGAGCGAGACAGAGGCGGGAA
GCAGAGGCAGCCCGACAGAGGGAAGAGCAAGAGGCAGCAGAACGTCGAGC
GGCCGAGGAGAAGCGCATACATGATCTCCAGCAATGGAAGCAATGGCGGG
CACAAACCATCACCGAGGAACCCGGACCGGACGTCAAGGACGCTGTTCGC
ATTAGTATTCGACTGCCTTCTGGCGAGCGTGTCATCCGCAAGTTTGCGCC
TGACGCGTCGCTTGACGAGCTCTACGCTTTTGTTGAATGCTACGATATCC
TGAAGGAGCCAACAGAAAAGGCTGCGGAAGCAGTGAAGCCGGAGGGCTTC
GAACACCAGTATGGGTTCCGGCTGGTTTCACCCATGCCGCGGGTGGTCTA
CGAAGTGGAGGCTGGGGGATCAGTGCGGGACAAGATCGGCCGAGGAGGGA
ACCTTCTAGTCGAACCGATCGATGACGACAGCGACGAGGAGGACGAAGAA
GAGGCATAA
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Coding sequence (CDS) from alignment at An01:2915280..2916888+

>CBS51388_000998-T1 ID=CBS51388_000998-T1|Name=CBS51388_000998-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3090bp|location=Sequence derived from alignment at An01:2915280..2916888+ (Aspergillus niger CBS 513.88)
ATGTCCACCTCCGGGCTTGATATATCCCAACTCTCCGACAGCGAGAGGTC
CGCTCTCGAGACTTATACTGCGGTCACCGGTCAGGAACATTCGGAAGCCA
TTCCTTTGTTGCGCCGCTCACAATGGAATGTGCAGATCGCCATCTCCAAG
TTCTTTGACGGCGAAGGGCCGGATCCCGTCGAGGAAGCCCGCGCTGCTCT
CAACTCCCCTCCTCCGCGACCCGCTCGACAGACACAAAACCTCATGACTG
ATGACATTGCTGCGCAATTTGCTCCGAATCCCCGTGCGGCCGAGCCAGCT
CCTCGGATAAATACCCAACCTGAAGATCAATCGGTCTATCGCCCGCCTTT
CATACTAGCTCTGCTGTTTACTCCGCTCAACCTCCTCTATCGACTACTCT
ACAGCTCCTTCCGCCTCTTTGGTGCCTTGTTTCCCTTCCTTCCGCGCTTC
TTTAACACAACAGCGAATCCCGCTCTTCAAAGCTCCCGGAGAAATACCAA
CGGTCGCCGGCCCTTGAGTCCCAAAGATACGGCCGCCCGGTTCATCCGGG
AATTCGAGGAGGAATATGGCACCAACTCGATCAGTTTCCTCGAGAACGGA
TATAATATGGCGTTGGAGAAAGCCCACCGGGACCTCAAATTCCTCCTAGT
TGTGCTTCTTGCCCCCGAGCATGACGATACAAATGGCTGGGTCCGAGACA
CATTTCTATCTCGCGAAGTGACCGACTTTGTGAACGACCCGCAAAACGAC
TTGCTTGTCTGGGGAGGGAATGTTCAAGACTCTGAGGCTTACCAGATTGC
CAACTCCATCCGCTGCACCAAGTTTCCCTTTGCAGCGGCACTAGTCCACA
CTCCGAATGTTTCCTCGAATGCGATGTCGGTTGTGTCGAGAATATCTGGA
ACAATGTCCCCTGCGGAGTTTGTAGAGAAACTCCGATCGGCAATCTCGCA
GCACAAGGAGCCTCTCGAGCGCATCCGGTCAACCCGGGCGGAGCAGCAAG
CTTCACGCAGCCTCCGTGAGCAGCAGGACTCCGCCTACGAGCGTTCTCTG
GCCATTGACAGAGAGCGAGCGAGACAGAGGCGGGAAGCAGAGGCAGCCCG
ACAGAGGGAAGAGCAAGAGGCAGCAGAACGTCGAGCGGCCGAGGAGAAGC
GCATACATGATCTCCAGCAATGGAAGCAATGGCGGGCACAAACCATCACC
GAGGAACCCGGACCGGACGTCAAGGACGCTGTTCGCATTAGTATTCGACT
GCCTTCTGGCGAGCGTGTCATCCGCAAGTTTGCGCCTGACGCGTCGCTTG
ACGAGCTCTACGCTTTTGTTGAATGCTACGATATCCTGAAGGAGCCAACA
GAAAAGGCTGCGGAAGCAGTGAAGCCGGAGGGCTTCGAACACCAGTATGG
GTTCCGGCTGGTTTCACCCATGCCGCGGGTGGTCTACGAAGTGGAGGCTG
GGGGATCAGTGCGGGACAAGATCGGCCGAGGAGGGAACCTTCTAGTCGAA
CCGATCGATGACGACAGCGACGAGGAGGACGAAGAAGAGGCATAAATGTC
CACCTCCGGGCTTGATATATCCCAACTCTCCGACAGCGAGAGGTCCGCTC
TCGAGACTTATACTGCGGTCACCGGTCAGGAACATTCGGAAGCCATTCCT
TTGTTGCGCCGCTCACAATGGAATGTGCAGATCGCCATCTCCAAGTTCTT
TGACGGCGAAGGGCCGGATCCCGTCGAGGAAGCCCGCGCTGCTCTCAACT
CCCCTCCTCCGCGACCCGCTCGACAGACACAAAACCTCATGACTGATGAC
ATTGCTGCGCAATTTGCTCCGAATCCCCGTGCGGCCGAGCCAGCTCCTCG
GATAAATACCCAACCTGAAGATCAATCGGTCTATCGCCCGCCTTTCATAC
TAGCTCTGCTGTTTACTCCGCTCAACCTCCTCTATCGACTACTCTACAGC
TCCTTCCGCCTCTTTGGTGCCTTGTTTCCCTTCCTTCCGCGCTTCTTTAA
CACAACAGCGAATCCCGCTCTTCAAAGCTCCCGGAGAAATACCAACGGTC
GCCGGCCCTTGAGTCCCAAAGATACGGCCGCCCGGTTCATCCGGGAATTC
GAGGAGGAATATGGCACCAACTCGATCAGTTTCCTCGAGAACGGATATAA
TATGGCGTTGGAGAAAGCCCACCGGGACCTCAAATTCCTCCTAGTTGTGC
TTCTTGCCCCCGAGCATGACGATACAAATGGCTGGGTCCGAGACACATTT
CTATCTCGCGAAGTGACCGACTTTGTGAACGACCCGCAAAACGACTTGCT
TGTCTGGGGAGGGAATGTTCAAGACTCTGAGGCTTACCAGATTGCCAACT
CCATCCGCTGCACCAAGTTTCCCTTTGCAGCGGCACTAGTCCACACTCCG
AATGTTTCCTCGAATGCGATGTCGGTTGTGTCGAGAATATCTGGAACAAT
GTCCCCTGCGGAGTTTGTAGAGAAACTCCGATCGGCAATCTCGCAGCACA
AGGAGCCTCTCGAGCGCATCCGGTCAACCCGGGCGGAGCAGCAAGCTTCA
CGCAGCCTCCGTGAGCAGCAGGACTCCGCCTACGAGCGTTCTCTGGCCAT
TGACAGAGAGCGAGCGAGACAGAGGCGGGAAGCAGAGGCAGCCCGACAGA
GGGAAGAGCAAGAGGCAGCAGAACGTCGAGCGGCCGAGGAGAAGCGCATA
CATGATCTCCAGCAATGGAAGCAATGGCGGGCACAAACCATCACCGAGGA
ACCCGGACCGGACGTCAAGGACGCTGTTCGCATTAGTATTCGACTGCCTT
CTGGCGAGCGTGTCATCCGCAAGTTTGCGCCTGACGCGTCGCTTGACGAG
CTCTACGCTTTTGTTGAATGCTACGATATCCTGAAGGAGCCAACAGAAAA
GGCTGCGGAAGCAGTGAAGCCGGAGGGCTTCGAACACCAGTATGGGTTCC
GGCTGGTTTCACCCATGCCGCGGGTGGTCTACGAAGTGGAGGCTGGGGGA
TCAGTGCGGGACAAGATCGGCCGAGGAGGGAACCTTCTAGTCGAACCGAT
CGATGACGACAGCGACGAGGAGGACGAAGAAGAGGCATAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_000998CBS51388_000998Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000998-T1.exon1CBS51388_000998-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_000998-T1.exon2CBS51388_000998-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000998-T1.cdsCBS51388_000998-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_000998-T1CBS51388_000998-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG09262E4T
DBxrefInterPro:IPR009060
DBxrefInterPro:IPR029071
DBxrefInterPro:IPR001012
DBxrefInterPro:IPR036249
DBxrefInterPro:IPR006577
DBxrefPFAM:PF00789
DBxrefPFAM:PF14555
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2915280..2916888 +
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