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CBS51388_001009-T1, CBS51388_001009-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001009-T1
Unique NameCBS51388_001009-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:2961386..2964703+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001009-T1 ID=CBS51388_001009-T1|Name=CBS51388_001009-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=3318bp|location=Sequence derived from alignment at An01:2961386..2964703+ (Aspergillus niger CBS 513.88)
ATGTCCAGATCACGATCTAGTATGGCGAGCGACGGGCACGATCGTCTGGA
ACCACGACTGCTGCGAGCAGCCGAGAGCGACCAAGTCGAGGTCCTGCAAC
ACATCGTGGAACTGGCCCGTGACAATGGCCAGCTCAGCGACAACTTCCTG
CGAATCGGACTCATGCGCAGCTGTGAGCGGGGATCGATTGCAGCAACTCA
ATTCCTTCTGGCTCTAGGCGCAAAGACCGACGTCGCAAATAACCGTCCTT
CACCGCTCCTACGCGCGGTCGAGCGCAACCACGTTCGCATCGTGCAGCTC
CTGCTAGATTATGGCGCGTCACCGGAGATAACGGATAAGAAAGGTCGGAC
TGCATTGATGACAGCGGCATGGAAAAATCACTGGCATGTGCTCCACCTTC
TCATATCGCGTGGTGCAGACGCCAATGCGAAGGACCAGAAGAAGAGAAAT
GTCTTGCATAACCTGGCCGCGGATAAGCAATGTGATTGGGGCGAGGATGT
CATTGAGCTTTTGCTACGCACAAGCTGCAAGCTAGACGGGGTTTCAGGTC
AAGATGATTTGGGTCGTACCCCTTTGCATTGGGCCTGTGCGACAGGAAAA
TTTCGCTTCGCAGAGATGCTGCTCGCCAGACCGGAGGGGCCAATCGCAGA
TGTGAACGCAGTGGATTTCAGGAACAAGACTTCTCTCCATATTGCTGTCG
CCCATGGTCGCGATGATATTGTTCAGCTCTTACTCCGGCATAAAGCAGAT
ATCAACGCGAGGAGTGACGGAGGCTGGACGCCTCTTCACAACGCCTGTGA
CAAAGGAGCTGAATTGATCGTGCGCATACTCTTGCGGGAAGGGGCCCAGA
TCAACAGCCAGTTGTTGACTGGGATCACACCATTGCATCTGGCGGCGCAG
GCTGGCCATCGGGAGGTTGTTGAATGTTTGATGGAATACAAAGAGCTGAA
AACGAGAATTCGCGACAATTTTGGCAGTACACCCTTCCTGCGAGCAGCCC
AATTCAAGCGCCGGGATATTGTGTCGCTCCTGGCTCCCTTTAATAATATC
GATGCGCTTACGCCGGAAGCAAAGGGAGCGTGCGAAGGCTTCGAGGCTAC
TATTGTGGACTTTGGAAACTTCCACAACGAGAACAAAGTCAAGAAGACGT
CGGTCTACAATCTTCTATATGGCCGCGATCCTGGAAACCCGCGCAAACAA
GCCATTAAGACATTGCCAGCCGACAGTCGAGCGACCGAATTTCGTTGGAT
CCACCTGCCAGCTAATAACCTTACCTGGGTCGAAGCTTTGCTCACGAAAT
CATTCATCGAGGAGGGAGCCCACGACGTGGAAAGCTTCAAGGGGCTTGAA
AGGTCGTTTCGATATCAACACCGCGGACAAAGAATCCATTCTCACTTTAT
GCGACCATTGTGTCAGAGTACCCCTCGCGCAGCACGACTCCGGGAAGAGG
ATAGTTCGGAAGAGAAAGAGATGATATCTCCCCGAATCTTGGTGAACGGG
CAGTCTCTTGAAACGCCGAAATCCCCGGGTGAGGGAGGCAGTCCGAGGGG
CCGGAAACTAAGCGGCAAAAGCGACCGGTCAGATACCAATCTGCACAACG
ATAATGGCCCCCCTGGAAAGAAAGGAAAGAACACGACGAAGCACAGCAAG
AGCGGGGGATTGAAAAAGCCAGACTCCAGAAACCAATCCGTTGTCGCTCA
TGAGAGGCATCGGCCGGTGCTCTCACTGTGCAAGGAGCAAGCCCACACAA
CCTGCAATGTGTGCATGTTCATGCCTTACTTGCATTTTGAAACGGATGAG
CGAAGAAGGAAGATGCAGGAAGCGATCAAACGTGCTGAGACGCGCAACTT
CGCCCACCCGGGTCTTACACGAACTCCTACGAGAGATGAGCTTCTTATCA
GTGCGCACCTAGCGTCATCCACCTCTTCGCTACATATCCGGCGCACGTTG
GATCAGTTCTTCTACCCCAATATCGATACGCAGACTCGGGACCAGGATCA
GGTCGTCTATCGCTATCAGACGAAGGGGCAAGGCAGCGAACGCTCCTGGG
CCGAGCCCAAGATCTTCATGGTCGACCAGCTGTGGATGTGGATTATAGGA
ACGAATTTGATTGTGACCAGTTTCCCCCAGCGGTGGGATCAACCTAAGAA
TGACCCTCTCAATGTTCTGGACGGTATCATTGAAGACATCAATTCCAAGA
CTCGGGAGCCGGTGCGGTCCGTTTACGATCTGGCTATCATTATCACCACC
CGCTGCTCCGGCGTGTTCGACCGTCACCGCATGGGAGACGAGGAGTATCA
ATTCTTGGACATGTTCGAGGCCTCGATCGGTGTGGCCACGGACCGGGAAA
CTGTGCTCTTCAACCGGTTCAACCGAGCATCAGCGCAGGCATCGGACTGG
CTAAAGAACCACCGCAAGCTTAGTCGCTTTGCCAGGGATCCGCTTACCAA
AGGTGAGCCGGCCGAGAACAGCTTTGAGCGGTTTCTTAAAGAAGAGGAGG
ATGAGGATGCGCAGCCCCTCTTTGTGGACAACTTGCTTGACATCGGCCAA
GAAACTGAGCTCCTTTCAGAAGCCAAGGATATCCGCGATGAGCTCAACAT
GATCCGAACGGTCTTGCAGCACCAGCAGAATGTCCTTCTGGATTTCCAGG
AAGCTATTTGTGAAATTTACTACGGACAGCAGCGATCACAGCATGAAGTC
AAGAAGCGGTTCAAGGAACAGCAGCGCACGATCGACATGCACCTGAAGGA
TATTGAGCGGATGGACAAACAAGCCGAGCGAATTTATTCTTCCATTACAG
ACCTGCTGGACCTCAAACAGAAACATGCCAACGCGTTCGAGGCACGGTTC
GCCCGCGATCAAGCAGCCGGAACGACACGCCAGGGGAAGATCATGATGGT
CTTTACTATCGTTACGATCATTTTCCTCCCACTTTCTTTTATTACATCTG
TCTTCGCGATCAACATGGCCGAGTTCGAAGGGTCAAACGAGCTGCATCTG
CCGTATGTGGCCAAGTACACGTTTGGCATTGGCTTTGCCATCTCTATTCC
CTTGATCTTGGTTGCGCTGTCTGTCGATGACATCGGAGACGTCTGTCAGG
AGGGTATCCGACGAATGCGCCGATGGATGTCGCAGAAGAGGGCTGATGCG
TCCCCTGCTGGCATGCAGGATAATTCCAGGCCGACGGCGTTCGAGATCGA
GAAGATCCTCAGTGCTCGTCGGTCTCGGAAGAGTGCGGAATTGGACACGG
ACTTTGCAGGCAGCCTGCTTCCTGTGTCGACGCGAGAAACTACCCGGACC
GTGCTGTCCCGTGGATGA
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Coding sequence (CDS) from alignment at An01:2961386..2964703+

>CBS51388_001009-T1 ID=CBS51388_001009-T1|Name=CBS51388_001009-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3318bp|location=Sequence derived from alignment at An01:2961386..2964703+ (Aspergillus niger CBS 513.88)
ATGTCCAGATCACGATCTAGTATGGCGAGCGACGGGCACGATCGTCTGGA
ACCACGACTGCTGCGAGCAGCCGAGAGCGACCAAGTCGAGGTCCTGCAAC
ACATCGTGGAACTGGCCCGTGACAATGGCCAGCTCAGCGACAACTTCCTG
CGAATCGGACTCATGCGCAGCTGTGAGCGGGGATCGATTGCAGCAACTCA
ATTCCTTCTGGCTCTAGGCGCAAAGACCGACGTCGCAAATAACCGTCCTT
CACCGCTCCTACGCGCGGTCGAGCGCAACCACGTTCGCATCGTGCAGCTC
CTGCTAGATTATGGCGCGTCACCGGAGATAACGGATAAGAAAGGTCGGAC
TGCATTGATGACAGCGGCATGGAAAAATCACTGGCATGTGCTCCACCTTC
TCATATCGCGTGGTGCAGACGCCAATGCGAAGGACCAGAAGAAGAGAAAT
GTCTTGCATAACCTGGCCGCGGATAAGCAATGTGATTGGGGCGAGGATGT
CATTGAGCTTTTGCTACGCACAAGCTGCAAGCTAGACGGGGTTTCAGGTC
AAGATGATTTGGGTCGTACCCCTTTGCATTGGGCCTGTGCGACAGGAAAA
TTTCGCTTCGCAGAGATGCTGCTCGCCAGACCGGAGGGGCCAATCGCAGA
TGTGAACGCAGTGGATTTCAGGAACAAGACTTCTCTCCATATTGCTGTCG
CCCATGGTCGCGATGATATTGTTCAGCTCTTACTCCGGCATAAAGCAGAT
ATCAACGCGAGGAGTGACGGAGGCTGGACGCCTCTTCACAACGCCTGTGA
CAAAGGAGCTGAATTGATCGTGCGCATACTCTTGCGGGAAGGGGCCCAGA
TCAACAGCCAGTTGTTGACTGGGATCACACCATTGCATCTGGCGGCGCAG
GCTGGCCATCGGGAGGTTGTTGAATGTTTGATGGAATACAAAGAGCTGAA
AACGAGAATTCGCGACAATTTTGGCAGTACACCCTTCCTGCGAGCAGCCC
AATTCAAGCGCCGGGATATTGTGTCGCTCCTGGCTCCCTTTAATAATATC
GATGCGCTTACGCCGGAAGCAAAGGGAGCGTGCGAAGGCTTCGAGGCTAC
TATTGTGGACTTTGGAAACTTCCACAACGAGAACAAAGTCAAGAAGACGT
CGGTCTACAATCTTCTATATGGCCGCGATCCTGGAAACCCGCGCAAACAA
GCCATTAAGACATTGCCAGCCGACAGTCGAGCGACCGAATTTCGTTGGAT
CCACCTGCCAGCTAATAACCTTACCTGGGTCGAAGCTTTGCTCACGAAAT
CATTCATCGAGGAGGGAGCCCACGACGTGGAAAGCTTCAAGGGGCTTGAA
AGGTCGTTTCGATATCAACACCGCGGACAAAGAATCCATTCTCACTTTAT
GCGACCATTGTGTCAGAGTACCCCTCGCGCAGCACGACTCCGGGAAGAGG
ATAGTTCGGAAGAGAAAGAGATGATATCTCCCCGAATCTTGGTGAACGGG
CAGTCTCTTGAAACGCCGAAATCCCCGGGTGAGGGAGGCAGTCCGAGGGG
CCGGAAACTAAGCGGCAAAAGCGACCGGTCAGATACCAATCTGCACAACG
ATAATGGCCCCCCTGGAAAGAAAGGAAAGAACACGACGAAGCACAGCAAG
AGCGGGGGATTGAAAAAGCCAGACTCCAGAAACCAATCCGTTGTCGCTCA
TGAGAGGCATCGGCCGGTGCTCTCACTGTGCAAGGAGCAAGCCCACACAA
CCTGCAATGTGTGCATGTTCATGCCTTACTTGCATTTTGAAACGGATGAG
CGAAGAAGGAAGATGCAGGAAGCGATCAAACGTGCTGAGACGCGCAACTT
CGCCCACCCGGGTCTTACACGAACTCCTACGAGAGATGAGCTTCTTATCA
GTGCGCACCTAGCGTCATCCACCTCTTCGCTACATATCCGGCGCACGTTG
GATCAGTTCTTCTACCCCAATATCGATACGCAGACTCGGGACCAGGATCA
GGTCGTCTATCGCTATCAGACGAAGGGGCAAGGCAGCGAACGCTCCTGGG
CCGAGCCCAAGATCTTCATGGTCGACCAGCTGTGGATGTGGATTATAGGA
ACGAATTTGATTGTGACCAGTTTCCCCCAGCGGTGGGATCAACCTAAGAA
TGACCCTCTCAATGTTCTGGACGGTATCATTGAAGACATCAATTCCAAGA
CTCGGGAGCCGGTGCGGTCCGTTTACGATCTGGCTATCATTATCACCACC
CGCTGCTCCGGCGTGTTCGACCGTCACCGCATGGGAGACGAGGAGTATCA
ATTCTTGGACATGTTCGAGGCCTCGATCGGTGTGGCCACGGACCGGGAAA
CTGTGCTCTTCAACCGGTTCAACCGAGCATCAGCGCAGGCATCGGACTGG
CTAAAGAACCACCGCAAGCTTAGTCGCTTTGCCAGGGATCCGCTTACCAA
AGGTGAGCCGGCCGAGAACAGCTTTGAGCGGTTTCTTAAAGAAGAGGAGG
ATGAGGATGCGCAGCCCCTCTTTGTGGACAACTTGCTTGACATCGGCCAA
GAAACTGAGCTCCTTTCAGAAGCCAAGGATATCCGCGATGAGCTCAACAT
GATCCGAACGGTCTTGCAGCACCAGCAGAATGTCCTTCTGGATTTCCAGG
AAGCTATTTGTGAAATTTACTACGGACAGCAGCGATCACAGCATGAAGTC
AAGAAGCGGTTCAAGGAACAGCAGCGCACGATCGACATGCACCTGAAGGA
TATTGAGCGGATGGACAAACAAGCCGAGCGAATTTATTCTTCCATTACAG
ACCTGCTGGACCTCAAACAGAAACATGCCAACGCGTTCGAGGCACGGTTC
GCCCGCGATCAAGCAGCCGGAACGACACGCCAGGGGAAGATCATGATGGT
CTTTACTATCGTTACGATCATTTTCCTCCCACTTTCTTTTATTACATCTG
TCTTCGCGATCAACATGGCCGAGTTCGAAGGGTCAAACGAGCTGCATCTG
CCGTATGTGGCCAAGTACACGTTTGGCATTGGCTTTGCCATCTCTATTCC
CTTGATCTTGGTTGCGCTGTCTGTCGATGACATCGGAGACGTCTGTCAGG
AGGGTATCCGACGAATGCGCCGATGGATGTCGCAGAAGAGGGCTGATGCG
TCCCCTGCTGGCATGCAGGATAATTCCAGGCCGACGGCGTTCGAGATCGA
GAAGATCCTCAGTGCTCGTCGGTCTCGGAAGAGTGCGGAATTGGACACGG
ACTTTGCAGGCAGCCTGCTTCCTGTGTCGACGCGAGAAACTACCCGGACC
GTGCTGTCCCGTGGATGA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001009CBS51388_001009Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001009-T1.exon1CBS51388_001009-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001009-T1.cdsCBS51388_001009-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001009-T1CBS51388_001009-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR036770
DBxrefInterPro:IPR020683
DBxrefInterPro:IPR002110
DBxrefPFAM:PF01544
DBxrefPFAM:PF13857
DBxrefPFAM:PF13637
DBxrefPFAM:PF13606
DBxrefPFAM:PF12796
DBxrefPFAM:PF00023
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:2961386..2964703 +
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