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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3025109..3027085+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001031-T1 ID=CBS51388_001031-T1|Name=CBS51388_001031-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1977bp|location=Sequence derived from alignment at An01:3025109..3027085+ (Aspergillus niger CBS 513.88)
ATGGCTACACCTACAGTATCGACTCCCGTGAAGACCCACCATGGGATCTT
CTCCACCAAGACGGCTGGTGGCCGCATGCCCCTTACACCTTCACCACGCA
CTCGCGCAGGAAGTGTGACGTCAAACCACTCTTCCCCATTCACACCTCCC
TGTGGTGCTCAAGAATCAGGCAAGGAGCATGGAAAGTCCGTCTACGGTGG
TAACCTCTCTTCATACTTCGCCAAGTCTGTCTCGAGGACAGCCCGCAACT
ACCGCGAATCCCCCAAGTCCAACATCGCCCGTGCTCGCACACGCAAGTCT
CCCAGACACCTTGAGCTGGGTGTATCAGAATGGGCCCTGACAGGCACCGG
TCCATCATCACGGACTCCTACCAAGGAGCGCCTACGAAAAGAGGTCGTGG
GGAAGGAAGTGGCCAAGGAGGTGACCAGAAAAGAACCGCCGAAGAAGGAG
GTAGTCAAGAAGGAGGCAGTCAAGAAGGAGGTGTCGAGGAAAGAAGCGCC
AAGAAAGGAGATCACCACTCGGACCACGAGGTCAGGAAAGACGACCGTCC
GCATTCCCCACAACGCGGGTGACAGATTCATTCCGAACCGTACTGCCAGT
GAGGGTCTTGTAACTGCCGGCACAGCCAAGCCAGAGGAAAGCCAACGGCC
AAAGACCAGCAGCAGTGATGGATCCTCTGTCCTTGCCAATGCCGCGAGTG
CCTTTGACATTGGTGGCCGCGGAACTGATGAAGACATCACCGCAGCTCTT
GAAAGCCTTGGGCTCGAGGATAACGAGCCAACGACCTCATACACCAAGCC
AGCACCGGATGCTGTCGCGTACGAGTCATCGTTGGCAGATGCCTGTGGTG
TGAATCTGAACACTCGCATCCTGGCCTTCAAACCGCCACCCCCAGAGTCA
TCCAAGCCCATTGATCTGCGCGCTCAGTACAACCGCCCTCTCAAGCCTGC
CAAATCCCAGTCAGCTCAGTTCCGCCGACGGGTCCAAACGGCTCCTGAGC
GTGTTCTGGACGCCCCTGGACTTCTTGACGATTACTATCTCAATTTGCTG
GATTGGAGCTCTGGCAACCAGGTTGCAATTGGCTTGGAGCGCAATGTTTA
CGTATGGTCCGCCGATTCAGGATCGGTCAGCTGCCTACTGGAGACTGCAC
CCGACACCTACGTGAGCAGTGTGAAGTGGAGTGGTGATGGCGCCTACGTC
GGTGTCGGCCTTGGAACTGGTGAAGTCCAAATTTGGGATGTTGAGGAAGG
AACCAAGCTTCGCAGTATGTTTGGCCATGACTCTCGTGTAGGTGTCATGG
GCTGGTCTAAGCACACACTGTCTACCGGTGCCCGCAGTGGTCTGGTATTC
AACCATGATGTTCGTATTGCACAGCACAAGGTTGCTGAGCTGGTCTCGCA
TACCTCTGAAGTCTGTGGTCTGGAATGGAGACCCGATGGTGCTCAGCTCG
CCACCGGTGGTAACGACAATCTGGTTAACATCTGGGATGCTCGCTCTCTC
AGCGCGCCCAAGTTCACCAAGACCAACCACCGCGCTGCCGTTAAGGCCCT
CAGTTGGTGCCCCTGGCAGTTGAACCTGCTTGCCACTGGTGGAGGTTCCT
ATGACCGCCACATCCACTTCTGGAACACTACCACTGGTGCTCGCACCAAC
AGCATCGACACCGGCTCCCAGGTCACCAGCTTGAGATGGAGCAACCACTA
CCGCGAGATTGTTAGCTCGAGTGGATTCCCCGACAACTCGTTGAGCATCT
GGAGCTATCCCACTCTGGTTCGGAACGTTGAGATTCCGGCCCACGAGACT
CGTGTACTGCACAGCTGTCTTAGCCCAGATGGGCAACTCCTGGCCACCGC
AGCCGCTGACGAGAGTTTGAAGTTCTGGAAGATCTTCGAGCGCAAGCCTG
GAACCACCGCTGCTGCCTCTCGGGAGGGTGGTGTTGGCAGCAAGGCTCAG
ATGACCAAATCCATGACCATCCGGTAA back to topCoding sequence (CDS) from alignment at An01:3025109..3027085+ >CBS51388_001031-T1 ID=CBS51388_001031-T1|Name=CBS51388_001031-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1977bp|location=Sequence derived from alignment at An01:3025109..3027085+ (Aspergillus niger CBS 513.88)
ATGGCTACACCTACAGTATCGACTCCCGTGAAGACCCACCATGGGATCTT
CTCCACCAAGACGGCTGGTGGCCGCATGCCCCTTACACCTTCACCACGCA
CTCGCGCAGGAAGTGTGACGTCAAACCACTCTTCCCCATTCACACCTCCC
TGTGGTGCTCAAGAATCAGGCAAGGAGCATGGAAAGTCCGTCTACGGTGG
TAACCTCTCTTCATACTTCGCCAAGTCTGTCTCGAGGACAGCCCGCAACT
ACCGCGAATCCCCCAAGTCCAACATCGCCCGTGCTCGCACACGCAAGTCT
CCCAGACACCTTGAGCTGGGTGTATCAGAATGGGCCCTGACAGGCACCGG
TCCATCATCACGGACTCCTACCAAGGAGCGCCTACGAAAAGAGGTCGTGG
GGAAGGAAGTGGCCAAGGAGGTGACCAGAAAAGAACCGCCGAAGAAGGAG
GTAGTCAAGAAGGAGGCAGTCAAGAAGGAGGTGTCGAGGAAAGAAGCGCC
AAGAAAGGAGATCACCACTCGGACCACGAGGTCAGGAAAGACGACCGTCC
GCATTCCCCACAACGCGGGTGACAGATTCATTCCGAACCGTACTGCCAGT
GAGGGTCTTGTAACTGCCGGCACAGCCAAGCCAGAGGAAAGCCAACGGCC
AAAGACCAGCAGCAGTGATGGATCCTCTGTCCTTGCCAATGCCGCGAGTG
CCTTTGACATTGGTGGCCGCGGAACTGATGAAGACATCACCGCAGCTCTT
GAAAGCCTTGGGCTCGAGGATAACGAGCCAACGACCTCATACACCAAGCC
AGCACCGGATGCTGTCGCGTACGAGTCATCGTTGGCAGATGCCTGTGGTG
TGAATCTGAACACTCGCATCCTGGCCTTCAAACCGCCACCCCCAGAGTCA
TCCAAGCCCATTGATCTGCGCGCTCAGTACAACCGCCCTCTCAAGCCTGC
CAAATCCCAGTCAGCTCAGTTCCGCCGACGGGTCCAAACGGCTCCTGAGC
GTGTTCTGGACGCCCCTGGACTTCTTGACGATTACTATCTCAATTTGCTG
GATTGGAGCTCTGGCAACCAGGTTGCAATTGGCTTGGAGCGCAATGTTTA
CGTATGGTCCGCCGATTCAGGATCGGTCAGCTGCCTACTGGAGACTGCAC
CCGACACCTACGTGAGCAGTGTGAAGTGGAGTGGTGATGGCGCCTACGTC
GGTGTCGGCCTTGGAACTGGTGAAGTCCAAATTTGGGATGTTGAGGAAGG
AACCAAGCTTCGCAGTATGTTTGGCCATGACTCTCGTGTAGGTGTCATGG
GCTGGTCTAAGCACACACTGTCTACCGGTGCCCGCAGTGGTCTGGTATTC
AACCATGATGTTCGTATTGCACAGCACAAGGTTGCTGAGCTGGTCTCGCA
TACCTCTGAAGTCTGTGGTCTGGAATGGAGACCCGATGGTGCTCAGCTCG
CCACCGGTGGTAACGACAATCTGGTTAACATCTGGGATGCTCGCTCTCTC
AGCGCGCCCAAGTTCACCAAGACCAACCACCGCGCTGCCGTTAAGGCCCT
CAGTTGGTGCCCCTGGCAGTTGAACCTGCTTGCCACTGGTGGAGGTTCCT
ATGACCGCCACATCCACTTCTGGAACACTACCACTGGTGCTCGCACCAAC
AGCATCGACACCGGCTCCCAGGTCACCAGCTTGAGATGGAGCAACCACTA
CCGCGAGATTGTTAGCTCGAGTGGATTCCCCGACAACTCGTTGAGCATCT
GGAGCTATCCCACTCTGGTTCGGAACGTTGAGATTCCGGCCCACGAGACT
CGTGTACTGCACAGCTGTCTTAGCCCAGATGGGCAACTCCTGGCCACCGC
AGCCGCTGACGAGAGTTTGAAGTTCTGGAAGATCTTCGAGCGCAAGCCTG
GAACCACCGCTGCTGCCTCTCGGGAGGGTGGTGTTGGCAGCAAGGCTCAG
ATGACCAAATCCATGACCATCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR024977 |
| DBxref | InterPro:IPR001680 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12894 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3025109..3027085 + |
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