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CBS51388_001033-T1, CBS51388_001033-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001033-T1
Unique NameCBS51388_001033-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3031774..3033596+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001033-T1 ID=CBS51388_001033-T1|Name=CBS51388_001033-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1823bp|location=Sequence derived from alignment at An01:3031774..3033596+ (Aspergillus niger CBS 513.88)
ATGTCGAACCAGCAGGTGGTGAGTGCATCTTTAAAAACACAAACCTTGCC
AGAGCTAGAGACTTCGATGGGCCTGGACTGTGGCTCAATACTCCCTGCGA
AGTTCTCTATTTCCCCGCTCTAACCCCATCATGATACCATGTGAGATGTT
GGCTTATACCAGTTATCCCTAGGGCACGGTGTTCGATCGTGTCATCCAGG
AGGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAG
CAAACACTGTTAGATTTGCGCAAGGTTAGTGCTCCATCAACATCCATCTT
CCTTTGTTGGAGAGATCTCTTTGAGGTCAAAAGAAGTCGATATGCTTGGG
GGGTGAGAGCCCCAGGGGGAGACGCCCCAAGCGGGGTCCGAGAGGTGCGG
GAAGGGCGGCCGCCTGGGGGCATCGCCTGCTTTTGAGTCTCTTTTTATAC
CGCGCCGCTTTTACCCGCCCTAGTCGGCCTGCCAAGCCGCTTCAGCATCG
TCATTCGCTGCCCGTTTCCCCTTCACCTCTCGGTCTCAGATTTCCTTATA
CTTATCGCTTGACCCTTTGGCTCCTTGCTCCATTCATATATTTCTTTTAA
TTAAAACCTTTCAGTCTGCTAATATTTCCCCTCCAGAGCTGGCAGAAGAA
GCTCTCCTCATTGGGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGC
AACCGGCTCCCCCTCAGACGCAAAATATCCTCCCTCCTACAGCAACTGTA
CCATCAAATGCTCCCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGT
TCCTCCTCCACCTCTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGG
CACCTCCGCTCCAAGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATG
GGTCAACAACAACCTCACATCAAGACCGAACCTGGCGTCAACGGTCAACC
GGGGATGATTCCGATGAATAATATGATGATGCCAAACTCCTCCAACCCTC
AGTCTGCTCAAGAACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCA
GCAGCCGCTAACTCGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGC
AGCCATGGCCATGCCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGC
CCAACGGACAGGCTCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTG
TCTCAACCCCCCGTCGGCAATACTCAAACGGACGGTGCCGGTGATGATGC
CTTGTCTGCATGGAAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAAC
GCCAGGGAGGAGAAGGCGATCGTCTCCTTCGTGAACATCTCAGACAACGG
ATGCTCCAATTAGAAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGA
CTACTCATCAAAGACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGC
CAGCTGAGGTATCAGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTT
CTCGGAGCTCAGTTTGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGA
TGATGAAGATGCTATCAACTCGGACCTTGACGACCCTGATGACCTTGTTG
CTGAGGATCATGATGCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACT
TACGACAAGGTACAACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGA
TGGTATTTTGACCACCGGTGGCAAGGAGTAAGTGCCCTCTTTTCATTAAC
CCCATATCCAATCTCCCGCTAACGAGTTGACAGGTACGTCTTCCACAAAG
GTCAAGGAGAGTTCGAGTGGTAA
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Coding sequence (CDS) from alignment at An01:3031774..3033596+

>CBS51388_001033-T1 ID=CBS51388_001033-T1|Name=CBS51388_001033-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5004bp|location=Sequence derived from alignment at An01:3031774..3033596+ (Aspergillus niger CBS 513.88)
ATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAGGT
CTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCAAA
CACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGGGT
GTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTCA
GACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCCCC
GGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCTG
CAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAGC
TCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACCTC
ACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGATG
AATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAACG
GGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCGG
TCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGCCG
GGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCTCC
ACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTCG
GCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAAG
GCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAGG
CGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGAAG
GCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGACA
TTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAGA
AGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTTG
ACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTATC
AACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGATGC
TGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACAAC
GCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCACC
GGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGTA
AATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAGG
TCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCAA
ACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGGG
TGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCTC
AGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCCC
CGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTCT
GCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAAG
CTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACCT
CACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGAT
GAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAAC
GGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTCG
GTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGCC
GGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCTC
CACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGTC
GGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGAA
GGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAAG
GCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGAA
GGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGAC
ATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCAG
AAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTTT
GACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTAT
CAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGATG
CTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACAA
CGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCAC
CGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGGT
AAATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGAG
GTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGCA
AACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTGG
GTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCCT
CAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTCC
CCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCTC
TGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCAA
GCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAACC
TCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCGA
TGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGAA
CGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACTC
GGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATGC
CGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGCT
CCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCGT
CGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGGA
AGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGAA
GGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAGA
AGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAGA
CATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATCA
GAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGTT
TGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCTA
TCAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGAT
GCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTACA
ACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACCA
CCGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTGG
TAAATGTCGAACCAGCAGGTGGGCACGGTGTTCGATCGTGTCATCCAGGA
GGTCTGTGATGGCTCCCAGGTGGACTTCGAGGAAAGTGGTGTGGACCAGC
AAACACTGTTAGATTTGCGCAAGAGCTGGCAGAAGAAGCTCTCCTCATTG
GGTGTCGCTCACTTCCCTTGGGATCCGCCGCCGCCGCAACCGGCTCCCCC
TCAGACGCAAAATATCCTCCCTCCTACAGCAACTGTACCATCAAATGCTC
CCCGGCCTGGTCCGCCCCCTCAGCCACAGCATCATGTTCCTCCTCCACCT
CTGCAGCAACCCATTCCTCAGTCCGCCCCCGCTACGGCACCTCCGCTCCA
AGCTCCTACTCCAGTTGGGGCCGGCCCCAATGCCATGGGTCAACAACAAC
CTCACATCAAGACCGAACCTGGCGTCAACGGTCAACCGGGGATGATTCCG
ATGAATAATATGATGATGCCAAACTCCTCCAACCCTCAGTCTGCTCAAGA
ACGGGCTGCCAATATGCTTCGTCAGCGTTACGGCGCAGCAGCCGCTAACT
CGGTCAGTCAGCTGCAAGCACAGTCACAGGCACAAGCAGCCATGGCCATG
CCGGGCCAGCAGCGCCCCCAACCCATGCAGCATGTGCCCAACGGACAGGC
TCCACAGATCAAGCAAGAACCGGGTTACCCCCCTGTGTCTCAACCCCCCG
TCGGCAATACTCAAACGGACGGTGCCGGTGATGATGCCTTGTCTGCATGG
AAGGCTGAGGTTGCACGGAGGCGGGAAGCTGCTGAACGCCAGGGAGGAGA
AGGCGATCGTCTCCTTCGTGAACATCTCAGACAACGGATGCTCCAATTAG
AAGGCGGTGGTCTGATGTTGCCTCTCGACGAGCATGACTACTCATCAAAG
ACATTGACTCGTGGGCTGGTGGCTACCCAAGCAGAGCCAGCTGAGGTATC
AGAAGTTGCTGGCTCCTCGTTGCATCCGCCCAAGGTTCTCGGAGCTCAGT
TTGACGGTCCCGGTGGTGATGATGAAAGGGATGAGGATGATGAAGATGCT
ATCAACTCGGACCTTGACGACCCTGATGACCTTGTTGCTGAGGATCATGA
TGCTGAAGATGCCGTAGGCCAGGTCATGCTTTGCACTTACGACAAGGTAC
AACGCGTGAAGAACAAGTGGAAGTGCACACTTAAAGATGGTATTTTGACC
ACCGGTGGCAAGGAGTACGTCTTCCACAAAGGTCAAGGAGAGTTCGAGTG
GTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005672transcription factor TFIIA complex
Vocabulary: Biological Process
TermDefinition
GO:0006367transcription initiation from RNA polymerase II promoter
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001033CBS51388_001033Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001033-T1.exon1CBS51388_001033-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001033-T1.exon2CBS51388_001033-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001033-T1.exon3CBS51388_001033-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001033-T1.exon4CBS51388_001033-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001033-T1.cdsCBS51388_001033-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001033-T1CBS51388_001033-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG092651HW
DBxrefInterPro:IPR009088
DBxrefInterPro:IPR004855
DBxrefPFAM:PF03153
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3031774..3033596 +
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