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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3161022..3161953+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001067-T1 ID=CBS51388_001067-T1|Name=CBS51388_001067-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=932bp|location=Sequence derived from alignment at An01:3161022..3161953+ (Aspergillus niger CBS 513.88)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTGTAAGTTGGACTCTATAGTTACGTACTCTTGCG
ACAGCGAGACAACAATTCTCGATGCTAATTGCGGTGTGAACTCCAAGCGG
GTACGATTCACTGCTTCTTCGAGGGTTATTTTATGATCAACCATGCTCGT
ATGGCATCTGCGCAAGACTTCTTCGGTCAACTATGGAAGGAATATGCCCT
GTCGGATTCGCGATACATGACCTCAGATACCCTCGTCTTGTGTATGGAGA
CTATCACGGTCGTAGGTGCACCCGTGGCTGCAGGGACCCCTGCTCATTGT
CCTCCTTAGCTCCGCCTGCGACACTGTTGCTAAACTACTGGAATAGCTTC
TTTGGGGCCCGCTCTGTTTTCTGGTTGCATACTTGACCCTTTCTCAGCAT
CCTCTGCGCCATCCGCTGCAGATCATCGTGTGCATGAGCCACCTCTATGG
CGATGCTCTGTACTATGCGACCAGCTTGTTCGATCACTACGTTCATGACC
GACCGTACTGCCGCCCGGAGCCTTACTACTTTTGGGTGTACTATTTCCTG
ATGAATTTCATCTGGATTGTGGTTCCGTTCTGTACGTTCCAGTCACCCAC
GGATCCCTTGCTTGATTTTCACTCGTCTTGGGCTGATGATGGAACATAGA
CTATCTTTACCAGAGTATCCGGACAATAACGGAGGCCCTCAGAGTCTTGG
AAAATCCTTCCAGACAGCGCAAGGACCGATAA back to topCoding sequence (CDS) from alignment at An01:3161022..3161953+ >CBS51388_001067-T1 ID=CBS51388_001067-T1|Name=CBS51388_001067-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2796bp|location=Sequence derived from alignment at An01:3161022..3161953+ (Aspergillus niger CBS 513.88)
ATGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAA
TGCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCC
TCACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACC
CTGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTAT
TCTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATT
TTATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAA
CTATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATAC
CCTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCT
GTTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCG
CTGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTGTACTA
TGCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCC
CGGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGG
ATTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAATAACGGA
GGCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAA
TGACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAAT
GCTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCT
CACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCC
TGAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATT
CTGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTT
TATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAAC
TATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACC
CTCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTG
TTTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGC
TGCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTGTACTAT
GCGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCC
GGAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGA
TTGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAATAACGGAG
GCCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAAT
GACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATG
CTCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTC
ACTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCT
GAGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTC
TGTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTT
ATGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACT
ATGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCC
TCGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGT
TTTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCT
GCAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTGTACTATG
CGACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCG
GAGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGAT
TGTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAATAACGGAGG
CCCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAAATG
ACTATTATGGACTCCAAAGCTCCACTCCATCCCTACTACCCCCTCAATGC
TCAAATCTACGATTATGCTCCCAATGAGGCTTCCTTGTTCAGTATCCTCA
CTACTGCTAGCGTTGGCGCGGCAGCTTTGCTGGGAATCATTTTCACCCTG
AGCGGTAGACTCCGACCAGCGCTAACAAAAGCCGACCGTCTTGCTATTCT
GTGGTTTGCCCTCTCGGGTACGATTCACTGCTTCTTCGAGGGTTATTTTA
TGATCAACCATGCTCGTATGGCATCTGCGCAAGACTTCTTCGGTCAACTA
TGGAAGGAATATGCCCTGTCGGATTCGCGATACATGACCTCAGATACCCT
CGTCTTGTGTATGGAGACTATCACGGTCCTTCTTTGGGGCCCGCTCTGTT
TTCTGGTTGCATACTTGACCCTTTCTCAGCATCCTCTGCGCCATCCGCTG
CAGATCATCGTGTGCATGAGCCACCTCTATGGCGATGCTCTGTACTATGC
GACCAGCTTGTTCGATCACTACGTTCATGACCGACCGTACTGCCGCCCGG
AGCCTTACTACTTTTGGGTGTACTATTTCCTGATGAATTTCATCTGGATT
GTGGTTCCGTTCTACTATCTTTACCAGAGTATCCGGACAATAACGGAGGC
CCTCAGAGTCTTGGAAAATCCTTCCAGACAGCGCAAGGACCGATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0016125 | sterol metabolic process |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0047750 | cholestenol delta-isomerase activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR033118 |
| DBxref | InterPro:IPR007905 |
| DBxref | PFAM:PF05241 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3161022..3161953 + |
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