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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3173022..3174808- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001070-T1 ID=CBS51388_001070-T1|Name=CBS51388_001070-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1787bp|location=Sequence derived from alignment at An01:3173022..3174808- (Aspergillus niger CBS 513.88)
ATGGCCGCCGAAAAGGAAGTAGAGAAAGTGGGAACAGCTGAGGCTGGGGA
TGATTCGACTTCGATTGAAGTGGTCAACGCCTCGGGTCACCGTCAGGAAG
TCGAACGGAACTTCAGTCTACTGAGCATTTGTGCCGTTGCTGTTACGACT
GGAAATACATGGATTGCTCAAGGTGGCAGTGTGGTATGCTATGCTAGCCT
TGACACATTATACTTACGGAAGAGTAAAGCAACTGACAGTGTCTTGTTAG
ACAACTGCACTGAGCAATGGAGGACCATCAGGTGTGATTTACGAATTGTA
TGACGCCACTCAACCCTAGAGGAAGGTCCACGCCGTCGCTAATCGTGATT
ATAGCATTGCCGTTTCGGTTTGTTACTGGCTTGTTGCAGCATCGATTGCT
GAACTGGCATCTGGAATGCCTTCTGCGAGTGGAGGTATGTTCTTCTACCA
ATACCCAATTCTGGTCGGTTGCTGATAACAGCTACCAGTCTATCACTGGG
CTTCCATCACAGCAGGAAAATATGGTCGTGTTTGTGGTTTCTTCGCTGGT
TTTTGGAACTCCCTTGCCTGGATTCTCGGTGCTGCCTCCATGTCCGCTAT
CCTAGGGCAGCAGACTGTCTCCATGTATGCCCTCATGCATCCAGGCTTCG
TCCCTCAGGCATGGCATATCTTTGTGAGCTTCATCATCTGCACATGGCTT
TGTTGCTGCATCGTTCTCTTCATGAACCGGTTTCTCCCGCATATCGGTAA
TCTTGGGATGTTCTTCATCTTGGCCGGTGTGTTGATCACCATCATCGTGT
GTGCGGTCATGCCCCATGTCAAGGGCACTGGCTATGCCACAGGCAAAGAT
GTCTGGAGCAGTTGGGAGAACGACACCGGATATTCTAGTCAGGGCTTTGT
CTTTGTTGCCGGTATGCTCAACGGAGCCTACAGTGTGGGCACCCCCGATT
GCTCGTCGCATCTTGCGGAGGAAATTCCTAGGTAAAGTTACCATCGTAAT
TCAGATGCTTGATATACTAATGATGAACAGGCCAAGCCGTAACATTCCCA
AGGCTGTCCTGGCTCAAATGGGCGTCGGCTTCATCACCGGTGTCCTTTAC
ATGATTGCCCTGTTCTATTCGATCACCGATCTCAACGCAGTCATCAACAG
CGTCTACGGATTCCCTCTCGCCGAGATTTACCGTCAAGCAACAGGATCTA
GGGGTGGTGCAATCGGTCTGCTTATCGTGGCTTTCATACCTACGGTCATC
ACTTGCGCTGGTTGTTACATCACCGCTGGTCGCACTTTGTGGACTATCTC
TCGTGACGGAGCAACTCCTTTCTCTCGCTGGCTCGGACATATCAACACAC
GGATGCACAACCCTTTCAATGCCACACTGGTATGCGGTGGGATTGTCACG
ATTCTTGCTTGCATCTACGTCGGATCCACCACTGCCTTTAACGCTTTCGT
TGGCTGTTTCGTGCAGCTATCCAGTCTTTCGTATTTCGCCGCCATCTTTC
CGCATGTGCTTACTCGCCGGTCCTCGTTCACACCCGGTCACTTCTGGATG
GGCCGTATTGGATATCTAATCAATATCTTGGCATGCATCTACATTCTCGC
CTTTGTTGTGATCTTCTGTTTCCCTTACGCCTTGCCCACCGATGCCGCTT
CTATGAACTACGCCAGTCTGATGACTGGAGGCTTGACGATCTTCGTGACT
GTCTGGTGGCTTTTCCGCATGAACACCTATGAGGGACCTAAGTCTATCCC
TATGACCGATAAGGTGATTGTGGCCGACGCGGACTAA back to topCoding sequence (CDS) from alignment at An01:3173022..3174808- >CBS51388_001070-T1 ID=CBS51388_001070-T1|Name=CBS51388_001070-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7800bp|location=Sequence derived from alignment at An01:3173022..3174808- (Aspergillus niger CBS 513.88)
GCCAAGCCGTAACATTCCCAAGGCTGTCCTGGCTCAAATGGGCGTCGGCT
TCATCACCGGTGTCCTTTACATGATTGCCCTGTTCTATTCGATCACCGAT
CTCAACGCAGTCATCAACAGCGTCTACGGATTCCCTCTCGCCGAGATTTA
CCGTCAAGCAACAGGATCTAGGGGTGGTGCAATCGGTCTGCTTATCGTGG
CTTTCATACCTACGGTCATCACTTGCGCTGGTTGTTACATCACCGCTGGT
CGCACTTTGTGGACTATCTCTCGTGACGGAGCAACTCCTTTCTCTCGCTG
GCTCGGACATATCAACACACGGATGCACAACCCTTTCAATGCCACACTGG
TATGCGGTGGGATTGTCACGATTCTTGCTTGCATCTACGTCGGATCCACC
ACTGCCTTTAACGCTTTCGTTGGCTGTTTCGTGCAGCTATCCAGTCTTTC
GTATTTCGCCGCCATCTTTCCGCATGTGCTTACTCGCCGGTCCTCGTTCA
CACCCGGTCACTTCTGGATGGGCCGTATTGGATATCTAATCAATATCTTG
GCATGCATCTACATTCTCGCCTTTGTTGTGATCTTCTGTTTCCCTTACGC
CTTGCCCACCGATGCCGCTTCTATGAACTACGCCAGTCTGATGACTGGAG
GCTTGACGATCTTCGTGACTGTCTGGTGGCTTTTCCGCATGAACACCTAT
GAGGGACCTAAGTCTATCCCTATGACCGATAAGGTGATTGTGGCCGACGC
GGACTAATCTATCACTGGGCTTCCATCACAGCAGGAAAATATGGTCGTGT
TTGTGGTTTCTTCGCTGGTTTTTGGAACTCCCTTGCCTGGATTCTCGGTG
CTGCCTCCATGTCCGCTATCCTAGGGCAGCAGACTGTCTCCATGTATGCC
CTCATGCATCCAGGCTTCGTCCCTCAGGCATGGCATATCTTTGTGAGCTT
CATCATCTGCACATGGCTTTGTTGCTGCATCGTTCTCTTCATGAACCGGT
TTCTCCCGCATATCGGTAATCTTGGGATGTTCTTCATCTTGGCCGGTGTG
TTGATCACCATCATCGTGTGTGCGGTCATGCCCCATGTCAAGGGCACTGG
CTATGCCACAGGCAAAGATGTCTGGAGCAGTTGGGAGAACGACACCGGAT
ATTCTAGTCAGGGCTTTGTCTTTGTTGCCGGTATGCTCAACGGAGCCTAC
AGTGTGGGCACCCCCGATTGCTCGTCGCATCTTGCGGAGGAAATTCCTAG
CATTGCCGTTTCGGTTTGTTACTGGCTTGTTGCAGCATCGATTGCTGAAC
TGGCATCTGGAATGCCTTCTGCGAGTGGAGACAACTGCACTGAGCAATGG
AGGACCATCAGGTGTGATTTACGAATTATGGCCGCCGAAAAGGAAGTAGA
GAAAGTGGGAACAGCTGAGGCTGGGGATGATTCGACTTCGATTGAAGTGG
TCAACGCCTCGGGTCACCGTCAGGAAGTCGAACGGAACTTCAGTCTACTG
AGCATTTGTGCCGTTGCTGTTACGACTGGAAATACATGGATTGCTCAAGG
TGGCAGTGTGGCCAAGCCGTAACATTCCCAAGGCTGTCCTGGCTCAAATG
GGCGTCGGCTTCATCACCGGTGTCCTTTACATGATTGCCCTGTTCTATTC
GATCACCGATCTCAACGCAGTCATCAACAGCGTCTACGGATTCCCTCTCG
CCGAGATTTACCGTCAAGCAACAGGATCTAGGGGTGGTGCAATCGGTCTG
CTTATCGTGGCTTTCATACCTACGGTCATCACTTGCGCTGGTTGTTACAT
CACCGCTGGTCGCACTTTGTGGACTATCTCTCGTGACGGAGCAACTCCTT
TCTCTCGCTGGCTCGGACATATCAACACACGGATGCACAACCCTTTCAAT
GCCACACTGGTATGCGGTGGGATTGTCACGATTCTTGCTTGCATCTACGT
CGGATCCACCACTGCCTTTAACGCTTTCGTTGGCTGTTTCGTGCAGCTAT
CCAGTCTTTCGTATTTCGCCGCCATCTTTCCGCATGTGCTTACTCGCCGG
TCCTCGTTCACACCCGGTCACTTCTGGATGGGCCGTATTGGATATCTAAT
CAATATCTTGGCATGCATCTACATTCTCGCCTTTGTTGTGATCTTCTGTT
TCCCTTACGCCTTGCCCACCGATGCCGCTTCTATGAACTACGCCAGTCTG
ATGACTGGAGGCTTGACGATCTTCGTGACTGTCTGGTGGCTTTTCCGCAT
GAACACCTATGAGGGACCTAAGTCTATCCCTATGACCGATAAGGTGATTG
TGGCCGACGCGGACTAATCTATCACTGGGCTTCCATCACAGCAGGAAAAT
ATGGTCGTGTTTGTGGTTTCTTCGCTGGTTTTTGGAACTCCCTTGCCTGG
ATTCTCGGTGCTGCCTCCATGTCCGCTATCCTAGGGCAGCAGACTGTCTC
CATGTATGCCCTCATGCATCCAGGCTTCGTCCCTCAGGCATGGCATATCT
TTGTGAGCTTCATCATCTGCACATGGCTTTGTTGCTGCATCGTTCTCTTC
ATGAACCGGTTTCTCCCGCATATCGGTAATCTTGGGATGTTCTTCATCTT
GGCCGGTGTGTTGATCACCATCATCGTGTGTGCGGTCATGCCCCATGTCA
AGGGCACTGGCTATGCCACAGGCAAAGATGTCTGGAGCAGTTGGGAGAAC
GACACCGGATATTCTAGTCAGGGCTTTGTCTTTGTTGCCGGTATGCTCAA
CGGAGCCTACAGTGTGGGCACCCCCGATTGCTCGTCGCATCTTGCGGAGG
AAATTCCTAGCATTGCCGTTTCGGTTTGTTACTGGCTTGTTGCAGCATCG
ATTGCTGAACTGGCATCTGGAATGCCTTCTGCGAGTGGAGACAACTGCAC
TGAGCAATGGAGGACCATCAGGTGTGATTTACGAATTATGGCCGCCGAAA
AGGAAGTAGAGAAAGTGGGAACAGCTGAGGCTGGGGATGATTCGACTTCG
ATTGAAGTGGTCAACGCCTCGGGTCACCGTCAGGAAGTCGAACGGAACTT
CAGTCTACTGAGCATTTGTGCCGTTGCTGTTACGACTGGAAATACATGGA
TTGCTCAAGGTGGCAGTGTGGCCAAGCCGTAACATTCCCAAGGCTGTCCT
GGCTCAAATGGGCGTCGGCTTCATCACCGGTGTCCTTTACATGATTGCCC
TGTTCTATTCGATCACCGATCTCAACGCAGTCATCAACAGCGTCTACGGA
TTCCCTCTCGCCGAGATTTACCGTCAAGCAACAGGATCTAGGGGTGGTGC
AATCGGTCTGCTTATCGTGGCTTTCATACCTACGGTCATCACTTGCGCTG
GTTGTTACATCACCGCTGGTCGCACTTTGTGGACTATCTCTCGTGACGGA
GCAACTCCTTTCTCTCGCTGGCTCGGACATATCAACACACGGATGCACAA
CCCTTTCAATGCCACACTGGTATGCGGTGGGATTGTCACGATTCTTGCTT
GCATCTACGTCGGATCCACCACTGCCTTTAACGCTTTCGTTGGCTGTTTC
GTGCAGCTATCCAGTCTTTCGTATTTCGCCGCCATCTTTCCGCATGTGCT
TACTCGCCGGTCCTCGTTCACACCCGGTCACTTCTGGATGGGCCGTATTG
GATATCTAATCAATATCTTGGCATGCATCTACATTCTCGCCTTTGTTGTG
ATCTTCTGTTTCCCTTACGCCTTGCCCACCGATGCCGCTTCTATGAACTA
CGCCAGTCTGATGACTGGAGGCTTGACGATCTTCGTGACTGTCTGGTGGC
TTTTCCGCATGAACACCTATGAGGGACCTAAGTCTATCCCTATGACCGAT
AAGGTGATTGTGGCCGACGCGGACTAATCTATCACTGGGCTTCCATCACA
GCAGGAAAATATGGTCGTGTTTGTGGTTTCTTCGCTGGTTTTTGGAACTC
CCTTGCCTGGATTCTCGGTGCTGCCTCCATGTCCGCTATCCTAGGGCAGC
AGACTGTCTCCATGTATGCCCTCATGCATCCAGGCTTCGTCCCTCAGGCA
TGGCATATCTTTGTGAGCTTCATCATCTGCACATGGCTTTGTTGCTGCAT
CGTTCTCTTCATGAACCGGTTTCTCCCGCATATCGGTAATCTTGGGATGT
TCTTCATCTTGGCCGGTGTGTTGATCACCATCATCGTGTGTGCGGTCATG
CCCCATGTCAAGGGCACTGGCTATGCCACAGGCAAAGATGTCTGGAGCAG
TTGGGAGAACGACACCGGATATTCTAGTCAGGGCTTTGTCTTTGTTGCCG
GTATGCTCAACGGAGCCTACAGTGTGGGCACCCCCGATTGCTCGTCGCAT
CTTGCGGAGGAAATTCCTAGCATTGCCGTTTCGGTTTGTTACTGGCTTGT
TGCAGCATCGATTGCTGAACTGGCATCTGGAATGCCTTCTGCGAGTGGAG
ACAACTGCACTGAGCAATGGAGGACCATCAGGTGTGATTTACGAATTATG
GCCGCCGAAAAGGAAGTAGAGAAAGTGGGAACAGCTGAGGCTGGGGATGA
TTCGACTTCGATTGAAGTGGTCAACGCCTCGGGTCACCGTCAGGAAGTCG
AACGGAACTTCAGTCTACTGAGCATTTGTGCCGTTGCTGTTACGACTGGA
AATACATGGATTGCTCAAGGTGGCAGTGTGGCCAAGCCGTAACATTCCCA
AGGCTGTCCTGGCTCAAATGGGCGTCGGCTTCATCACCGGTGTCCTTTAC
ATGATTGCCCTGTTCTATTCGATCACCGATCTCAACGCAGTCATCAACAG
CGTCTACGGATTCCCTCTCGCCGAGATTTACCGTCAAGCAACAGGATCTA
GGGGTGGTGCAATCGGTCTGCTTATCGTGGCTTTCATACCTACGGTCATC
ACTTGCGCTGGTTGTTACATCACCGCTGGTCGCACTTTGTGGACTATCTC
TCGTGACGGAGCAACTCCTTTCTCTCGCTGGCTCGGACATATCAACACAC
GGATGCACAACCCTTTCAATGCCACACTGGTATGCGGTGGGATTGTCACG
ATTCTTGCTTGCATCTACGTCGGATCCACCACTGCCTTTAACGCTTTCGT
TGGCTGTTTCGTGCAGCTATCCAGTCTTTCGTATTTCGCCGCCATCTTTC
CGCATGTGCTTACTCGCCGGTCCTCGTTCACACCCGGTCACTTCTGGATG
GGCCGTATTGGATATCTAATCAATATCTTGGCATGCATCTACATTCTCGC
CTTTGTTGTGATCTTCTGTTTCCCTTACGCCTTGCCCACCGATGCCGCTT
CTATGAACTACGCCAGTCTGATGACTGGAGGCTTGACGATCTTCGTGACT
GTCTGGTGGCTTTTCCGCATGAACACCTATGAGGGACCTAAGTCTATCCC
TATGACCGATAAGGTGATTGTGGCCGACGCGGACTAATCTATCACTGGGC
TTCCATCACAGCAGGAAAATATGGTCGTGTTTGTGGTTTCTTCGCTGGTT
TTTGGAACTCCCTTGCCTGGATTCTCGGTGCTGCCTCCATGTCCGCTATC
CTAGGGCAGCAGACTGTCTCCATGTATGCCCTCATGCATCCAGGCTTCGT
CCCTCAGGCATGGCATATCTTTGTGAGCTTCATCATCTGCACATGGCTTT
GTTGCTGCATCGTTCTCTTCATGAACCGGTTTCTCCCGCATATCGGTAAT
CTTGGGATGTTCTTCATCTTGGCCGGTGTGTTGATCACCATCATCGTGTG
TGCGGTCATGCCCCATGTCAAGGGCACTGGCTATGCCACAGGCAAAGATG
TCTGGAGCAGTTGGGAGAACGACACCGGATATTCTAGTCAGGGCTTTGTC
TTTGTTGCCGGTATGCTCAACGGAGCCTACAGTGTGGGCACCCCCGATTG
CTCGTCGCATCTTGCGGAGGAAATTCCTAGCATTGCCGTTTCGGTTTGTT
ACTGGCTTGTTGCAGCATCGATTGCTGAACTGGCATCTGGAATGCCTTCT
GCGAGTGGAGACAACTGCACTGAGCAATGGAGGACCATCAGGTGTGATTT
ACGAATTATGGCCGCCGAAAAGGAAGTAGAGAAAGTGGGAACAGCTGAGG
CTGGGGATGATTCGACTTCGATTGAAGTGGTCAACGCCTCGGGTCACCGT
CAGGAAGTCGAACGGAACTTCAGTCTACTGAGCATTTGTGCCGTTGCTGT
TACGACTGGAAATACATGGATTGCTCAAGGTGGCAGTGTGGCCAAGCCGT
AACATTCCCAAGGCTGTCCTGGCTCAAATGGGCGTCGGCTTCATCACCGG
TGTCCTTTACATGATTGCCCTGTTCTATTCGATCACCGATCTCAACGCAG
TCATCAACAGCGTCTACGGATTCCCTCTCGCCGAGATTTACCGTCAAGCA
ACAGGATCTAGGGGTGGTGCAATCGGTCTGCTTATCGTGGCTTTCATACC
TACGGTCATCACTTGCGCTGGTTGTTACATCACCGCTGGTCGCACTTTGT
GGACTATCTCTCGTGACGGAGCAACTCCTTTCTCTCGCTGGCTCGGACAT
ATCAACACACGGATGCACAACCCTTTCAATGCCACACTGGTATGCGGTGG
GATTGTCACGATTCTTGCTTGCATCTACGTCGGATCCACCACTGCCTTTA
ACGCTTTCGTTGGCTGTTTCGTGCAGCTATCCAGTCTTTCGTATTTCGCC
GCCATCTTTCCGCATGTGCTTACTCGCCGGTCCTCGTTCACACCCGGTCA
CTTCTGGATGGGCCGTATTGGATATCTAATCAATATCTTGGCATGCATCT
ACATTCTCGCCTTTGTTGTGATCTTCTGTTTCCCTTACGCCTTGCCCACC
GATGCCGCTTCTATGAACTACGCCAGTCTGATGACTGGAGGCTTGACGAT
CTTCGTGACTGTCTGGTGGCTTTTCCGCATGAACACCTATGAGGGACCTA
AGTCTATCCCTATGACCGATAAGGTGATTGTGGCCGACGCGGACTAATCT
ATCACTGGGCTTCCATCACAGCAGGAAAATATGGTCGTGTTTGTGGTTTC
TTCGCTGGTTTTTGGAACTCCCTTGCCTGGATTCTCGGTGCTGCCTCCAT
GTCCGCTATCCTAGGGCAGCAGACTGTCTCCATGTATGCCCTCATGCATC
CAGGCTTCGTCCCTCAGGCATGGCATATCTTTGTGAGCTTCATCATCTGC
ACATGGCTTTGTTGCTGCATCGTTCTCTTCATGAACCGGTTTCTCCCGCA
TATCGGTAATCTTGGGATGTTCTTCATCTTGGCCGGTGTGTTGATCACCA
TCATCGTGTGTGCGGTCATGCCCCATGTCAAGGGCACTGGCTATGCCACA
GGCAAAGATGTCTGGAGCAGTTGGGAGAACGACACCGGATATTCTAGTCA
GGGCTTTGTCTTTGTTGCCGGTATGCTCAACGGAGCCTACAGTGTGGGCA
CCCCCGATTGCTCGTCGCATCTTGCGGAGGAAATTCCTAGCATTGCCGTT
TCGGTTTGTTACTGGCTTGTTGCAGCATCGATTGCTGAACTGGCATCTGG
AATGCCTTCTGCGAGTGGAGACAACTGCACTGAGCAATGGAGGACCATCA
GGTGTGATTTACGAATTATGGCCGCCGAAAAGGAAGTAGAGAAAGTGGGA
ACAGCTGAGGCTGGGGATGATTCGACTTCGATTGAAGTGGTCAACGCCTC
GGGTCACCGTCAGGAAGTCGAACGGAACTTCAGTCTACTGAGCATTTGTG
CCGTTGCTGTTACGACTGGAAATACATGGATTGCTCAAGGTGGCAGTGTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006865 | amino acid transport |
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR004840 |
| DBxref | InterPro:IPR002293 |
| DBxref | PFAM:PF13520 |
| DBxref | PFAM:PF00324 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3173022..3174808 - |
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