You are here

Home

CBS51388_001086-T1, CBS51388_001086-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001086-T1
Unique NameCBS51388_001086-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3231169..3233761+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001086-T1 ID=CBS51388_001086-T1|Name=CBS51388_001086-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2593bp|location=Sequence derived from alignment at An01:3231169..3233761+ (Aspergillus niger CBS 513.88)
ATGTATCTCCCCCGCCAACTCATCTCCCACCTCTACCAACAACTCCTCCG
CTCACACCACCCGCTCTCCCCGCCCGTTCTGATCCTCGTGGCTCTCGAGC
CCGATGCCCTCTGTGCCTGTCGAATTCTCACTGCGCTCCTGAAACGCGAC
TACATCCCGCACAAAATCCAGCCGGTAGCCGGATATGGCGATCTGGCGCG
CGCAGGCGAGGAATTGGTTAAGCCCATGCGGACGAACAATGGCGGGAGTG
GTGGAGTAGTTGTATGTTTGGGGGTGGGAGGCCTTGTGGATCTGAGCGAG
ATATTATGCTTGAGCACTGAAGAGGAAGATGAGGAAGAGGACATGGGCGG
GGTTGAGGTGTGGGTTTTCGATGCTAGGCGGCCGTGGAACCTAGCTAATG
TGTTTGGGGGTGAGGGGCGGCCGTCTGCGGCGGCTGATGCTATGGGGGTT
ATGAACCTGGGTGCGAGACGGGGGTCGCGCGGTGTTGAGAAGGGGTGTAT
TACGTCGGCGTATACGTCCGGCAATGGGGGCATTGTGGTCTACGATGATG
GGGATATTGAGGAGGAGTTGGGGAAGGAACGGGAGGCGTATTGTGAGTTG
GTGGCTATGCCCGAGGTGGGTGAAGAGGATGAGGACGAGGACGAGGATGG
CGACTCGGGGAGTGATCGCGATGAGGATCATCCTTCGAGTTCCGACTCGA
AGAAACGCAAGTCGTGGTCGCGTGAGGATGAGGACGACGAGTCGGATGAT
GAAGATGGGCCTCCGCGTCAGCGGAGAAGGAGTGATTCGGTGTGTAGAAT
TCGTTCCTGTTGTGCGGAGGGTGGTGCTAATATGCTCATTGTAGGGCTCC
TATATTATTTCGTCGCCGTCACGTCCTCCGCGGAGAGCTATTCATGATTC
ATCCAATTCGTCTCGCTCTGTTACGCCGACATCAGATTCACCGTCGCCGG
TACAGCCCAAGCCCCCGTCAGCGCGCACACTACGACGACGATTGCTGCGC
ATGAAAAGGAAGCACGAAAATGTGCTGCAGAGTTACTATTCGTCAGGGAC
GTCGTACTCGGAACCGATCTCCTCCATTGTCTATTCCCTTGCGTCCGAGC
TCGGTCGTGAAGACAACGATCTGCTGTGGCTGGCCATTGTGGGTGTCTCG
AGCTTGGAACTGAGTGGCCGTACCATGTCTGGAGTGGGTGTGTCGAATGC
GTTGGAGTACGGAGGCTCGGCTGGCTGGGGTGGAGAGAGGGGTGAACGAA
TACGGCAGATCCTACGCGACGAAGTTCTGCGATTAAACCCTCCCGATCCG
TATGAGCGAGATCGCGATAGCAGAGGAGAAATCAACGGCGTCATCCCGAC
CACGGCACGGTCTCCGACGGACAAATCGATTCGGCTATCGCCTGAACCGC
GTTTCATCCTCGTACGGCATTGGTCGCTCTACGACAGTATGCTACACAGC
CCGTACCTAGCATCCAGGCTTCATGTGTGGACGGAGAACGGAAAGAAACG
ACTACATAAACTGCTAGCCAAGATGGGCATCAGCTTGAACCAGAGCCATC
AAAACTATACCCATATGGACATGGAACTGAAGCGAGTATTACGACAACGC
CTCTTGAAGTATGCACCAATGTACGGCTTGGACGGACTTGTTCCGCCGGA
GGCATCTGGGCATGCCATCTCTCGCGAAGGATGGGGATTTGTGCGCTGTT
GGGGCTGGAAAGCTTGCCTCTCTGCCACCGATGTGGGTGTTATCATCGGT
GCAATCCTTGAAGTCGGGCCTGAAGAAGCCCCCGGAGTGTGGGATGCCAA
ACGCGCGTCCAGAACGGCTACAACATCCAATGCCGACGGGTCCACCGAGT
CAGATCTGGCCAGCCTGCTACCCCGGTTTTGGAGCGCCTACGACGCTCTG
TCATTGACTTCGGAGTCGCCGACGCTCCTGCTGTCATCTCTCCCTCTCGC
CCAGCACCTGCACCGGGCTATCCTTCGCACTGGTACTTCTCTACTTGCGA
AGCACCAGATCCGTCATCTGCGAGCGTTCCGCATCGCCGTTGTCAAAGAT
GGTCCGGACGTGAAGCTCTTCACCAATCCGGGGGCATTAACAAAATTGGC
CTTGTGGGTTGCTGAGGCGATCCGGGTACAAGAGAGGGAACGAGGAGACT
CCGTCAAGGTAGGACGTAGGCGGGCCCTGGGCACGCCGCTTGTTCTGGCC
GGCCTTGACGAGGACCGGGGCTTGTATGTGGTCGTGGGTACCGGGGGAGG
TGGTGGAGTGGTCGACTTTGCCGCCCTCGCCAAACGGCGAGAGGAACGAA
GGAAGAAGAAAGAAGCCAAGGAGAATAAGCGCAAGGAGCGGGAGGAGCGT
CGGGCGAAGCGCGCTGCCGAGCGCGCTGCCAACGGTGAAGACGACGATGA
AGAGGAGGAGACGGAGGACTCGTCGTCTGAATCCGAGTCCGAGTCTGAAG
ATGAAGAGGACCTGCGCAGCAATAAGCATCTTTTGCGAAATAGGTTTGGA
ATTGCGTTCCAGGAAGTGGTGCAAGAAACCAGTGCTCGAGTACGCATCGA
TAGCTTGAGCACTGCGTGGTGGAGGTACAGAAGGAAGACTTAG
back to top

Coding sequence (CDS) from alignment at An01:3231169..3233761+

>CBS51388_001086-T1 ID=CBS51388_001086-T1|Name=CBS51388_001086-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5076bp|location=Sequence derived from alignment at An01:3231169..3233761+ (Aspergillus niger CBS 513.88)
ATGTATCTCCCCCGCCAACTCATCTCCCACCTCTACCAACAACTCCTCCG
CTCACACCACCCGCTCTCCCCGCCCGTTCTGATCCTCGTGGCTCTCGAGC
CCGATGCCCTCTGTGCCTGTCGAATTCTCACTGCGCTCCTGAAACGCGAC
TACATCCCGCACAAAATCCAGCCGGTAGCCGGATATGGCGATCTGGCGCG
CGCAGGCGAGGAATTGGTTAAGCCCATGCGGACGAACAATGGCGGGAGTG
GTGGAGTAGTTGTATGTTTGGGGGTGGGAGGCCTTGTGGATCTGAGCGAG
ATATTATGCTTGAGCACTGAAGAGGAAGATGAGGAAGAGGACATGGGCGG
GGTTGAGGTGTGGGTTTTCGATGCTAGGCGGCCGTGGAACCTAGCTAATG
TGTTTGGGGGTGAGGGGCGGCCGTCTGCGGCGGCTGATGCTATGGGGGTT
ATGAACCTGGGTGCGAGACGGGGGTCGCGCGGTGTTGAGAAGGGGTGTAT
TACGTCGGCGTATACGTCCGGCAATGGGGGCATTGTGGTCTACGATGATG
GGGATATTGAGGAGGAGTTGGGGAAGGAACGGGAGGCGTATTGTGAGTTG
GTGGCTATGCCCGAGGTGGGTGAAGAGGATGAGGACGAGGACGAGGATGG
CGACTCGGGGAGTGATCGCGATGAGGATCATCCTTCGAGTTCCGACTCGA
AGAAACGCAAGTCGTGGTCGCGTGAGGATGAGGACGACGAGTCGGATGAT
GAAGATGGGCCTCCGCGTCAGCGGAGAAGGAGTGATTCGGGCTCCTATAT
TATTTCGTCGCCGTCACGTCCTCCGCGGAGAGCTATTCATGATTCATCCA
ATTCGTCTCGCTCTGTTACGCCGACATCAGATTCACCGTCGCCGGTACAG
CCCAAGCCCCCGTCAGCGCGCACACTACGACGACGATTGCTGCGCATGAA
AAGGAAGCACGAAAATGTGCTGCAGAGTTACTATTCGTCAGGGACGTCGT
ACTCGGAACCGATCTCCTCCATTGTCTATTCCCTTGCGTCCGAGCTCGGT
CGTGAAGACAACGATCTGCTGTGGCTGGCCATTGTGGGTGTCTCGAGCTT
GGAACTGAGTGGCCGTACCATGTCTGGAGTGGGTGTGTCGAATGCGTTGG
AGTACGGAGGCTCGGCTGGCTGGGGTGGAGAGAGGGGTGAACGAATACGG
CAGATCCTACGCGACGAAGTTCTGCGATTAAACCCTCCCGATCCGTATGA
GCGAGATCGCGATAGCAGAGGAGAAATCAACGGCGTCATCCCGACCACGG
CACGGTCTCCGACGGACAAATCGATTCGGCTATCGCCTGAACCGCGTTTC
ATCCTCGTACGGCATTGGTCGCTCTACGACAGTATGCTACACAGCCCGTA
CCTAGCATCCAGGCTTCATGTGTGGACGGAGAACGGAAAGAAACGACTAC
ATAAACTGCTAGCCAAGATGGGCATCAGCTTGAACCAGAGCCATCAAAAC
TATACCCATATGGACATGGAACTGAAGCGAGTATTACGACAACGCCTCTT
GAAGTATGCACCAATGTACGGCTTGGACGGACTTGTTCCGCCGGAGGCAT
CTGGGCATGCCATCTCTCGCGAAGGATGGGGATTTGTGCGCTGTTGGGGC
TGGAAAGCTTGCCTCTCTGCCACCGATGTGGGTGTTATCATCGGTGCAAT
CCTTGAAGTCGGGCCTGAAGAAGCCCCCGGAGTGTGGGATGCCAAACGCG
CGTCCAGAACGGCTACAACATCCAATGCCGACGGGTCCACCGAGTCAGAT
CTGGCCAGCCTGCTACCCCGGTTTTGGAGCGCCTACGACGCTCTGTCATT
GACTTCGGAGTCGCCGACGCTCCTGCTGTCATCTCTCCCTCTCGCCCAGC
ACCTGCACCGGGCTATCCTTCGCACTGGTACTTCTCTACTTGCGAAGCAC
CAGATCCGTCATCTGCGAGCGTTCCGCATCGCCGTTGTCAAAGATGGTCC
GGACGTGAAGCTCTTCACCAATCCGGGGGCATTAACAAAATTGGCCTTGT
GGGTTGCTGAGGCGATCCGGGTACAAGAGAGGGAACGAGGAGACTCCGTC
AAGGTAGGACGTAGGCGGGCCCTGGGCACGCCGCTTGTTCTGGCCGGCCT
TGACGAGGACCGGGGCTTGTATGTGGTCGTGGGTACCGGGGGAGGTGGTG
GAGTGGTCGACTTTGCCGCCCTCGCCAAACGGCGAGAGGAACGAAGGAAG
AAGAAAGAAGCCAAGGAGAATAAGCGCAAGGAGCGGGAGGAGCGTCGGGC
GAAGCGCGCTGCCGAGCGCGCTGCCAACGGTGAAGACGACGATGAAGAGG
AGGAGACGGAGGACTCGTCGTCTGAATCCGAGTCCGAGTCTGAAGATGAA
GAGGACCTGCGCAGCAATAAGCATCTTTTGCGAAATAGGTTTGGAATTGC
GTTCCAGGAAGTGGTGCAAGAAACCAGTGCTCGAGTACGCATCGATAGCT
TGAGCACTGCGTGGTGGAGGTACAGAAGGAAGACTTAGATGTATCTCCCC
CGCCAACTCATCTCCCACCTCTACCAACAACTCCTCCGCTCACACCACCC
GCTCTCCCCGCCCGTTCTGATCCTCGTGGCTCTCGAGCCCGATGCCCTCT
GTGCCTGTCGAATTCTCACTGCGCTCCTGAAACGCGACTACATCCCGCAC
AAAATCCAGCCGGTAGCCGGATATGGCGATCTGGCGCGCGCAGGCGAGGA
ATTGGTTAAGCCCATGCGGACGAACAATGGCGGGAGTGGTGGAGTAGTTG
TATGTTTGGGGGTGGGAGGCCTTGTGGATCTGAGCGAGATATTATGCTTG
AGCACTGAAGAGGAAGATGAGGAAGAGGACATGGGCGGGGTTGAGGTGTG
GGTTTTCGATGCTAGGCGGCCGTGGAACCTAGCTAATGTGTTTGGGGGTG
AGGGGCGGCCGTCTGCGGCGGCTGATGCTATGGGGGTTATGAACCTGGGT
GCGAGACGGGGGTCGCGCGGTGTTGAGAAGGGGTGTATTACGTCGGCGTA
TACGTCCGGCAATGGGGGCATTGTGGTCTACGATGATGGGGATATTGAGG
AGGAGTTGGGGAAGGAACGGGAGGCGTATTGTGAGTTGGTGGCTATGCCC
GAGGTGGGTGAAGAGGATGAGGACGAGGACGAGGATGGCGACTCGGGGAG
TGATCGCGATGAGGATCATCCTTCGAGTTCCGACTCGAAGAAACGCAAGT
CGTGGTCGCGTGAGGATGAGGACGACGAGTCGGATGATGAAGATGGGCCT
CCGCGTCAGCGGAGAAGGAGTGATTCGGGCTCCTATATTATTTCGTCGCC
GTCACGTCCTCCGCGGAGAGCTATTCATGATTCATCCAATTCGTCTCGCT
CTGTTACGCCGACATCAGATTCACCGTCGCCGGTACAGCCCAAGCCCCCG
TCAGCGCGCACACTACGACGACGATTGCTGCGCATGAAAAGGAAGCACGA
AAATGTGCTGCAGAGTTACTATTCGTCAGGGACGTCGTACTCGGAACCGA
TCTCCTCCATTGTCTATTCCCTTGCGTCCGAGCTCGGTCGTGAAGACAAC
GATCTGCTGTGGCTGGCCATTGTGGGTGTCTCGAGCTTGGAACTGAGTGG
CCGTACCATGTCTGGAGTGGGTGTGTCGAATGCGTTGGAGTACGGAGGCT
CGGCTGGCTGGGGTGGAGAGAGGGGTGAACGAATACGGCAGATCCTACGC
GACGAAGTTCTGCGATTAAACCCTCCCGATCCGTATGAGCGAGATCGCGA
TAGCAGAGGAGAAATCAACGGCGTCATCCCGACCACGGCACGGTCTCCGA
CGGACAAATCGATTCGGCTATCGCCTGAACCGCGTTTCATCCTCGTACGG
CATTGGTCGCTCTACGACAGTATGCTACACAGCCCGTACCTAGCATCCAG
GCTTCATGTGTGGACGGAGAACGGAAAGAAACGACTACATAAACTGCTAG
CCAAGATGGGCATCAGCTTGAACCAGAGCCATCAAAACTATACCCATATG
GACATGGAACTGAAGCGAGTATTACGACAACGCCTCTTGAAGTATGCACC
AATGTACGGCTTGGACGGACTTGTTCCGCCGGAGGCATCTGGGCATGCCA
TCTCTCGCGAAGGATGGGGATTTGTGCGCTGTTGGGGCTGGAAAGCTTGC
CTCTCTGCCACCGATGTGGGTGTTATCATCGGTGCAATCCTTGAAGTCGG
GCCTGAAGAAGCCCCCGGAGTGTGGGATGCCAAACGCGCGTCCAGAACGG
CTACAACATCCAATGCCGACGGGTCCACCGAGTCAGATCTGGCCAGCCTG
CTACCCCGGTTTTGGAGCGCCTACGACGCTCTGTCATTGACTTCGGAGTC
GCCGACGCTCCTGCTGTCATCTCTCCCTCTCGCCCAGCACCTGCACCGGG
CTATCCTTCGCACTGGTACTTCTCTACTTGCGAAGCACCAGATCCGTCAT
CTGCGAGCGTTCCGCATCGCCGTTGTCAAAGATGGTCCGGACGTGAAGCT
CTTCACCAATCCGGGGGCATTAACAAAATTGGCCTTGTGGGTTGCTGAGG
CGATCCGGGTACAAGAGAGGGAACGAGGAGACTCCGTCAAGGTAGGACGT
AGGCGGGCCCTGGGCACGCCGCTTGTTCTGGCCGGCCTTGACGAGGACCG
GGGCTTGTATGTGGTCGTGGGTACCGGGGGAGGTGGTGGAGTGGTCGACT
TTGCCGCCCTCGCCAAACGGCGAGAGGAACGAAGGAAGAAGAAAGAAGCC
AAGGAGAATAAGCGCAAGGAGCGGGAGGAGCGTCGGGCGAAGCGCGCTGC
CGAGCGCGCTGCCAACGGTGAAGACGACGATGAAGAGGAGGAGACGGAGG
ACTCGTCGTCTGAATCCGAGTCCGAGTCTGAAGATGAAGAGGACCTGCGC
AGCAATAAGCATCTTTTGCGAAATAGGTTTGGAATTGCGTTCCAGGAAGT
GGTGCAAGAAACCAGTGCTCGAGTACGCATCGATAGCTTGAGCACTGCGT
GGTGGAGGTACAGAAGGAAGACTTAG
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006270DNA replication initiation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001086CBS51388_001086Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001086-T1.exon1CBS51388_001086-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001086-T1.exon2CBS51388_001086-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001086-T1.cdsCBS51388_001086-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001086-T1CBS51388_001086-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteBUSCO:EOG0926129I
DBxrefInterPro:IPR003874
DBxrefPFAM:PF02724
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3231169..3233761 +
Powered by Drupal