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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3251802..3252849+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001094-T1 ID=CBS51388_001094-T1|Name=CBS51388_001094-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1048bp|location=Sequence derived from alignment at An01:3251802..3252849+ (Aspergillus niger CBS 513.88)
ATGTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTCCGTCTT
CTCTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCAGTAAGTCC
AGGAGTCTCCCTATCCCCGACGGTCATCGATCCACGGGGGGTCGGTGCCG
GCGACCCCACGGTTAACCCTTGCGCATACTAACATCAGGCAGTAGCTGCA
GGATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAGCGTTTAGC
CAAACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAGAAACAAGC
CTCCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTCGCAGCCAC
CGAACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCGGTGAGAGC
TTGAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGCCGACCGGC
CGCCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCGTCCGATTG
CGCTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACTTGGCACCG
TTCAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTCACGGTCGG
AATTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAACCTGGCGG
AGACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTGTCGAAGCT
GCCAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAATGGGAAGT
CTCCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGCCCGTGTGA
AAGAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCAAGGAGTTC
GAGAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCAATAATCGA
GGGTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGACAAGAGCA
TTGTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAGGCATTTCG
TACGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAGTTCTAG back to topCoding sequence (CDS) from alignment at An01:3251802..3252849+ >CBS51388_001094-T1 ID=CBS51388_001094-T1|Name=CBS51388_001094-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1896bp|location=Sequence derived from alignment at An01:3251802..3252849+ (Aspergillus niger CBS 513.88)
ATGTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTCCGTCTT
CTCTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCATAGCTGCA
GGATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAGCGTTTAGC
CAAACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAGAAACAAGC
CTCCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTCGCAGCCAC
CGAACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCGGTGAGAGC
TTGAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGCCGACCGGC
CGCCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCGTCCGATTG
CGCTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACTTGGCACCG
TTCAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTCACGGTCGG
AATTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAACCTGGCGG
AGACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTGTCGAAGCT
GCCAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAATGGGAAGT
CTCCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGCCCGTGTGA
AAGAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCAAGGAGTTC
GAGAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCAATAATCGA
GGGTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGACAAGAGCA
TTGTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAGGCATTTCG
TACGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAGTTCTAGAT
GTCAGGACAAAAAAGTGTCCTTGCCATCCTCATGCGACGCTCCGTCTTCT
CTACCGTTTCCTTTGCTTTCAAGCAACCTGTCAAGTTTCATAGCTGCAGG
ATCCCATCTCGTCGCCTAAACCTCTACAGCCCCTCTCGAGCGTTTAGCCA
AACATCCACCATGTTCAAAGTCGGTGACGATTTTGAAAAGAAACAAGCCT
CCCGGCCAGAGTTCAAGCGTGACGTCCCCGTCACTTTCTCGCAGCCACCG
AACCCCAGCTGGAAACAGGGAGAGGGCGCCAACGATGGCGGTGAGAGCTT
GAAAAAAAACCACATCGAGATCGACCCTTACGAAGAAGGCCGACCGGCCG
CCTCCAACTATAAGCTGTTGATCTCGGGCATAGTCCCTCGTCCGATTGCG
CTCATTAGCACAAAGTCCAAAGATGGAAAGACGACAAACTTGGCACCGTT
CAGTTATTCGAATGTCATTAACCATGACCCTCCGCTCTTCACGGTCGGAA
TTGTTGGCTCCCTGGACAAGGCCAAAGACACACTGAAGAACCTGGCGGAG
ACGGAGGAGTGTGTGATCAACATCATCTCGGAGCATTTTGTCGAAGCTGC
CAATGCGACGGCCATCAACGCTCCCTATGGAGTGTCCGAATGGGAAGTCT
CCGGGCTCACCCAAGCACCCAGTGCCGTTGTTCAGGCGGCCCGTGTGAAA
GAGTCCATCCTGGCGATCGAAGGCAAGCTGGTGGAAACCAAGGAGTTCGA
GAGCCGGTCTACTCCTGGCAAGAAATCCGGAGTGTTGGCAATAATCGAGG
GTGTTCGTTTCTGGGTGAGAGATGATGCGATCAACGAAGACAAGAGCATT
GTCGATCTGAAAGTGCTGAAGCCTATTAGTCGGCTGGGAGGCATTTCGTA
CGGGCGGACCACCGACGCAATCGAAATTCCAAGACCGCAGTTCTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0010181 | FMN binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR012349 |
| DBxref | InterPro:IPR002563 |
| DBxref | PFAM:PF01613 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3251802..3252849 + |
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