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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3352628..3353620+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001127-T1 ID=CBS51388_001127-T1|Name=CBS51388_001127-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=993bp|location=Sequence derived from alignment at An01:3352628..3353620+ (Aspergillus niger CBS 513.88)
ATGATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGTCTGTA
TCACCTATCCCACTTTACCCCTCAAGCAAACTGACTGATATTCTACACAG
GCATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAA
CTCGCTATCGCTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGA
TATTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACG
TGACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAA
TTTGAGAGAATTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAAT
GGCGTATTCGGGGGACCATGAGATTGCAGATTGGGAGAAGACGTTAGGGG
TGAATTTGCATGGGGTGTGGATGTCCAGTCGGGAGGAGATTAAGGTTATG
ATGGGACAGGAGAAGAGGGATGATAGGTGAGGCTTTTTTCTATTTAATAT
TCTGAGATGGTGATGATGATGGAGTTCGGTCAGTGCTAATGTGTGATGTG
TGCACTTGCTTGTTCTACAGTCCTCGCTCATCACGAGGTGTCATTGTCAA
CGTGGCATCTGCTTATGGTCTTGTTGCGACGCCGGCCAATATACCCCTCG
TTTCTTATACGGCTGCAAAACATGGTGTGGTTGGGATGAGCAAGGCTGAT
GCGATTGTCTACGCGCCTTTGGGAATTCGGATCAATGCTATCTGTCCTGG
TTATGTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGA
AAGAAGTGTTGAGAGTCCCGGTGGGAAGATTGGCGGATGTAGAGGAAATT
GCGGATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGG
GTCTGCGTTGGTGGTGGATGGGTAGGTCGATTTCTTGAAGGTTTTGCTGG
AGGACTTAATGCTGACAGTTATAGGGGGTTTATCGCGCAGTAA back to topCoding sequence (CDS) from alignment at An01:3352628..3353620+ >CBS51388_001127-T1 ID=CBS51388_001127-T1|Name=CBS51388_001127-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3156bp|location=Sequence derived from alignment at An01:3352628..3353620+ (Aspergillus niger CBS 513.88)
ATGATGCTCCAGGGAGTCGCCTTCATCACCGGTGCCGCATCAGGCATCGG
AAAAGCCACAGCCTATGCCCTCGCCCGACACGGTGTCAGCCAACTCGCTA
TCGCTGATATCAACTTCGCCGCGGCACAGGATACCGCCCAGGATATTGAG
GCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGACCGA
TCCGGTCTCTATCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTTGAGA
GAATTGATTATGCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGCGTAT
TCGGGGGACCATGAGATTGCAGATTGGGAGAAGACGTTAGGGGTGAATTT
GCATGGGGTGTGGATGTCCAGTCGGGAGGAGATTAAGGTTATGATGGGAC
AGGAGAAGAGGGATGATAGTCCTCGCTCATCACGAGGTGTCATTGTCAAC
GTGGCATCTGCTTATGGTCTTGTTGCGACGCCGGCCAATATACCCCTCGT
TTCTTATACGGCTGCAAAACATGGTGTGGTTGGGATGAGCAAGGCTGATG
CGATTGTCTACGCGCCTTTGGGAATTCGGATCAATGCTATCTGTCCTGGT
TATGTTCAGACACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAA
AGAAGTGTTGAGAGTCCCGGTGGGAAGATTGGCGGATGTAGAGGAAATTG
CGGATACGATTACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGG
TCTGCGTTGGTGGTGGATGGGGGGTTTATCGCGCAGTAAATGATGCTCCA
GGGAGTCGCCTTCATCACCGGTGCCGCATCAGGCATCGGAAAAGCCACAG
CCTATGCCCTCGCCCGACACGGTGTCAGCCAACTCGCTATCGCTGATATC
AACTTCGCCGCGGCACAGGATACCGCCCAGGATATTGAGGCCCGCTTCAG
TGGAGTGAGAGTGCTGCCGCTGAACATTGACGTGACCGATCCGGTCTCTA
TCCACAAGGCTGTGTCAGAGACGGTTCAGCAATTTGAGAGAATTGATTAT
GCGGTCAATAGTGCTGGGATTGCTGGGTCAATGGCGTATTCGGGGGACCA
TGAGATTGCAGATTGGGAGAAGACGTTAGGGGTGAATTTGCATGGGGTGT
GGATGTCCAGTCGGGAGGAGATTAAGGTTATGATGGGACAGGAGAAGAGG
GATGATAGTCCTCGCTCATCACGAGGTGTCATTGTCAACGTGGCATCTGC
TTATGGTCTTGTTGCGACGCCGGCCAATATACCCCTCGTTTCTTATACGG
CTGCAAAACATGGTGTGGTTGGGATGAGCAAGGCTGATGCGATTGTCTAC
GCGCCTTTGGGAATTCGGATCAATGCTATCTGTCCTGGTTATGTTCAGAC
ACCGATGATCGATCAGATGGCTGATGAGGTGATGCGGAAAGAAGTGTTGA
GAGTCCCGGTGGGAAGATTGGCGGATGTAGAGGAAATTGCGGATACGATT
ACGTTCATGCTGTCGCCGATGAGTAGCTATATGTATGGGTCTGCGTTGGT
GGTGGATGGGGGGTTTATCGCGCAGTAAATGATGCTCCAGGGAGTCGCCT
TCATCACCGGTGCCGCATCAGGCATCGGAAAAGCCACAGCCTATGCCCTC
GCCCGACACGGTGTCAGCCAACTCGCTATCGCTGATATCAACTTCGCCGC
GGCACAGGATACCGCCCAGGATATTGAGGCCCGCTTCAGTGGAGTGAGAG
TGCTGCCGCTGAACATTGACGTGACCGATCCGGTCTCTATCCACAAGGCT
GTGTCAGAGACGGTTCAGCAATTTGAGAGAATTGATTATGCGGTCAATAG
TGCTGGGATTGCTGGGTCAATGGCGTATTCGGGGGACCATGAGATTGCAG
ATTGGGAGAAGACGTTAGGGGTGAATTTGCATGGGGTGTGGATGTCCAGT
CGGGAGGAGATTAAGGTTATGATGGGACAGGAGAAGAGGGATGATAGTCC
TCGCTCATCACGAGGTGTCATTGTCAACGTGGCATCTGCTTATGGTCTTG
TTGCGACGCCGGCCAATATACCCCTCGTTTCTTATACGGCTGCAAAACAT
GGTGTGGTTGGGATGAGCAAGGCTGATGCGATTGTCTACGCGCCTTTGGG
AATTCGGATCAATGCTATCTGTCCTGGTTATGTTCAGACACCGATGATCG
ATCAGATGGCTGATGAGGTGATGCGGAAAGAAGTGTTGAGAGTCCCGGTG
GGAAGATTGGCGGATGTAGAGGAAATTGCGGATACGATTACGTTCATGCT
GTCGCCGATGAGTAGCTATATGTATGGGTCTGCGTTGGTGGTGGATGGGG
GGTTTATCGCGCAGTAAATGATGCTCCAGGGAGTCGCCTTCATCACCGGT
GCCGCATCAGGCATCGGAAAAGCCACAGCCTATGCCCTCGCCCGACACGG
TGTCAGCCAACTCGCTATCGCTGATATCAACTTCGCCGCGGCACAGGATA
CCGCCCAGGATATTGAGGCCCGCTTCAGTGGAGTGAGAGTGCTGCCGCTG
AACATTGACGTGACCGATCCGGTCTCTATCCACAAGGCTGTGTCAGAGAC
GGTTCAGCAATTTGAGAGAATTGATTATGCGGTCAATAGTGCTGGGATTG
CTGGGTCAATGGCGTATTCGGGGGACCATGAGATTGCAGATTGGGAGAAG
ACGTTAGGGGTGAATTTGCATGGGGTGTGGATGTCCAGTCGGGAGGAGAT
TAAGGTTATGATGGGACAGGAGAAGAGGGATGATAGTCCTCGCTCATCAC
GAGGTGTCATTGTCAACGTGGCATCTGCTTATGGTCTTGTTGCGACGCCG
GCCAATATACCCCTCGTTTCTTATACGGCTGCAAAACATGGTGTGGTTGG
GATGAGCAAGGCTGATGCGATTGTCTACGCGCCTTTGGGAATTCGGATCA
ATGCTATCTGTCCTGGTTATGTTCAGACACCGATGATCGATCAGATGGCT
GATGAGGTGATGCGGAAAGAAGTGTTGAGAGTCCCGGTGGGAAGATTGGC
GGATGTAGAGGAAATTGCGGATACGATTACGTTCATGCTGTCGCCGATGA
GTAGCTATATGTATGGGTCTGCGTTGGTGGTGGATGGGGGGTTTATCGCG
CAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR002347 |
| DBxref | PFAM:PF08659 |
| DBxref | PFAM:PF13561 |
| DBxref | PFAM:PF00106 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3352628..3353620 + |
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