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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3384748..3386187- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001139-T1 ID=CBS51388_001139-T1|Name=CBS51388_001139-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1440bp|location=Sequence derived from alignment at An01:3384748..3386187- (Aspergillus niger CBS 513.88)
ATGCCCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGA
GGTGAGTCCGCGCTGAGCCTATACCCATGTACAGCTCCGGACAATCGACT
GACCCATTGCCAATGTCCATATAGGTTACCGCCGAGGCCATCAAGGTTAG
CAAACCACGCCCAGCTACGAATTGAGCTCCGAAAGTTCCCCAAATACTAA
TTCTGCTCCGCTATAGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACA
TCACCCTCAACCTCCAGGACCACCTGCTGGGCGGTGTACGTCCCATCCAA
ATCCCATCTATAGAAGACCATAAACCGCTGATACAGCTACATAGGCCTCC
ATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCGCGGCCAA
GAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGGTACACTCCC
CCGATCTATCCTCCACCCCCATCCTCATCACCACCAACAACAACTAACCC
AACCAACAGAAATGGGGCACCGGCGCCGTCCGCCCGGAGCAGGGTCTCCT
CAAGCTTCGCAAAGAGATGGGCACATTCGGCAACCTGCGTCCCTGCAACT
TCGCGGCCCCCTCCTTGGTCGAACACTCCCCCCTGAAAGCCTCCGTCTGC
GAGGGCGTCGACTTCAACATCATCCGCGAACTGACGGGCGGAATCTACTT
CGGTGACCGCAAGGAAGATGACGGCAGCGGCTACGCCATGGACACGGAGC
CGTACTCGCGCGCCGAGATCGAGCGGATCACGCGCCTCGCGGCCCACCTT
GCTCTGCAGCACAACCCCCCTCTCCCCGTGTGGAGTCTGGATAAGGCCAA
CGTGCTGGCTACGAGTCGGTTGTGGAGGAAGACCGTCACCGAGATCATGG
CGAAGGAGTTCCCACAGTTGAAGATTGAGCACCAGCTTATTGATTCTGCG
GCTATGATTATGGTTAAGAACCCCCGTCAGCTGAACGGCATTATTGTCAC
GAGTAACCTGTTCGGTGATATCATTAGTGATGAGGCTAGTGTTATTCCTG
GTTCTCTGGGATTGTTGCCTAGTGCTAGTTTGAGTGGTATCCCTGATGGT
AAGGGTAGGGTTAATGGTATTTATGAGCCTATTCATGGTATGTTGTTTCC
CTCTTTCTCACTTTTTTTTGGGTCGTGGTGGAAGTGCGGTTTGCTAACTG
GGTTCAGGCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGT
CGCTGCTATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCT
TCGATGAGGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCC
GGTGTCCGTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGG
TGATGCCGTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAG back to topCoding sequence (CDS) from alignment at An01:3384748..3386187- >CBS51388_001139-T1 ID=CBS51388_001139-T1|Name=CBS51388_001139-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6588bp|location=Sequence derived from alignment at An01:3384748..3386187- (Aspergillus niger CBS 513.88)
GCTCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCT
ATCCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGA
GGCCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCC
GTACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCC
GTTGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGC
CGTCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACAT
TCGGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACAC
TCCCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCG
CGAACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCA
GCGGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGG
ATCACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCC
CGTGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGA
GGAAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATT
GAGCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCG
TCAGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTA
GTGATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCT
AGTTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGA
GCCTATTCATGGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAG
GCCCTGGCCGCGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGG
TGGACCGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCA
ACCTCCAGGACCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATG
CCCGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGC
TCTGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCTAT
CCTGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGAGG
CCCGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCCGT
ACCGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCCGT
TGCGGCCGAGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGCCG
TCCGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTC
GGCAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTC
CCCCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCG
AACTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGC
GGCTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGAT
CACGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCG
TGTGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGG
AAGACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGA
GCACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTC
AGCTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGT
GATGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAG
TTTGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGC
CTATTCATGGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAGGC
CCTGGCCGCGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTG
GACCGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCAAC
CTCCAGGACCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATGCC
CGCCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGCTC
TGCCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCTATCC
TGTCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGAGGCC
CGCGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCCGTAC
CGGTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCCGTTG
CGGCCGAGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGCCGTC
CGCCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGG
CAACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCC
CCCTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAA
CTGACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGG
CTACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCA
CGCGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTG
TGGAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAA
GACCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGC
ACCAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAG
CTGAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGA
TGAGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTT
TGAGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCT
ATTCATGGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCC
TGGCCGCGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGA
CCGGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCAACCT
CCAGGACCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATGCCCG
CCTACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGCTCTG
CCCCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCTATCCTG
TCCGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGAGGCCCG
CGCTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCCGTACCG
GTGACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCCGTTGCG
GCCGAGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGCCGTCCG
CCCGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGGCA
ACCTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCCCC
CTGAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAACT
GACGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGGCT
ACGCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCACG
CGCCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTGTG
GAGTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAAGA
CCGTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGCAC
CAGCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAGCT
GAACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGATG
AGGCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTTTG
AGTGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCTAT
TCATGGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCCTG
GCCGCGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACC
GGTCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCAACCTCC
AGGACCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATGCCCGCC
TACAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGCTCTGCC
CCTGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCTATCCTGTC
CGTCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGAGGCCCGCG
CTATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCCGTACCGGT
GACATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCCGTTGCGGC
CGAGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGCCGTCCGCC
CGGAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGGCAAC
CTGCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCCCCCT
GAAAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAACTGA
CGGGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGGCTAC
GCCATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCACGCG
CCTCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTGTGGA
GTCTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAAGACC
GTCACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGCACCA
GCTTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAGCTGA
ACGGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGATGAG
GCTAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTTTGAG
TGGTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCTATTC
ATGGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGC
CGCGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGG
TCCTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCAACCTCCAG
GACCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATGCCCGCCTA
CAACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAGGCTCTGCCCC
TGATATTGCTGGCAAGGGCATCGTCAACCCTGTCGCTGCTATCCTGTCCG
TCGCTATGATGATGCAGTACTCTTTCGGTCGCTTCGATGAGGCCCGCGCT
ATTGAGGCTGCTGTCCGCAATGTCCTTGAGTCCGGTGTCCGTACCGGTGA
CATTGGCGGTAAGGCTACCACTAGCGAGGTTGGTGATGCCGTTGCGGCCG
AGCTGGAGAAGTTGTTGAAGTAGAAATGGGGCACCGGCGCCGTCCGCCCG
GAGCAGGGTCTCCTCAAGCTTCGCAAAGAGATGGGCACATTCGGCAACCT
GCGTCCCTGCAACTTCGCGGCCCCCTCCTTGGTCGAACACTCCCCCCTGA
AAGCCTCCGTCTGCGAGGGCGTCGACTTCAACATCATCCGCGAACTGACG
GGCGGAATCTACTTCGGTGACCGCAAGGAAGATGACGGCAGCGGCTACGC
CATGGACACGGAGCCGTACTCGCGCGCCGAGATCGAGCGGATCACGCGCC
TCGCGGCCCACCTTGCTCTGCAGCACAACCCCCCTCTCCCCGTGTGGAGT
CTGGATAAGGCCAACGTGCTGGCTACGAGTCGGTTGTGGAGGAAGACCGT
CACCGAGATCATGGCGAAGGAGTTCCCACAGTTGAAGATTGAGCACCAGC
TTATTGATTCTGCGGCTATGATTATGGTTAAGAACCCCCGTCAGCTGAAC
GGCATTATTGTCACGAGTAACCTGTTCGGTGATATCATTAGTGATGAGGC
TAGTGTTATTCCTGGTTCTCTGGGATTGTTGCCTAGTGCTAGTTTGAGTG
GTATCCCTGATGGTAAGGGTAGGGTTAATGGTATTTATGAGCCTATTCAT
GGCCTCCATTGACGCCACAGGCAACCCTCTGACTGACGAGGCCCTGGCCG
CGGCCAAGAATGCCGATGCCGTTCTCCTTGGTGCCATCGGTGGACCGGTC
CTCCGCGTCATCGAGAAGAGCCGCGATGACATCACCCTCAACCTCCAGGA
CCACCTGCTGGGCGGTGTTACCGCCGAGGCCATCAAGATGCCCGCCTACA
ACATTGTCGTTTTCGCCGGTGACCACTGCGGTCCCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0051287 | NAD binding |
| GO:0000287 | magnesium ion binding |
| GO:0003862 | 3-isopropylmalate dehydrogenase activity |
| GO:0016616 | oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0009098 | leucine biosynthetic process |
| GO:0055114 | oxidation-reduction process |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR019818 |
| DBxref | InterPro:IPR004429 |
| DBxref | InterPro:IPR024084 |
| DBxref | PFAM:PF00180 |
| Product | 3-isopropylmalate dehydrogenase A |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3384748..3386187 - |
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