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CBS51388_001159-T1, CBS51388_001159-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001159-T1
Unique NameCBS51388_001159-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3458364..3459967-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001159-T1 ID=CBS51388_001159-T1|Name=CBS51388_001159-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1604bp|location=Sequence derived from alignment at An01:3458364..3459967- (Aspergillus niger CBS 513.88)
ATGGTCTCCGTGAAGTCGAGCGAGAAACAGTGTGATGACCCGGACCCCAA
AGCAGAAAGGGTGCCGTCGGATACCGAGCCACCGCAAGAAGATCCGAATT
CGACTCCCGGTGAAACCGAGGTTTACTCGACCTTCTCCCGTTGGACAAAA
GCATTGATTGTCCTGATGGCCTCAGTGGCCAGTATTTTCTCCTCCTTGTC
GGCCAACATCTACCTGCCCGCCCTTGACACTATTGCCGAGCAGCTCCACG
TGAGCGATACCTTGATCAACCTCACCTTATCGACGTACATGGTAGGCAAA
TACATACAGCAGCAAAAAGACGAGAATTCGTTCTTACCATGATAAACTAG
ATCTTTCAAGGCCTCGCACCCACTATATTTGGCGGGCTTTCCGACAGTGC
AGGTCGGCGACCAGCGTACATTCTTTGCTTCATCACCTATATCGCCGCCA
ACATCGGGCTCGCCCTGCAGCGCAACTATGCCGCGCTGCTTATTTTGAGA
TGCCTTCAGAGTGCTGGCGGTAGCAGCACCATTGCTCTCGCTAATGCTAT
TGTTGCTGACGTCGTCACTACCGCCGAACGCGGCAGGTACATTGGATATG
TCTCGGCCGGCTTCATCCTTGGCCCGTCGATAGGGCCTATAATCGGGGGG
CTCCTGACCCAGTTCCTAGGCTGGCCCTTCATATTTTGGTTGTTGACAAT
CCTTGCAGGTGCTTTTTTTATTGTGCTACTGTTTTTCCTTCCCGAAACTG
CGCGCAAGGTTGTAGGCAATGGCTCACAATATCCCCCAATATGGAACCTG
TCGGGGCTTCAGCTCTGCTCTCGACGTCAACGGGCCGATGGTTACTCCTC
AGTGGAGACTCACATCCGCTTCCCCAACCCGCTCAAGGCCCTTACCATTA
TTTTTAAGAAAGAAGTTTTCCTGATCCTTCTGGGAAATGGTGTGGCCATC
GCAGGCTACTTTGCTGTTACAGGCACCATCACCTCGCAGTTCAGCCGCAT
CTATGGCTTTAACGAGGTGCAGATCGGTCTGTGCTTTATTCCACTTGGTG
CGGGCAATCTGATTGCTGCATACACACAGGGGATAATAACGGACTGGAAC
TATCGACGGCATGCACACAGCCAAGGCATAGATATTTCCAGCAAGCACCG
ACCTGACCTGGATAAGTTTGCCATCGAACGCCCCCGCACTGAGGTCGTCT
TACCGCAGGCAATCGGGGAGGCACTGAGCATGATTGCGTATGGCTGGGTA
TTGCACTACGAGACCAATCTTGCAGGTCCAATCATCCTACTTCTTCTCAT
CGGGTATACTTCCGCAGCAGTAATGAATACCTTGAGTGCGTTGATGGTCG
ATATCTACCCTCAGAGTCCGGCCATGGCAACAGCCCTCATGAATCTCACA
CGATGTTGGCTCGGAGCTGGTGCAGCTGCTGCAATCCTTCCTATGATTGA
CGCCATCGGCAATGGGTGGGCTTTTACTGTAATCGGATTCATGTGTTTTC
TGTGCGCGCCAGCGATGGTAGTGGTGTGGATCTGGGGTTATGACTGGCGC
AGACAGCGACACTGCCGGGAGGAGACGTCTCTGGGAAACCATATTAGCAA
TTGA
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Coding sequence (CDS) from alignment at An01:3458364..3459967-

>CBS51388_001159-T1 ID=CBS51388_001159-T1|Name=CBS51388_001159-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3090bp|location=Sequence derived from alignment at An01:3458364..3459967- (Aspergillus niger CBS 513.88)
ATCTTTCAAGGCCTCGCACCCACTATATTTGGCGGGCTTTCCGACAGTGC
AGGTCGGCGACCAGCGTACATTCTTTGCTTCATCACCTATATCGCCGCCA
ACATCGGGCTCGCCCTGCAGCGCAACTATGCCGCGCTGCTTATTTTGAGA
TGCCTTCAGAGTGCTGGCGGTAGCAGCACCATTGCTCTCGCTAATGCTAT
TGTTGCTGACGTCGTCACTACCGCCGAACGCGGCAGGTACATTGGATATG
TCTCGGCCGGCTTCATCCTTGGCCCGTCGATAGGGCCTATAATCGGGGGG
CTCCTGACCCAGTTCCTAGGCTGGCCCTTCATATTTTGGTTGTTGACAAT
CCTTGCAGGTGCTTTTTTTATTGTGCTACTGTTTTTCCTTCCCGAAACTG
CGCGCAAGGTTGTAGGCAATGGCTCACAATATCCCCCAATATGGAACCTG
TCGGGGCTTCAGCTCTGCTCTCGACGTCAACGGGCCGATGGTTACTCCTC
AGTGGAGACTCACATCCGCTTCCCCAACCCGCTCAAGGCCCTTACCATTA
TTTTTAAGAAAGAAGTTTTCCTGATCCTTCTGGGAAATGGTGTGGCCATC
GCAGGCTACTTTGCTGTTACAGGCACCATCACCTCGCAGTTCAGCCGCAT
CTATGGCTTTAACGAGGTGCAGATCGGTCTGTGCTTTATTCCACTTGGTG
CGGGCAATCTGATTGCTGCATACACACAGGGGATAATAACGGACTGGAAC
TATCGACGGCATGCACACAGCCAAGGCATAGATATTTCCAGCAAGCACCG
ACCTGACCTGGATAAGTTTGCCATCGAACGCCCCCGCACTGAGGTCGTCT
TACCGCAGGCAATCGGGGAGGCACTGAGCATGATTGCGTATGGCTGGGTA
TTGCACTACGAGACCAATCTTGCAGGTCCAATCATCCTACTTCTTCTCAT
CGGGTATACTTCCGCAGCAGTAATGAATACCTTGAGTGCGTTGATGGTCG
ATATCTACCCTCAGAGTCCGGCCATGGCAACAGCCCTCATGAATCTCACA
CGATGTTGGCTCGGAGCTGGTGCAGCTGCTGCAATCCTTCCTATGATTGA
CGCCATCGGCAATGGGTGGGCTTTTACTGTAATCGGATTCATGTGTTTTC
TGTGCGCGCCAGCGATGGTAGTGGTGTGGATCTGGGGTTATGACTGGCGC
AGACAGCGACACTGCCGGGAGGAGACGTCTCTGGGAAACCATATTAGCAA
TTGAATGGTCTCCGTGAAGTCGAGCGAGAAACAGTGTGATGACCCGGACC
CCAAAGCAGAAAGGGTGCCGTCGGATACCGAGCCACCGCAAGAAGATCCG
AATTCGACTCCCGGTGAAACCGAGGTTTACTCGACCTTCTCCCGTTGGAC
AAAAGCATTGATTGTCCTGATGGCCTCAGTGGCCAGTATTTTCTCCTCCT
TGTCGGCCAACATCTACCTGCCCGCCCTTGACACTATTGCCGAGCAGCTC
CACGTGAGCGATACCTTGATCAACCTCACCTTATCGACGTACATGATCTT
TCAAGGCCTCGCACCCACTATATTTGGCGGGCTTTCCGACAGTGCAGGTC
GGCGACCAGCGTACATTCTTTGCTTCATCACCTATATCGCCGCCAACATC
GGGCTCGCCCTGCAGCGCAACTATGCCGCGCTGCTTATTTTGAGATGCCT
TCAGAGTGCTGGCGGTAGCAGCACCATTGCTCTCGCTAATGCTATTGTTG
CTGACGTCGTCACTACCGCCGAACGCGGCAGGTACATTGGATATGTCTCG
GCCGGCTTCATCCTTGGCCCGTCGATAGGGCCTATAATCGGGGGGCTCCT
GACCCAGTTCCTAGGCTGGCCCTTCATATTTTGGTTGTTGACAATCCTTG
CAGGTGCTTTTTTTATTGTGCTACTGTTTTTCCTTCCCGAAACTGCGCGC
AAGGTTGTAGGCAATGGCTCACAATATCCCCCAATATGGAACCTGTCGGG
GCTTCAGCTCTGCTCTCGACGTCAACGGGCCGATGGTTACTCCTCAGTGG
AGACTCACATCCGCTTCCCCAACCCGCTCAAGGCCCTTACCATTATTTTT
AAGAAAGAAGTTTTCCTGATCCTTCTGGGAAATGGTGTGGCCATCGCAGG
CTACTTTGCTGTTACAGGCACCATCACCTCGCAGTTCAGCCGCATCTATG
GCTTTAACGAGGTGCAGATCGGTCTGTGCTTTATTCCACTTGGTGCGGGC
AATCTGATTGCTGCATACACACAGGGGATAATAACGGACTGGAACTATCG
ACGGCATGCACACAGCCAAGGCATAGATATTTCCAGCAAGCACCGACCTG
ACCTGGATAAGTTTGCCATCGAACGCCCCCGCACTGAGGTCGTCTTACCG
CAGGCAATCGGGGAGGCACTGAGCATGATTGCGTATGGCTGGGTATTGCA
CTACGAGACCAATCTTGCAGGTCCAATCATCCTACTTCTTCTCATCGGGT
ATACTTCCGCAGCAGTAATGAATACCTTGAGTGCGTTGATGGTCGATATC
TACCCTCAGAGTCCGGCCATGGCAACAGCCCTCATGAATCTCACACGATG
TTGGCTCGGAGCTGGTGCAGCTGCTGCAATCCTTCCTATGATTGACGCCA
TCGGCAATGGGTGGGCTTTTACTGTAATCGGATTCATGTGTTTTCTGTGC
GCGCCAGCGATGGTAGTGGTGTGGATCTGGGGTTATGACTGGCGCAGACA
GCGACACTGCCGGGAGGAGACGTCTCTGGGAAACCATATTAGCAATTGAA
TGGTCTCCGTGAAGTCGAGCGAGAAACAGTGTGATGACCCGGACCCCAAA
GCAGAAAGGGTGCCGTCGGATACCGAGCCACCGCAAGAAGATCCGAATTC
GACTCCCGGTGAAACCGAGGTTTACTCGACCTTCTCCCGTTGGACAAAAG
CATTGATTGTCCTGATGGCCTCAGTGGCCAGTATTTTCTCCTCCTTGTCG
GCCAACATCTACCTGCCCGCCCTTGACACTATTGCCGAGCAGCTCCACGT
GAGCGATACCTTGATCAACCTCACCTTATCGACGTACATG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001159CBS51388_001159Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001159-T1CBS51388_001159-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001159-T1.cdsCBS51388_001159-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001159-T1.exon2CBS51388_001159-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001159-T1.exon1CBS51388_001159-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3458364..3459967 -
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