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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3493265..3494920+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001173-T1 ID=CBS51388_001173-T1|Name=CBS51388_001173-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1656bp|location=Sequence derived from alignment at An01:3493265..3494920+ (Aspergillus niger CBS 513.88)
ATGGCCTCCTGTCAAGCCTTCCTCTTGCTGGGGTTTGACCAAGGTTGGTA
GTTTTCTTCACGGTCTCCCGGGATAGAGGATGATGATGGCTGACAAGACG
GGAATGATAGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCTTCGC
CCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACCGGTC
TCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCATCGGC
GAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCATGAT
CATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTGCTGG
TCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCACCGCC
CCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCACTCCT
CACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTACTGGT
GAGTTCGACCCATGTTACCACACATTTACCGATGTACTAACGGAGCAATT
CTCCATAGGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAATG
GCGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTGC
AGGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCGT
CATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCGA
TGATCCCAACGTCACCAAAACCATCATGGACATCCAATTCGTGCTGGAGG
AGGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGC
GAAGTGCAGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGGG
CCAACAATTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATGT
TCCAGGAGACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGGG
GCCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGAT
GGACCGGTATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTAT
GCCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGAC
TGTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACGG
CGTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACAA
CGCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGATG
GCCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCATTTGGTGGGTTTTG
CTGCGCTTGATGAATCAGGAAGAATGACATACTGACATATGATGTATAGA
CAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCCGTAT
TTATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGAGCTC
GAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAGTCTT
CACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTGGAAG
CCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCATATC
GGATGA back to topCoding sequence (CDS) from alignment at An01:3493265..3494920+ >CBS51388_001173-T1 ID=CBS51388_001173-T1|Name=CBS51388_001173-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5880bp|location=Sequence derived from alignment at An01:3493265..3494920+ (Aspergillus niger CBS 513.88)
ATGGCCTCCTGTCAAGCCTTCCTCTTGCTGGGGTTTGACCAAGGTGTCAT
GTCCGGCATTGTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAATAACC
CCGACGCGGCGATGCAGGGCAACATTACCGGTCTCTACGATATCGGTTGC
GTGATCGGATCCATCATTTGCTACTTCATCGGCGAGCGAATGGGTCGTCG
AACCATGCTGATGATGGGCGGGTTCATCATGATCATCGGAACCGTCATCC
TCGCTTCCTCCTACACAATAGCACAGCTGCTGGTCGGCCGAATCGTTACC
GGGCTGGGTAACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGAGTGA
ATGTTCTCCAGCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGAACCG
TCACTATCCTGGGCGTGGTGATCGCCTACTGGATGGACTACGGCACCAGC
TTTACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGGCTGT
CTTCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACCCCCC
GTTGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGTGGCT
GCCATCGAAGACACCACTATCGATGATCCCAACGTCACCAAAACCATCAT
GGACATCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTCCGCG
TCAAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCTATTC
ATCACCATCACCATTGAGCTGGGCCAACAATTCACGGGATCAAATATGAT
AAATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAATATGAGCCGCA
ACTTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGTGGGT
TCGGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGCGTACCTTACT
AATGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCGATTC
TGCTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTTCATC
TTCATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCATGGTT
CTACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGGATGCAGGCCA
TCGCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGATCACT
CCAATTGCATTTGACAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGT
ATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTACCCGGAGACGA
AGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATC
ACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTCACACCCGGCCA
GCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGC
AAGTGGAGCATATCGGATGAATGGCCTCCTGTCAAGCCTTCCTCTTGCTG
GGGTTTGACCAAGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCTT
CGCCCGCGACTTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACCG
GTCTCTACGATATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCATC
GGCGAGCGAATGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCAT
GATCATCGGAACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTGC
TGGTCGGCCGAATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCACC
GCCCCCGTCTATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCACT
CCTCACCCTTCAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTACT
GGATGGACTACGGCACCAGCTTTACTGATTCCTCCTACGAATGGCGGCTT
CCCCTCGCCTTTCAGGCTGTCTTCGCCATCTGTCTCATCTTGCAGGTGGT
CGGTCTCCCAGAAACCCCCCGTTGGCTGGTCCAGCACGACCGTCATGAGG
AAGCCCGCGCTGTCGTGGCTGCCATCGAAGACACCACTATCGATGATCCC
AACGTCACCAAAACCATCATGGACATCCAATTCGTGCTGGAGGAGGAACA
AAAGGACGGTCCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGCGAAGTGC
AGAACCTCCGACGTCTATTCATCACCATCACCATTGAGCTGGGCCAACAA
TTCACGGGATCAAATATGATAAATTATTACGGGCCGGTGATGTTCCAGGA
GACCATGAATATGAGCCGCAACTTGTCACTGATCCTGGGTGGGGCCATGC
AGTGTACCTACCTGGTGGGTTCGGCAATCCCGGTGTTCTTGATGGACCGG
TATGGACGGCGTACCTTACTAATGGTGTGCTCGGCCGGCTTATGCCTGTG
CTTCGTGATGGTGTCGATTCTGCTCTCCCTGGACCGCGAGGACTGTGCCT
ACGGCGCGACCGTCTTCATCTTCATCTTCCAGATCTTCTACGGCGTGGGC
TGGCTGCCCGTCCCATGGTTCTACCCAGCCGAGCTGAACACAACGCGGGT
TCGGACGCGGATGCAGGCCATCGCGTCCGGATGGAACTGGATGGCCGTGT
TTGCCGTGGTGAAGATCACTCCAATTGCATTTGACAACATCGGCTGGCGC
ACCTTTGTCATCTTCGCGGTATTGAACGCCGTATTTATCCCGATGGTGTA
CTTCTTTTACCCGGAGACGAAGGGACTCGAGCTCGAGGACATCCCCTTGC
TTTTCCACAAGGGTGGAATCACCGGAGGAGTCTTCACCTCGAAGGGTGGA
CGCACCGTCACACCCGGCCAGCACGCGCTGGAAGCCCGCGTGGACCAAAA
GGTCGAGGGCACGGTACAGCAAGTGGAGCATATCGGATGAATGGCCTCCT
GTCAAGCCTTCCTCTTGCTGGGGTTTGACCAAGGTGTCATGTCCGGCATT
GTGGGTGCGGATAATCGCTTCGCCCGCGACTTCAATAACCCCGACGCGGC
GATGCAGGGCAACATTACCGGTCTCTACGATATCGGTTGCGTGATCGGAT
CCATCATTTGCTACTTCATCGGCGAGCGAATGGGTCGTCGAACCATGCTG
ATGATGGGCGGGTTCATCATGATCATCGGAACCGTCATCCTCGCTTCCTC
CTACACAATAGCACAGCTGCTGGTCGGCCGAATCGTTACCGGGCTGGGTA
ACGGAATGAACTCCTCCACCGCCCCCGTCTATCAGAGTGAATGTTCTCCA
GCAGCATACCGTGGTGCACTCCTCACCCTTCAAGGAACCGTCACTATCCT
GGGCGTGGTGATCGCCTACTGGATGGACTACGGCACCAGCTTTACTGATT
CCTCCTACGAATGGCGGCTTCCCCTCGCCTTTCAGGCTGTCTTCGCCATC
TGTCTCATCTTGCAGGTGGTCGGTCTCCCAGAAACCCCCCGTTGGCTGGT
CCAGCACGACCGTCATGAGGAAGCCCGCGCTGTCGTGGCTGCCATCGAAG
ACACCACTATCGATGATCCCAACGTCACCAAAACCATCATGGACATCCAA
TTCGTGCTGGAGGAGGAACAAAAGGACGGTCCGTTCCGCGTCAAGGAGCT
CTTTACCTGGGGCGAAGTGCAGAACCTCCGACGTCTATTCATCACCATCA
CCATTGAGCTGGGCCAACAATTCACGGGATCAAATATGATAAATTATTAC
GGGCCGGTGATGTTCCAGGAGACCATGAATATGAGCCGCAACTTGTCACT
GATCCTGGGTGGGGCCATGCAGTGTACCTACCTGGTGGGTTCGGCAATCC
CGGTGTTCTTGATGGACCGGTATGGACGGCGTACCTTACTAATGGTGTGC
TCGGCCGGCTTATGCCTGTGCTTCGTGATGGTGTCGATTCTGCTCTCCCT
GGACCGCGAGGACTGTGCCTACGGCGCGACCGTCTTCATCTTCATCTTCC
AGATCTTCTACGGCGTGGGCTGGCTGCCCGTCCCATGGTTCTACCCAGCC
GAGCTGAACACAACGCGGGTTCGGACGCGGATGCAGGCCATCGCGTCCGG
ATGGAACTGGATGGCCGTGTTTGCCGTGGTGAAGATCACTCCAATTGCAT
TTGACAACATCGGCTGGCGCACCTTTGTCATCTTCGCGGTATTGAACGCC
GTATTTATCCCGATGGTGTACTTCTTTTACCCGGAGACGAAGGGACTCGA
GCTCGAGGACATCCCCTTGCTTTTCCACAAGGGTGGAATCACCGGAGGAG
TCTTCACCTCGAAGGGTGGACGCACCGTCACACCCGGCCAGCACGCGCTG
GAAGCCCGCGTGGACCAAAAGGTCGAGGGCACGGTACAGCAAGTGGAGCA
TATCGGATGAATGGCCTCCTGTCAAGCCTTCCTCTTGCTGGGGTTTGACC
AAGGTGTCATGTCCGGCATTGTGGGTGCGGATAATCGCTTCGCCCGCGAC
TTCAATAACCCCGACGCGGCGATGCAGGGCAACATTACCGGTCTCTACGA
TATCGGTTGCGTGATCGGATCCATCATTTGCTACTTCATCGGCGAGCGAA
TGGGTCGTCGAACCATGCTGATGATGGGCGGGTTCATCATGATCATCGGA
ACCGTCATCCTCGCTTCCTCCTACACAATAGCACAGCTGCTGGTCGGCCG
AATCGTTACCGGGCTGGGTAACGGAATGAACTCCTCCACCGCCCCCGTCT
ATCAGAGTGAATGTTCTCCAGCAGCATACCGTGGTGCACTCCTCACCCTT
CAAGGAACCGTCACTATCCTGGGCGTGGTGATCGCCTACTGGATGGACTA
CGGCACCAGCTTTACTGATTCCTCCTACGAATGGCGGCTTCCCCTCGCCT
TTCAGGCTGTCTTCGCCATCTGTCTCATCTTGCAGGTGGTCGGTCTCCCA
GAAACCCCCCGTTGGCTGGTCCAGCACGACCGTCATGAGGAAGCCCGCGC
TGTCGTGGCTGCCATCGAAGACACCACTATCGATGATCCCAACGTCACCA
AAACCATCATGGACATCCAATTCGTGCTGGAGGAGGAACAAAAGGACGGT
CCGTTCCGCGTCAAGGAGCTCTTTACCTGGGGCGAAGTGCAGAACCTCCG
ACGTCTATTCATCACCATCACCATTGAGCTGGGCCAACAATTCACGGGAT
CAAATATGATAAATTATTACGGGCCGGTGATGTTCCAGGAGACCATGAAT
ATGAGCCGCAACTTGTCACTGATCCTGGGTGGGGCCATGCAGTGTACCTA
CCTGGTGGGTTCGGCAATCCCGGTGTTCTTGATGGACCGGTATGGACGGC
GTACCTTACTAATGGTGTGCTCGGCCGGCTTATGCCTGTGCTTCGTGATG
GTGTCGATTCTGCTCTCCCTGGACCGCGAGGACTGTGCCTACGGCGCGAC
CGTCTTCATCTTCATCTTCCAGATCTTCTACGGCGTGGGCTGGCTGCCCG
TCCCATGGTTCTACCCAGCCGAGCTGAACACAACGCGGGTTCGGACGCGG
ATGCAGGCCATCGCGTCCGGATGGAACTGGATGGCCGTGTTTGCCGTGGT
GAAGATCACTCCAATTGCATTTGACAACATCGGCTGGCGCACCTTTGTCA
TCTTCGCGGTATTGAACGCCGTATTTATCCCGATGGTGTACTTCTTTTAC
CCGGAGACGAAGGGACTCGAGCTCGAGGACATCCCCTTGCTTTTCCACAA
GGGTGGAATCACCGGAGGAGTCTTCACCTCGAAGGGTGGACGCACCGTCA
CACCCGGCCAGCACGCGCTGGAAGCCCGCGTGGACCAAAAGGTCGAGGGC
ACGGTACAGCAAGTGGAGCATATCGGATGA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
| GO:0016020 | membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005829 |
| DBxref | InterPro:IPR005828 |
| DBxref | InterPro:IPR003663 |
| DBxref | PFAM:PF00083 |
| DBxref | PFAM:PF07690 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3493265..3494920 + |
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