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Sequences
The following sequences are available for this feature:
mRNA from alignment at An01:3534130..3536142- Legend: CDSpolypeptideexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001187-T1 ID=CBS51388_001187-T1|Name=CBS51388_001187-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2013bp|location=Sequence derived from alignment at An01:3534130..3536142- (Aspergillus niger CBS 513.88)
ATGGAGTTGGGGCAGGACCCAATTTCCGATAACTTTGCCTTTGCATTTCC
CAATTTCGTTCCCTCTCAATTCTTGGACACTGAGATCTCTCTCTCGGATC
TACTCGAGCAGTTTCCTGCACAGGGGCAGGCGTCTCAGGGACCACGGTTG
TCTTCAACGCCAGCTGGTCCTCCTGCTCCCTCTCTCGACGACACAGGCGA
CTATCCTAGTGACCTGCCCGATCCAAAGGACCAACCACAGCGCCGCCTGC
CATCGCTAGATGACCAGCCGCACAAAAGTGGCTTGGAGGCGCAACTCGAC
GCGGCAGGATGTCCGTGGGCAATCTCTGCGGGCGCGTATAAGACGATCGT
GGAAAAACTGACCGCAAAGCGGACTGCCTTAATTGATTTTTCACTGCCAT
CCAGATGTGCTCTCGTGCGATATTTGGAGGGCTACTTCCGAGGATTTCAT
GACCATCTTCCGTTTCTTCATATGCCGACCTTCCGTGCAGAGACCGTCGA
GCCCGAGCTCCTCCTCGCAATGGCGGCTGTCGGCGCCTTGCATCGCTTCG
AGCATCACAAGGGCCACCAGTTGTACGTCGCAGCGCGGTCCATGATTGAC
CAGAACACGCAGGATCGCCGTCGCAGACTGGTCGGGCAACTAGTCGGCCG
CTCACCAGGATCTGCAGCATATGCCAGTCCTTTTTCAGACAGTCGCCGCG
GTTCGAGCAATCCGGCCAGTGCAAACGAGACGGCTGAAGATACTACTGGC
GAACTTCAGCGAGCACAAGCCTTGATCGTTCTGACAGCCATGAGCTCCTG
GGGTGAGGAAGTCCTCGCGCAGGATAGTCTAGCGATGAGCAGCCAGCTGG
CCGTGCTCGTGCGGACACTGGGGATTCAGGAAGCGGACAATGACGTAGAT
GCCGAACTCAGCTGGCTGGCATGGGTGGCACACCAACAGCGGCGACGTAC
CTTCTTAATCGCATACATTGTCTTTAACCTGCAGAGCATCATCTTCAATA
TTCCGCCGCAGATTCTTACCAGCGAGGTGGCCGTGTGTTTGCCATCCTGT
GAAGCAGAATGGAGGGCTTCTTCACCCGCCGCGTGGGAGCGACATCGCGC
CGTCTCCCGGCTTCATGAACGCGGATTCACTTCGACGCTCAACGAACTTC
TCAACGGAAACGATATTACTGGTCATAGCCTCATCTCTCCGTTTTCCAAC
TATATTCTCATTCATGGCCTGGTACAGCGCATCTACTTTGAGCGACAAGC
CGCTGGTGGCAGTTTGCGTACTCCGCTCGTAGAATCCCTCGAAACAGCAC
TGAAGCACTGGCAATCTAGCTGGGAGAGCACCTGGGAGTCGAGTCTGGAC
CCATACTGTCCCCAGGGACCGTTGGGGTTCAATGCGACCGCACTGCTACG
ACTCGCCTACATCCGTTTGAATTGTCGGACGGGTCTCTGTCATGAGCTCC
TCTCCAGCGATACGACTCGAATCAAATCACTCATCTCTCCGACACCACCG
CTAGATCATATTAGTCGTTCCCCGGCCCTCAATCGTGCTATCCTGCAGTG
CATCCACGCCCTGAGCATCCCTGTGCGGGTGGGAATCCCCTACGTCGCGC
GCACGCAGACCTTGAGCTGGAGCGTACAGCACTCCATCTGCCACCTAGAG
TGCGCGGTGCTGTTGATACGGTGGATGCAGATGCTGGCTAGCGCCGTGGC
AGCACACGGGATGGGGAGTCTGCGGGAGGATGAACGGAAGCTGCTCAGCA
TGGTGGAGTACTTGATTCAGGAGACAAATGCCGTGGAGGGAGATGAAGGC
AAGCAGAGAGAGAGTGAAGCGGAGAAGATCCAGCGGCTGGCGGGCATGAC
GGCGCAGGTCTGGGCTGAGATCTCGAGCGGGATTCATGTCTTTGATCTGG
TGCGGAGGATTGGGGAGGCGTTAAGGGGGATTGCGGACATGCTAGGAGGT
GAAGGGGAAGGGGGTAGTGAGACATATTATCTCTCCTCCAGCTCTGGCAG
TATAACCCGGTAA back to topCoding sequence (CDS) from alignment at An01:3534130..3536142- >CBS51388_001187-T1 ID=CBS51388_001187-T1|Name=CBS51388_001187-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2013bp|location=Sequence derived from alignment at An01:3534130..3536142- (Aspergillus niger CBS 513.88)
ATGGAGTTGGGGCAGGACCCAATTTCCGATAACTTTGCCTTTGCATTTCC
CAATTTCGTTCCCTCTCAATTCTTGGACACTGAGATCTCTCTCTCGGATC
TACTCGAGCAGTTTCCTGCACAGGGGCAGGCGTCTCAGGGACCACGGTTG
TCTTCAACGCCAGCTGGTCCTCCTGCTCCCTCTCTCGACGACACAGGCGA
CTATCCTAGTGACCTGCCCGATCCAAAGGACCAACCACAGCGCCGCCTGC
CATCGCTAGATGACCAGCCGCACAAAAGTGGCTTGGAGGCGCAACTCGAC
GCGGCAGGATGTCCGTGGGCAATCTCTGCGGGCGCGTATAAGACGATCGT
GGAAAAACTGACCGCAAAGCGGACTGCCTTAATTGATTTTTCACTGCCAT
CCAGATGTGCTCTCGTGCGATATTTGGAGGGCTACTTCCGAGGATTTCAT
GACCATCTTCCGTTTCTTCATATGCCGACCTTCCGTGCAGAGACCGTCGA
GCCCGAGCTCCTCCTCGCAATGGCGGCTGTCGGCGCCTTGCATCGCTTCG
AGCATCACAAGGGCCACCAGTTGTACGTCGCAGCGCGGTCCATGATTGAC
CAGAACACGCAGGATCGCCGTCGCAGACTGGTCGGGCAACTAGTCGGCCG
CTCACCAGGATCTGCAGCATATGCCAGTCCTTTTTCAGACAGTCGCCGCG
GTTCGAGCAATCCGGCCAGTGCAAACGAGACGGCTGAAGATACTACTGGC
GAACTTCAGCGAGCACAAGCCTTGATCGTTCTGACAGCCATGAGCTCCTG
GGGTGAGGAAGTCCTCGCGCAGGATAGTCTAGCGATGAGCAGCCAGCTGG
CCGTGCTCGTGCGGACACTGGGGATTCAGGAAGCGGACAATGACGTAGAT
GCCGAACTCAGCTGGCTGGCATGGGTGGCACACCAACAGCGGCGACGTAC
CTTCTTAATCGCATACATTGTCTTTAACCTGCAGAGCATCATCTTCAATA
TTCCGCCGCAGATTCTTACCAGCGAGGTGGCCGTGTGTTTGCCATCCTGT
GAAGCAGAATGGAGGGCTTCTTCACCCGCCGCGTGGGAGCGACATCGCGC
CGTCTCCCGGCTTCATGAACGCGGATTCACTTCGACGCTCAACGAACTTC
TCAACGGAAACGATATTACTGGTCATAGCCTCATCTCTCCGTTTTCCAAC
TATATTCTCATTCATGGCCTGGTACAGCGCATCTACTTTGAGCGACAAGC
CGCTGGTGGCAGTTTGCGTACTCCGCTCGTAGAATCCCTCGAAACAGCAC
TGAAGCACTGGCAATCTAGCTGGGAGAGCACCTGGGAGTCGAGTCTGGAC
CCATACTGTCCCCAGGGACCGTTGGGGTTCAATGCGACCGCACTGCTACG
ACTCGCCTACATCCGTTTGAATTGTCGGACGGGTCTCTGTCATGAGCTCC
TCTCCAGCGATACGACTCGAATCAAATCACTCATCTCTCCGACACCACCG
CTAGATCATATTAGTCGTTCCCCGGCCCTCAATCGTGCTATCCTGCAGTG
CATCCACGCCCTGAGCATCCCTGTGCGGGTGGGAATCCCCTACGTCGCGC
GCACGCAGACCTTGAGCTGGAGCGTACAGCACTCCATCTGCCACCTAGAG
TGCGCGGTGCTGTTGATACGGTGGATGCAGATGCTGGCTAGCGCCGTGGC
AGCACACGGGATGGGGAGTCTGCGGGAGGATGAACGGAAGCTGCTCAGCA
TGGTGGAGTACTTGATTCAGGAGACAAATGCCGTGGAGGGAGATGAAGGC
AAGCAGAGAGAGAGTGAAGCGGAGAAGATCCAGCGGCTGGCGGGCATGAC
GGCGCAGGTCTGGGCTGAGATCTCGAGCGGGATTCATGTCTTTGATCTGG
TGCGGAGGATTGGGGAGGCGTTAAGGGGGATTGCGGACATGCTAGGAGGT
GAAGGGGAAGGGGGTAGTGAGACATATTATCTCTCCTCCAGCTCTGGCAG
TATAACCCGGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005634 | nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006351 | transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003677 | DNA binding |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_1.7 |
| DBxref | InterPro:IPR007219 |
| DBxref | PFAM:PF04082 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An01 | supercontig | An01:3534130..3536142 - |
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