CBS51388_001202-T1, CBS51388_001202-T1 (mRNA) Aspergillus niger CBS 513.88

Overview


Name	CBS51388_001202-T1
Unique Name	CBS51388_001202-T1
Type	mRNA
Organism	Aspergillus niger CBS 513.88

Sequences

The following sequences are available for this feature:

mRNA from alignment at An01:3567660..3569298+
coding sequence from alignment at An01:3567660..3569298+

mRNA from alignment at An01:3567660..3569298+

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>CBS51388_001202-T1 ID=CBS51388_001202-T1|Name=CBS51388_001202-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1639bp|location=Sequence derived from alignment at An01:3567660..3569298+ (Aspergillus niger CBS 513.88)
ATGGATCGCAAAAAGGATCAAGACTCGGTACAGACGACGGAAGCAGCTCA
GTCCGCCAAACAGACACAGGTGCAGATATCATCAGATGCCGCCGAAGATG
TGGCCCCAGATCAAAGCCGTCGAAAGACTTCCAAACTTTCGGTCTTGCTG
ATGATTGTGTTTTCCGGTCTGGCCATTGGCTCCGACGGTTTTAACGCATC
CATCATCGGCAACCTCGAATTGATCATGGAAGTCATCTACCCAAAGGCTC
TCACCACGGCTGTCGCATCTCGTCTGTCCAATGCCTTCATGGTAGGTATG
ATCATTGGCATGTTATCCTTCGGATACCTGTCCGATAGGTTGGGCCGGAA
GACTGGCGCAGTCTTGACCACCGTTATCCTAGTGCTAGGGATCGCTTTGA
GCGCTGGTGCGAGCGGAACGAATCGAGATGGGATGTTTTGGATGCTGATC
ATCGCAAGAGGAATCGCTGGCGTGGGTGCGGGTGGGTGAGTTCGCTTATT
ATCATCTCAAGCAATCAGGGATCTGTTACTCACTCGTTCCCCAGGGAGTA
TCCGGTCGCCGGGGCTGGAGCTGCAGAAGCCACCGACGAGGATCTGGGCG
TCCGAAACAAACGCGGGTTTATATTTGCCATGATCGCCGACCTGTCGGCC
TCGCTTGGGTTCGCCTTTGGTGCTCTGGTCCCTCTGCTGCTGCTGCTGTG
CTTTCACCAACAGATCCATCATTATGAAGCCGTCTGGCGGATATCCCTCG
CGCTGGGGGTGATTCCGCCGCTCTCAATCTTCTGGTTCCGATATCGAATG
GCAGTCAGCTCGGCCTATCGCAAGAGTGCGATGCAGAAGCAAGCAGTGCC
CTACTGGTTGGCACTCAAGCGATATTGGCGTCCGTTGCTGGGCACTTGCG
GATCCTGGTTCATGTAAGTGATTGAGTATATGCTATTGCTTGTTGTGGCT
CTAATATCAATGCTAGTTATAACTACATTTCGTACCCCTTTGGGCTGTTT
TCATCTACGATTGTCGGTCGTGTGAACCCGACCTCCTCTCTGGCGCTGAC
AATGGCCTGGGGCACTCTTATCAACTGTTTCTACATTCCCGGGGCATTCA
TCGGGGGCTTCCTGTCCGATCGGATTGGGCGGCGGCGGACCATGGCGCTC
GGGTACTTTCTCCAGGCGGCCCTGGGCTTCATCCTAGGTGGCGCGCTGGG
ACCTTTTGAGAAATCGCTGCCGCTCTTCATTGTGCTCTATGGCATCTTCC
TCACGCTGGGAGAGGTGGGTCCCGGATCGACGATTGTCGTGACAGCCAGT
GAAAGTTTTCCGACCGCGATTCGCGGGCACGCCGTGGGATTTGCAGCGGC
GTGGAGCAAGGCGGGGGCGGCCATTGGCACGGCGGTCTTCAAGCCCATCC
TCGCCAGCTGGGGAGACGATGAATTTCGCGGTACGCAGGCCGTGTTTCTC
ATTGGCTCCGGGTTCGCCGTCTTAGGGGGGCTACTGGCCTGGTTTGTGTT
CCAGGATGTGGACCACGCGCTGGACAACGAGGATCAGGCTTGGAAGGACT
ATCTGGCTGCTAATGGTCATGGGGATGTGCAGTGGGGCATTGCAAGCAAC
TCAACCCATGAGCTGGAATCGAAGGCAGTGCAGATGTAG

Coding sequence (CDS) from alignment at An01:3567660..3569298+

>CBS51388_001202-T1 ID=CBS51388_001202-T1|Name=CBS51388_001202-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4581bp|location=Sequence derived from alignment at An01:3567660..3569298+ (Aspergillus niger CBS 513.88)
ATGGATCGCAAAAAGGATCAAGACTCGGTACAGACGACGGAAGCAGCTCA
GTCCGCCAAACAGACACAGGTGCAGATATCATCAGATGCCGCCGAAGATG
TGGCCCCAGATCAAAGCCGTCGAAAGACTTCCAAACTTTCGGTCTTGCTG
ATGATTGTGTTTTCCGGTCTGGCCATTGGCTCCGACGGTTTTAACGCATC
CATCATCGGCAACCTCGAATTGATCATGGAAGTCATCTACCCAAAGGCTC
TCACCACGGCTGTCGCATCTCGTCTGTCCAATGCCTTCATGGTAGGTATG
ATCATTGGCATGTTATCCTTCGGATACCTGTCCGATAGGTTGGGCCGGAA
GACTGGCGCAGTCTTGACCACCGTTATCCTAGTGCTAGGGATCGCTTTGA
GCGCTGGTGCGAGCGGAACGAATCGAGATGGGATGTTTTGGATGCTGATC
ATCGCAAGAGGAATCGCTGGCGTGGGTGCGGGTGGGGAGTATCCGGTCGC
CGGGGCTGGAGCTGCAGAAGCCACCGACGAGGATCTGGGCGTCCGAAACA
AACGCGGGTTTATATTTGCCATGATCGCCGACCTGTCGGCCTCGCTTGGG
TTCGCCTTTGGTGCTCTGGTCCCTCTGCTGCTGCTGCTGTGCTTTCACCA
ACAGATCCATCATTATGAAGCCGTCTGGCGGATATCCCTCGCGCTGGGGG
TGATTCCGCCGCTCTCAATCTTCTGGTTCCGATATCGAATGGCAGTCAGC
TCGGCCTATCGCAAGAGTGCGATGCAGAAGCAAGCAGTGCCCTACTGGTT
GGCACTCAAGCGATATTGGCGTCCGTTGCTGGGCACTTGCGGATCCTGGT
TCATTTATAACTACATTTCGTACCCCTTTGGGCTGTTTTCATCTACGATT
GTCGGTCGTGTGAACCCGACCTCCTCTCTGGCGCTGACAATGGCCTGGGG
CACTCTTATCAACTGTTTCTACATTCCCGGGGCATTCATCGGGGGCTTCC
TGTCCGATCGGATTGGGCGGCGGCGGACCATGGCGCTCGGGTACTTTCTC
CAGGCGGCCCTGGGCTTCATCCTAGGTGGCGCGCTGGGACCTTTTGAGAA
ATCGCTGCCGCTCTTCATTGTGCTCTATGGCATCTTCCTCACGCTGGGAG
AGGTGGGTCCCGGATCGACGATTGTCGTGACAGCCAGTGAAAGTTTTCCG
ACCGCGATTCGCGGGCACGCCGTGGGATTTGCAGCGGCGTGGAGCAAGGC
GGGGGCGGCCATTGGCACGGCGGTCTTCAAGCCCATCCTCGCCAGCTGGG
GAGACGATGAATTTCGCGGTACGCAGGCCGTGTTTCTCATTGGCTCCGGG
TTCGCCGTCTTAGGGGGGCTACTGGCCTGGTTTGTGTTCCAGGATGTGGA
CCACGCGCTGGACAACGAGGATCAGGCTTGGAAGGACTATCTGGCTGCTA
ATGGTCATGGGGATGTGCAGTGGGGCATTGCAAGCAACTCAACCCATGAG
CTGGAATCGAAGGCAGTGCAGATGTAGATGGATCGCAAAAAGGATCAAGA
CTCGGTACAGACGACGGAAGCAGCTCAGTCCGCCAAACAGACACAGGTGC
AGATATCATCAGATGCCGCCGAAGATGTGGCCCCAGATCAAAGCCGTCGA
AAGACTTCCAAACTTTCGGTCTTGCTGATGATTGTGTTTTCCGGTCTGGC
CATTGGCTCCGACGGTTTTAACGCATCCATCATCGGCAACCTCGAATTGA
TCATGGAAGTCATCTACCCAAAGGCTCTCACCACGGCTGTCGCATCTCGT
CTGTCCAATGCCTTCATGGTAGGTATGATCATTGGCATGTTATCCTTCGG
ATACCTGTCCGATAGGTTGGGCCGGAAGACTGGCGCAGTCTTGACCACCG
TTATCCTAGTGCTAGGGATCGCTTTGAGCGCTGGTGCGAGCGGAACGAAT
CGAGATGGGATGTTTTGGATGCTGATCATCGCAAGAGGAATCGCTGGCGT
GGGTGCGGGTGGGGAGTATCCGGTCGCCGGGGCTGGAGCTGCAGAAGCCA
CCGACGAGGATCTGGGCGTCCGAAACAAACGCGGGTTTATATTTGCCATG
ATCGCCGACCTGTCGGCCTCGCTTGGGTTCGCCTTTGGTGCTCTGGTCCC
TCTGCTGCTGCTGCTGTGCTTTCACCAACAGATCCATCATTATGAAGCCG
TCTGGCGGATATCCCTCGCGCTGGGGGTGATTCCGCCGCTCTCAATCTTC
TGGTTCCGATATCGAATGGCAGTCAGCTCGGCCTATCGCAAGAGTGCGAT
GCAGAAGCAAGCAGTGCCCTACTGGTTGGCACTCAAGCGATATTGGCGTC
CGTTGCTGGGCACTTGCGGATCCTGGTTCATTTATAACTACATTTCGTAC
CCCTTTGGGCTGTTTTCATCTACGATTGTCGGTCGTGTGAACCCGACCTC
CTCTCTGGCGCTGACAATGGCCTGGGGCACTCTTATCAACTGTTTCTACA
TTCCCGGGGCATTCATCGGGGGCTTCCTGTCCGATCGGATTGGGCGGCGG
CGGACCATGGCGCTCGGGTACTTTCTCCAGGCGGCCCTGGGCTTCATCCT
AGGTGGCGCGCTGGGACCTTTTGAGAAATCGCTGCCGCTCTTCATTGTGC
TCTATGGCATCTTCCTCACGCTGGGAGAGGTGGGTCCCGGATCGACGATT
GTCGTGACAGCCAGTGAAAGTTTTCCGACCGCGATTCGCGGGCACGCCGT
GGGATTTGCAGCGGCGTGGAGCAAGGCGGGGGCGGCCATTGGCACGGCGG
TCTTCAAGCCCATCCTCGCCAGCTGGGGAGACGATGAATTTCGCGGTACG
CAGGCCGTGTTTCTCATTGGCTCCGGGTTCGCCGTCTTAGGGGGGCTACT
GGCCTGGTTTGTGTTCCAGGATGTGGACCACGCGCTGGACAACGAGGATC
AGGCTTGGAAGGACTATCTGGCTGCTAATGGTCATGGGGATGTGCAGTGG
GGCATTGCAAGCAACTCAACCCATGAGCTGGAATCGAAGGCAGTGCAGAT
GTAGATGGATCGCAAAAAGGATCAAGACTCGGTACAGACGACGGAAGCAG
CTCAGTCCGCCAAACAGACACAGGTGCAGATATCATCAGATGCCGCCGAA
GATGTGGCCCCAGATCAAAGCCGTCGAAAGACTTCCAAACTTTCGGTCTT
GCTGATGATTGTGTTTTCCGGTCTGGCCATTGGCTCCGACGGTTTTAACG
CATCCATCATCGGCAACCTCGAATTGATCATGGAAGTCATCTACCCAAAG
GCTCTCACCACGGCTGTCGCATCTCGTCTGTCCAATGCCTTCATGGTAGG
TATGATCATTGGCATGTTATCCTTCGGATACCTGTCCGATAGGTTGGGCC
GGAAGACTGGCGCAGTCTTGACCACCGTTATCCTAGTGCTAGGGATCGCT
TTGAGCGCTGGTGCGAGCGGAACGAATCGAGATGGGATGTTTTGGATGCT
GATCATCGCAAGAGGAATCGCTGGCGTGGGTGCGGGTGGGGAGTATCCGG
TCGCCGGGGCTGGAGCTGCAGAAGCCACCGACGAGGATCTGGGCGTCCGA
AACAAACGCGGGTTTATATTTGCCATGATCGCCGACCTGTCGGCCTCGCT
TGGGTTCGCCTTTGGTGCTCTGGTCCCTCTGCTGCTGCTGCTGTGCTTTC
ACCAACAGATCCATCATTATGAAGCCGTCTGGCGGATATCCCTCGCGCTG
GGGGTGATTCCGCCGCTCTCAATCTTCTGGTTCCGATATCGAATGGCAGT
CAGCTCGGCCTATCGCAAGAGTGCGATGCAGAAGCAAGCAGTGCCCTACT
GGTTGGCACTCAAGCGATATTGGCGTCCGTTGCTGGGCACTTGCGGATCC
TGGTTCATTTATAACTACATTTCGTACCCCTTTGGGCTGTTTTCATCTAC
GATTGTCGGTCGTGTGAACCCGACCTCCTCTCTGGCGCTGACAATGGCCT
GGGGCACTCTTATCAACTGTTTCTACATTCCCGGGGCATTCATCGGGGGC
TTCCTGTCCGATCGGATTGGGCGGCGGCGGACCATGGCGCTCGGGTACTT
TCTCCAGGCGGCCCTGGGCTTCATCCTAGGTGGCGCGCTGGGACCTTTTG
AGAAATCGCTGCCGCTCTTCATTGTGCTCTATGGCATCTTCCTCACGCTG
GGAGAGGTGGGTCCCGGATCGACGATTGTCGTGACAGCCAGTGAAAGTTT
TCCGACCGCGATTCGCGGGCACGCCGTGGGATTTGCAGCGGCGTGGAGCA
AGGCGGGGGCGGCCATTGGCACGGCGGTCTTCAAGCCCATCCTCGCCAGC
TGGGGAGACGATGAATTTCGCGGTACGCAGGCCGTGTTTCTCATTGGCTC
CGGGTTCGCCGTCTTAGGGGGGCTACTGGCCTGGTTTGTGTTCCAGGATG
TGGACCACGCGCTGGACAACGAGGATCAGGCTTGGAAGGACTATCTGGCT
GCTAATGGTCATGGGGATGTGCAGTGGGGCATTGCAAGCAACTCAACCCA
TGAGCTGGAATCGAAGGCAGTGCAGATGTAG

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Cellular Component**
Term	Definition
GO:0016021	integral component of membrane

Vocabulary: **Biological Process**
Term	Definition
GO:0055085	transmembrane transport

Vocabulary: **Molecular Function**
Term	Definition
GO:0022857	transmembrane transporter activity

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type
CBS51388_001202	CBS51388_001202	Aspergillus niger CBS 513.88	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001202-T1.exon1	CBS51388_001202-T1.exon1	Aspergillus niger CBS 513.88	exon
CBS51388_001202-T1.exon2	CBS51388_001202-T1.exon2	Aspergillus niger CBS 513.88	exon
CBS51388_001202-T1.exon3	CBS51388_001202-T1.exon3	Aspergillus niger CBS 513.88	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001202-T1.cds	CBS51388_001202-T1.cds	Aspergillus niger CBS 513.88	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type
CBS51388_001202-T1	CBS51388_001202-T1-protein	Aspergillus niger CBS 513.88	polypeptide

Properties


Property Name	Value
Note	antiSMASH:Cluster_1.7
Note	SMCOG1074:major facilitator family transporter
DBxref	InterPro:IPR036259
DBxref	InterPro:IPR020846
DBxref	InterPro:IPR005829
DBxref	InterPro:IPR005828
DBxref	PFAM:PF07690
Product	hypothetical protein

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Aspergillus niger CBS 513.88 whole genome analysis	2021-11-01

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
An01	supercontig	An01:3567660..3569298 +

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CBS51388_001202-T1, CBS51388_001202-T1 (mRNA) Aspergillus niger CBS 513.88