You are here

CBS51388_001205-T1, CBS51388_001205-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001205-T1
Unique NameCBS51388_001205-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3573062..3574147+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001205-T1 ID=CBS51388_001205-T1|Name=CBS51388_001205-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1086bp|location=Sequence derived from alignment at An01:3573062..3574147+ (Aspergillus niger CBS 513.88)
ATGACCGTACCTCCCAACCCATCTCTGAGCGACTCCGCTACCGGTTATGT AGTGACCCATCGCGGCAGCGTCGTGGAAAACCGACACCAAGTGCACGCCG CCGTCACCGATGCCACGGGCCGCATCTTATATGCCGTGGGCGATCCCACG CGCGTCACCCTGGCCCGCTCGGCCGCGAAACCTGCCCAAGCCCTGGCGGT GGTGGAAACCGGCGCTCTCGAAAAGTTTGACTTCAACGAGGCGGATCTAG CGTTGATGTGCGCCTCCCACAGCAGTGAAGATCGCCATCTTGCCCGTGCT CGCGCCATGTTGAGCAAGGCCAATATGCAGGAAGAGGACTTACGGTGTGG GGGTCATGCGGCCCTGTCGGAGGCTGTCAATCGAGCCTGGATCAAGCAAG ACTGGATACCGACGGCCATCGCCAACAACTGCTCGGGCAAACATGCCGGT ATGCTGGCAGGTGCCAAAGCCCTGGGTGCCACTACTGCAGAGTACCACTG CCCCACCCACCCCCTTCAGCAGCAGGTTGCCCACGCCGTCGAGGAGTTGG CGGGCTTACCTTCAGATCGTGTCCAATGGGCCATCGACGGCTGTAACCTG CCGGCCCCCGCGCTGCCCCTTCAGCATCTGGCCGCTATCTACGCCCGCAT TGCCAATGCGGCTGATGCGGTCCCCTCGGATCATCTGTCTCCTCGAACGC AGGCCCTAGGTCGCATCTTTCGAGCGATGGCGGGCCATCCGGAACTGGTG GGAGGAGATGGTCGGTTCTGTACCGCGCTGATGCAGGCATTTGAGGGAGC TCTGATCGGCAAGGTGGGAGCGGACGGCTGTTACGCCATTGGGGTGCGTG CTTCAGATTACACGCAGCGGCTGGGTAGCAGCGGGGCTCTGGGGATTGCG GTTAAGATTGAGGATGGCAATCGGGAGATACTCTATGCCGCTGTGGTTGA GATCCTGCGCCGACTCCAGATCGGCTCTCCCGTGCAGCTGCAGTCGTTGG CCGCATTTCATAAACCCGAGATCCGAAACACGGCCGGCGTGGTGACAGGG CACACCTCGCACCAATTTCAAATGGGCAAGGTATAG
back to top

Coding sequence (CDS) from alignment at An01:3573062..3574147+

>CBS51388_001205-T1 ID=CBS51388_001205-T1|Name=CBS51388_001205-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1086bp|location=Sequence derived from alignment at An01:3573062..3574147+ (Aspergillus niger CBS 513.88)
ATGACCGTACCTCCCAACCCATCTCTGAGCGACTCCGCTACCGGTTATGT
AGTGACCCATCGCGGCAGCGTCGTGGAAAACCGACACCAAGTGCACGCCG
CCGTCACCGATGCCACGGGCCGCATCTTATATGCCGTGGGCGATCCCACG
CGCGTCACCCTGGCCCGCTCGGCCGCGAAACCTGCCCAAGCCCTGGCGGT
GGTGGAAACCGGCGCTCTCGAAAAGTTTGACTTCAACGAGGCGGATCTAG
CGTTGATGTGCGCCTCCCACAGCAGTGAAGATCGCCATCTTGCCCGTGCT
CGCGCCATGTTGAGCAAGGCCAATATGCAGGAAGAGGACTTACGGTGTGG
GGGTCATGCGGCCCTGTCGGAGGCTGTCAATCGAGCCTGGATCAAGCAAG
ACTGGATACCGACGGCCATCGCCAACAACTGCTCGGGCAAACATGCCGGT
ATGCTGGCAGGTGCCAAAGCCCTGGGTGCCACTACTGCAGAGTACCACTG
CCCCACCCACCCCCTTCAGCAGCAGGTTGCCCACGCCGTCGAGGAGTTGG
CGGGCTTACCTTCAGATCGTGTCCAATGGGCCATCGACGGCTGTAACCTG
CCGGCCCCCGCGCTGCCCCTTCAGCATCTGGCCGCTATCTACGCCCGCAT
TGCCAATGCGGCTGATGCGGTCCCCTCGGATCATCTGTCTCCTCGAACGC
AGGCCCTAGGTCGCATCTTTCGAGCGATGGCGGGCCATCCGGAACTGGTG
GGAGGAGATGGTCGGTTCTGTACCGCGCTGATGCAGGCATTTGAGGGAGC
TCTGATCGGCAAGGTGGGAGCGGACGGCTGTTACGCCATTGGGGTGCGTG
CTTCAGATTACACGCAGCGGCTGGGTAGCAGCGGGGCTCTGGGGATTGCG
GTTAAGATTGAGGATGGCAATCGGGAGATACTCTATGCCGCTGTGGTTGA
GATCCTGCGCCGACTCCAGATCGGCTCTCCCGTGCAGCTGCAGTCGTTGG
CCGCATTTCATAAACCCGAGATCCGAAACACGGCCGGCGTGGTGACAGGG
CACACCTCGCACCAATTTCAAATGGGCAAGGTATAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001205CBS51388_001205Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001205-T1.exon1CBS51388_001205-T1.exon1Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001205-T1.cdsCBS51388_001205-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001205-T1CBS51388_001205-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
NoteantiSMASH:Cluster_1.7
DBxrefInterPro:IPR010349
DBxrefPFAM:PF06089
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3573062..3574147 +