You are here

Home

CBS51388_001211-T1, CBS51388_001211-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001211-T1
Unique NameCBS51388_001211-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3584850..3586639-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001211-T1 ID=CBS51388_001211-T1|Name=CBS51388_001211-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1790bp|location=Sequence derived from alignment at An01:3584850..3586639- (Aspergillus niger CBS 513.88)
ATGTCTGACACCGCGCGGATCTCAGGCGGTTCATTCACGTCTCCTCCAGG
CAGAGACGTGGAATTAAATAGCTTCAAGGAAGCCTCTCAGACACGTTTGT
ACCCCTACAGTTCCAGGAAGGAGGAAGAGGGACGGGAGGATGAGCAACAA
CGGCCTGAGCGGGAAGAGGACACCGGCGCTCTAACAGGCTACAAGCTGGT
ATTGGTTACCGTCGGGCTCTGCTTCTGCATATTCTGTACCTCGCTCGACA
ATACCATCGTCGCCACTGCGGTTCCGAGAATCACCCAGCAGTTCCACTCT
CTGGATGATGTGGGGTGGTATGCCAGTGCCTACCTGCTCACAACTTGCGC
CGTGACCCTCCCCTTCGGGCGCCTCTACACCTTCTTCCCCATTAAATGGG
TCTATCTCAGTGCCTTGTTTGTCTTTGAACTTGGTTCCTTCATCTGCGGC
ATCACCCCTTCCTCGCTGGGTCTCATCTTGGGCCGCGCTGTGGCCGGCCT
GGGGGGAGGGGGGCTGTTCTCAGGTTCGCTCCTCATCATTACTCAATGCG
TGCCTTTGCGGCGAAGGCCGGCTTTCTCCGGGTTCATCATGAGCATCTTC
GCGGTGGCGAGCGTGATTGCACCTCTGTAAGCCTGTGGTCCTAAATGTAC
ATGCGGTTGCAAGACCGACATGAGCTCTTTATACCCGTGAGCTAACCTCT
TGGCTTGCCGTTTCTTAGGATGGGCGGAGCATTCACAGACCACATCTCGT
GGCGCTGGTGTTTTTATATCAATCTTCCGTTCGGCCTCGTCAGTGCTGTT
GTCATCTTCTTCACGTTCCAGACCACCAAGCCAGTGGTACAGGCAAGCCT
GCGAGAAAAGGCGGCTGGCCTTGATCCCCTGGGGACGGCCACCTTCCTGC
CAGCCATTGTGTGCCTCCTGCTAGCGACTCAATGGGGTGGTGCCCAATAC
CCCTGGGGCGATGGCCGCATAATCGCGCTGTTTACTCTCTTCGGGGTCCT
ACTTGCGTGCTTTGTAGGGCTACAGCTTTGGGCCCGCGAGCGAGCCACCC
TCCCACCGCGCCTTCTACGGGGCCGCAACATCTGGGGTTCTGCGTTGTAC
GGCTTCTGTCTCAATGGTGCCATGTTTACCTTTGTCTACTACCTCCCCAT
ATGGTTCCAAGCTGTTCAGGGGACCTCTGCCACGGAGTCGGGCATACGGA
ACCTGCCGCTCGTCATATCCAACGTGATATTCGCCATCATCTCTGGCGTG
CTGGTGAGCGCGACCGGTTACTTTGGCCCTTTCATGCTCCTGAGCGCGGC
TATGGCTAGTATCGCCGCTGGGCTGCTCTCGATGTTGCATCCAAGTTCCG
GGGCAGGTGAATGGATCGGATACCAGGTGCTTCTGGGATCGAGCATCGGC
ATGGGCTTCCAGCTGCCTGTATTCGTCGTTCAGACCACCCTGGCCTCCAC
TGATATCCCCACCGCCACCGCTCTGATGACTTTCATTCAGCTCCTTGGCG
GTGCTATCTTCGTCTCTGTCGCGCAGAATGTGTTTCGCAATCAGTTAGCT
GCCGACATCCGCGCGGCCTTGCCGATGCTGGACCCTAAGGCAGTGATTAA
TGCCGGTCCTACCAGTCTGAGGGCAATGTACTCGGGGGAGACTCTTACAA
CTCTAGTTGCTATGTATAATGATGCCGTAGTGCACACCTTCTACCTTGCC
ATTGGCTTAGCTGCTGCCTCCTTCCTCGCCGCAACGGTCATCCAGTGGCG
GCCCTCGCCGAAATCAATCAGCCACCCCGACTCTTCCTGA
back to top

Coding sequence (CDS) from alignment at An01:3584850..3586639-

>CBS51388_001211-T1 ID=CBS51388_001211-T1|Name=CBS51388_001211-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3396bp|location=Sequence derived from alignment at An01:3584850..3586639- (Aspergillus niger CBS 513.88)
GATGGGCGGAGCATTCACAGACCACATCTCGTGGCGCTGGTGTTTTTATA
TCAATCTTCCGTTCGGCCTCGTCAGTGCTGTTGTCATCTTCTTCACGTTC
CAGACCACCAAGCCAGTGGTACAGGCAAGCCTGCGAGAAAAGGCGGCTGG
CCTTGATCCCCTGGGGACGGCCACCTTCCTGCCAGCCATTGTGTGCCTCC
TGCTAGCGACTCAATGGGGTGGTGCCCAATACCCCTGGGGCGATGGCCGC
ATAATCGCGCTGTTTACTCTCTTCGGGGTCCTACTTGCGTGCTTTGTAGG
GCTACAGCTTTGGGCCCGCGAGCGAGCCACCCTCCCACCGCGCCTTCTAC
GGGGCCGCAACATCTGGGGTTCTGCGTTGTACGGCTTCTGTCTCAATGGT
GCCATGTTTACCTTTGTCTACTACCTCCCCATATGGTTCCAAGCTGTTCA
GGGGACCTCTGCCACGGAGTCGGGCATACGGAACCTGCCGCTCGTCATAT
CCAACGTGATATTCGCCATCATCTCTGGCGTGCTGGTGAGCGCGACCGGT
TACTTTGGCCCTTTCATGCTCCTGAGCGCGGCTATGGCTAGTATCGCCGC
TGGGCTGCTCTCGATGTTGCATCCAAGTTCCGGGGCAGGTGAATGGATCG
GATACCAGGTGCTTCTGGGATCGAGCATCGGCATGGGCTTCCAGCTGCCT
GTATTCGTCGTTCAGACCACCCTGGCCTCCACTGATATCCCCACCGCCAC
CGCTCTGATGACTTTCATTCAGCTCCTTGGCGGTGCTATCTTCGTCTCTG
TCGCGCAGAATGTGTTTCGCAATCAGTTAGCTGCCGACATCCGCGCGGCC
TTGCCGATGCTGGACCCTAAGGCAGTGATTAATGCCGGTCCTACCAGTCT
GAGGGCAATGTACTCGGGGGAGACTCTTACAACTCTAGTTGCTATGTATA
ATGATGCCGTAGTGCACACCTTCTACCTTGCCATTGGCTTAGCTGCTGCC
TCCTTCCTCGCCGCAACGGTCATCCAGTGGCGGCCCTCGCCGAAATCAAT
CAGCCACCCCGACTCTTCCTGAATGTCTGACACCGCGCGGATCTCAGGCG
GTTCATTCACGTCTCCTCCAGGCAGAGACGTGGAATTAAATAGCTTCAAG
GAAGCCTCTCAGACACGTTTGTACCCCTACAGTTCCAGGAAGGAGGAAGA
GGGACGGGAGGATGAGCAACAACGGCCTGAGCGGGAAGAGGACACCGGCG
CTCTAACAGGCTACAAGCTGGTATTGGTTACCGTCGGGCTCTGCTTCTGC
ATATTCTGTACCTCGCTCGACAATACCATCGTCGCCACTGCGGTTCCGAG
AATCACCCAGCAGTTCCACTCTCTGGATGATGTGGGGTGGTATGCCAGTG
CCTACCTGCTCACAACTTGCGCCGTGACCCTCCCCTTCGGGCGCCTCTAC
ACCTTCTTCCCCATTAAATGGGTCTATCTCAGTGCCTTGTTTGTCTTTGA
ACTTGGTTCCTTCATCTGCGGCATCACCCCTTCCTCGCTGGGTCTCATCT
TGGGCCGCGCTGTGGCCGGCCTGGGGGGAGGGGGGCTGTTCTCAGGTTCG
CTCCTCATCATTACTCAATGCGTGCCTTTGCGGCGAAGGCCGGCTTTCTC
CGGGTTCATCATGAGCATCTTCGCGGTGGCGAGCGTGATTGCACCTCTGA
TGGGCGGAGCATTCACAGACCACATCTCGTGGCGCTGGTGTTTTTATATC
AATCTTCCGTTCGGCCTCGTCAGTGCTGTTGTCATCTTCTTCACGTTCCA
GACCACCAAGCCAGTGGTACAGGCAAGCCTGCGAGAAAAGGCGGCTGGCC
TTGATCCCCTGGGGACGGCCACCTTCCTGCCAGCCATTGTGTGCCTCCTG
CTAGCGACTCAATGGGGTGGTGCCCAATACCCCTGGGGCGATGGCCGCAT
AATCGCGCTGTTTACTCTCTTCGGGGTCCTACTTGCGTGCTTTGTAGGGC
TACAGCTTTGGGCCCGCGAGCGAGCCACCCTCCCACCGCGCCTTCTACGG
GGCCGCAACATCTGGGGTTCTGCGTTGTACGGCTTCTGTCTCAATGGTGC
CATGTTTACCTTTGTCTACTACCTCCCCATATGGTTCCAAGCTGTTCAGG
GGACCTCTGCCACGGAGTCGGGCATACGGAACCTGCCGCTCGTCATATCC
AACGTGATATTCGCCATCATCTCTGGCGTGCTGGTGAGCGCGACCGGTTA
CTTTGGCCCTTTCATGCTCCTGAGCGCGGCTATGGCTAGTATCGCCGCTG
GGCTGCTCTCGATGTTGCATCCAAGTTCCGGGGCAGGTGAATGGATCGGA
TACCAGGTGCTTCTGGGATCGAGCATCGGCATGGGCTTCCAGCTGCCTGT
ATTCGTCGTTCAGACCACCCTGGCCTCCACTGATATCCCCACCGCCACCG
CTCTGATGACTTTCATTCAGCTCCTTGGCGGTGCTATCTTCGTCTCTGTC
GCGCAGAATGTGTTTCGCAATCAGTTAGCTGCCGACATCCGCGCGGCCTT
GCCGATGCTGGACCCTAAGGCAGTGATTAATGCCGGTCCTACCAGTCTGA
GGGCAATGTACTCGGGGGAGACTCTTACAACTCTAGTTGCTATGTATAAT
GATGCCGTAGTGCACACCTTCTACCTTGCCATTGGCTTAGCTGCTGCCTC
CTTCCTCGCCGCAACGGTCATCCAGTGGCGGCCCTCGCCGAAATCAATCA
GCCACCCCGACTCTTCCTGAATGTCTGACACCGCGCGGATCTCAGGCGGT
TCATTCACGTCTCCTCCAGGCAGAGACGTGGAATTAAATAGCTTCAAGGA
AGCCTCTCAGACACGTTTGTACCCCTACAGTTCCAGGAAGGAGGAAGAGG
GACGGGAGGATGAGCAACAACGGCCTGAGCGGGAAGAGGACACCGGCGCT
CTAACAGGCTACAAGCTGGTATTGGTTACCGTCGGGCTCTGCTTCTGCAT
ATTCTGTACCTCGCTCGACAATACCATCGTCGCCACTGCGGTTCCGAGAA
TCACCCAGCAGTTCCACTCTCTGGATGATGTGGGGTGGTATGCCAGTGCC
TACCTGCTCACAACTTGCGCCGTGACCCTCCCCTTCGGGCGCCTCTACAC
CTTCTTCCCCATTAAATGGGTCTATCTCAGTGCCTTGTTTGTCTTTGAAC
TTGGTTCCTTCATCTGCGGCATCACCCCTTCCTCGCTGGGTCTCATCTTG
GGCCGCGCTGTGGCCGGCCTGGGGGGAGGGGGGCTGTTCTCAGGTTCGCT
CCTCATCATTACTCAATGCGTGCCTTTGCGGCGAAGGCCGGCTTTCTCCG
GGTTCATCATGAGCATCTTCGCGGTGGCGAGCGTGATTGCACCTCT
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016021integral component of membrane
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001211CBS51388_001211Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001211-T1CBS51388_001211-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001211-T1.cdsCBS51388_001211-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001211-T1.exon2CBS51388_001211-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001211-T1.exon1CBS51388_001211-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR005829
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3584850..3586639 -
Powered by Drupal