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CBS51388_001220-T1, CBS51388_001220-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001220-T1
Unique NameCBS51388_001220-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An01:3607086..3608716-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001220-T1 ID=CBS51388_001220-T1|Name=CBS51388_001220-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1631bp|location=Sequence derived from alignment at An01:3607086..3608716- (Aspergillus niger CBS 513.88)
ATGGGCGACATGTACTCGGAAGCCGAGTTGGAGCGACTTGGTCGCATGAG
GCCGACTATCTTCCCTAATTTGCTATCGGAACTGGGATTTTGCTTTTCGC
TCGTGCTCTCGCAGATTATGGCAGTAAGTTTCAGCAGGGTTTCTTCTGTT
CACCGGTATAGACATCCGTCTTGGGGGACCTATGCGCTGACCTGCATCAG
GAATACTTCATTTCCGGCTTCAATGTTCTCCTCCCCTCTTTAGCTGAGGG
ACTGGACATCCCAGAAGCCTCGTCCAGCTGGCCATCGAGTGCCTTTGCCC
TGACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCGTCTGGCGGATCGCTAT
GGAGGGTTTGTCGTCTTCGCAGGAGGGTTGGCCTGGCATCTTGTCTGGTC
GCTCGTTGCCGGTTTCGCCAAGAATGCCCTCATGATGTATTTTTGTCGGG
CGTTGCAGGGTTTTGGCCCGGCTGCTTTTCTTTCGGCTGGAATCATGCTC
TTGGGCACTACCTATCGTCCGGGATGGCGCAAGAACTTGGTGTTCAGTAT
CTACGGCGCCTGCGCGCCCATCGGATTTGTCGCCGGAATCTTTGTCTCCG
GCATGACTGGACAGTTTCTCGACTGGCGCTGGTATTTTTGGATCGGGACG
ATGTTGCTCTTCCTGGCTCTCATCGCAGCTGTCCTCTCCGTCCCAGCCAG
TATTCGCCGCAAGCCTCCGCACCCTGACATGTCCATAGATTGGGCTGGCG
CCGGTCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTCGCCATCAACGAT
TGCGGCCATGCACCCGACGGCTGGCGAACACCTTACGTGTATATCACGTT
GATTGTGGGCTTTTTTGTGCTGCTAGCTGCGATCTACGTCGAAGGTTGGG
TGGCCAAGGAGCCACTTCTTCCTCTTAGTCTCTTCCGCATCCCCCAACTA
TCGTCCCTACTCCTCGGACTGTTCTGCTTCTACGGCGTGTTTGGCATCTG
GCTGCTGTACTGTGTGGAGTACATGGAGAATATCATGCACGCCTCGCCCC
TGCTCGTGGTAGCATACTTTGTCCCCTTCGCATTAGGTGGCATCTTCTTT
AGCCTGATTGGAGGCTTATTCCTGCATGTTCTTCCCGGCACGGTTCTTCT
TGTGATCTCGGGCATTGGATGGCTGATGGCACCACTGCTATTTGCTATCA
TGCCGCTCGGAGCCAGCTACTGGCCCTACGTATTTCCGGCCATGATCTGC
GGCACCCTGGGCATGGATGTCACGTACAATGTGACCAACATCTTCGTTAC
TACCTCTCTTCCCGAGCGACAACAAGGGCTCGCCGCTGCGGTCGCCAACA
GCGTTTTGTTCTTGGGCATTAGTTTTTGGCTGGGGTGGGGTGACTTCACC
TCGGCGCAGGTGAAGGGAGACTTGCGCTCGAGATACCAGGCTCCACTCTG
GATGGCGGTGGGGTTGGCCGGGCTGGGACTGATCATCATGGTGCTCTTTG
TGAAGATTAAGCCCGCCAAGAGTGAGGTGACAGTGGATGAGAAGGAATGT
AACTCAGGAGACACGGAGATGGTGCCCAAGCAGGAGACAGACATTGCAGT
GAATGGACGGGATGGGGATGTCCTGCAATAA
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Coding sequence (CDS) from alignment at An01:3607086..3608716-

>CBS51388_001220-T1 ID=CBS51388_001220-T1|Name=CBS51388_001220-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3108bp|location=Sequence derived from alignment at An01:3607086..3608716- (Aspergillus niger CBS 513.88)
GAATACTTCATTTCCGGCTTCAATGTTCTCCTCCCCTCTTTAGCTGAGGG
ACTGGACATCCCAGAAGCCTCGTCCAGCTGGCCATCGAGTGCCTTTGCCC
TGACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCGTCTGGCGGATCGCTAT
GGAGGGTTTGTCGTCTTCGCAGGAGGGTTGGCCTGGCATCTTGTCTGGTC
GCTCGTTGCCGGTTTCGCCAAGAATGCCCTCATGATGTATTTTTGTCGGG
CGTTGCAGGGTTTTGGCCCGGCTGCTTTTCTTTCGGCTGGAATCATGCTC
TTGGGCACTACCTATCGTCCGGGATGGCGCAAGAACTTGGTGTTCAGTAT
CTACGGCGCCTGCGCGCCCATCGGATTTGTCGCCGGAATCTTTGTCTCCG
GCATGACTGGACAGTTTCTCGACTGGCGCTGGTATTTTTGGATCGGGACG
ATGTTGCTCTTCCTGGCTCTCATCGCAGCTGTCCTCTCCGTCCCAGCCAG
TATTCGCCGCAAGCCTCCGCACCCTGACATGTCCATAGATTGGGCTGGCG
CCGGTCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTCGCCATCAACGAT
TGCGGCCATGCACCCGACGGCTGGCGAACACCTTACGTGTATATCACGTT
GATTGTGGGCTTTTTTGTGCTGCTAGCTGCGATCTACGTCGAAGGTTGGG
TGGCCAAGGAGCCACTTCTTCCTCTTAGTCTCTTCCGCATCCCCCAACTA
TCGTCCCTACTCCTCGGACTGTTCTGCTTCTACGGCGTGTTTGGCATCTG
GCTGCTGTACTGTGTGGAGTACATGGAGAATATCATGCACGCCTCGCCCC
TGCTCGTGGTAGCATACTTTGTCCCCTTCGCATTAGGTGGCATCTTCTTT
AGCCTGATTGGAGGCTTATTCCTGCATGTTCTTCCCGGCACGGTTCTTCT
TGTGATCTCGGGCATTGGATGGCTGATGGCACCACTGCTATTTGCTATCA
TGCCGCTCGGAGCCAGCTACTGGCCCTACGTATTTCCGGCCATGATCTGC
GGCACCCTGGGCATGGATGTCACGTACAATGTGACCAACATCTTCGTTAC
TACCTCTCTTCCCGAGCGACAACAAGGGCTCGCCGCTGCGGTCGCCAACA
GCGTTTTGTTCTTGGGCATTAGTTTTTGGCTGGGGTGGGGTGACTTCACC
TCGGCGCAGGTGAAGGGAGACTTGCGCTCGAGATACCAGGCTCCACTCTG
GATGGCGGTGGGGTTGGCCGGGCTGGGACTGATCATCATGGTGCTCTTTG
TGAAGATTAAGCCCGCCAAGAGTGAGGTGACAGTGGATGAGAAGGAATGT
AACTCAGGAGACACGGAGATGGTGCCCAAGCAGGAGACAGACATTGCAGT
GAATGGACGGGATGGGGATGTCCTGCAATAAATGGGCGACATGTACTCGG
AAGCCGAGTTGGAGCGACTTGGTCGCATGAGGCCGACTATCTTCCCTAAT
TTGCTATCGGAACTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAGATTAT
GGCAGAATACTTCATTTCCGGCTTCAATGTTCTCCTCCCCTCTTTAGCTG
AGGGACTGGACATCCCAGAAGCCTCGTCCAGCTGGCCATCGAGTGCCTTT
GCCCTGACGGCGGGTGGTTCGTTGCTCTTCTTCGGCCGTCTGGCGGATCG
CTATGGAGGGTTTGTCGTCTTCGCAGGAGGGTTGGCCTGGCATCTTGTCT
GGTCGCTCGTTGCCGGTTTCGCCAAGAATGCCCTCATGATGTATTTTTGT
CGGGCGTTGCAGGGTTTTGGCCCGGCTGCTTTTCTTTCGGCTGGAATCAT
GCTCTTGGGCACTACCTATCGTCCGGGATGGCGCAAGAACTTGGTGTTCA
GTATCTACGGCGCCTGCGCGCCCATCGGATTTGTCGCCGGAATCTTTGTC
TCCGGCATGACTGGACAGTTTCTCGACTGGCGCTGGTATTTTTGGATCGG
GACGATGTTGCTCTTCCTGGCTCTCATCGCAGCTGTCCTCTCCGTCCCAG
CCAGTATTCGCCGCAAGCCTCCGCACCCTGACATGTCCATAGATTGGGCT
GGCGCCGGTCTCTTCTTTTGCAGTCTGGTGCTGATATTTTTCGCCATCAA
CGATTGCGGCCATGCACCCGACGGCTGGCGAACACCTTACGTGTATATCA
CGTTGATTGTGGGCTTTTTTGTGCTGCTAGCTGCGATCTACGTCGAAGGT
TGGGTGGCCAAGGAGCCACTTCTTCCTCTTAGTCTCTTCCGCATCCCCCA
ACTATCGTCCCTACTCCTCGGACTGTTCTGCTTCTACGGCGTGTTTGGCA
TCTGGCTGCTGTACTGTGTGGAGTACATGGAGAATATCATGCACGCCTCG
CCCCTGCTCGTGGTAGCATACTTTGTCCCCTTCGCATTAGGTGGCATCTT
CTTTAGCCTGATTGGAGGCTTATTCCTGCATGTTCTTCCCGGCACGGTTC
TTCTTGTGATCTCGGGCATTGGATGGCTGATGGCACCACTGCTATTTGCT
ATCATGCCGCTCGGAGCCAGCTACTGGCCCTACGTATTTCCGGCCATGAT
CTGCGGCACCCTGGGCATGGATGTCACGTACAATGTGACCAACATCTTCG
TTACTACCTCTCTTCCCGAGCGACAACAAGGGCTCGCCGCTGCGGTCGCC
AACAGCGTTTTGTTCTTGGGCATTAGTTTTTGGCTGGGGTGGGGTGACTT
CACCTCGGCGCAGGTGAAGGGAGACTTGCGCTCGAGATACCAGGCTCCAC
TCTGGATGGCGGTGGGGTTGGCCGGGCTGGGACTGATCATCATGGTGCTC
TTTGTGAAGATTAAGCCCGCCAAGAGTGAGGTGACAGTGGATGAGAAGGA
ATGTAACTCAGGAGACACGGAGATGGTGCCCAAGCAGGAGACAGACATTG
CAGTGAATGGACGGGATGGGGATGTCCTGCAATAAATGGGCGACATGTAC
TCGGAAGCCGAGTTGGAGCGACTTGGTCGCATGAGGCCGACTATCTTCCC
TAATTTGCTATCGGAACTGGGATTTTGCTTTTCGCTCGTGCTCTCGCAGA
TTATGGCA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0055085transmembrane transport
Vocabulary: Molecular Function
TermDefinition
GO:0022857transmembrane transporter activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001220CBS51388_001220Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001220-T1CBS51388_001220-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001220-T1.cdsCBS51388_001220-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001220-T1.exon2CBS51388_001220-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001220-T1.exon1CBS51388_001220-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR036259
DBxrefInterPro:IPR020846
DBxrefInterPro:IPR011701
DBxrefPFAM:PF07690
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An01supercontigAn01:3607086..3608716 -
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