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CBS51388_001272-T1, CBS51388_001272-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001272-T1
Unique NameCBS51388_001272-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:109430..111807+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001272-T1 ID=CBS51388_001272-T1|Name=CBS51388_001272-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2378bp|location=Sequence derived from alignment at An02:109430..111807+ (Aspergillus niger CBS 513.88)
ATGGAGTGCCATGACACCTCACAGATACCCAAATACATGGAATTCCTGGA
GGAACAAAGACAGATCCTGAAAGATGTCCAGTCTCGCAAGGGCCAGCCGG
CCAAACCGACAAAGTCCCGCGACGAAATAATCAAGCGGTTCATTCATTAC
TACTTCGCGGAGACTAGCTCACCTGTAGACAAGAACGCTATTCGCACCTC
ATTCGTGCCTCCTGCGTACCCACCCTCCATTGAGGCGTTGAGTGATTTGA
AGAAGGCTCTCATTAAGGATCTCACCATCGAGACTCATCATCGTGGCTCT
TACACTCTGTTGAGAGCAGTCACTCCAGCATTCAGAAAGACGGGGATTAT
GGCCGTGGTAGAAGATGAGGAAGGAGACGTTCTTACGTTGCAATTGTATA
ACCAGGATAGGGACCTCGTTACTGATGGGCGGCTCGTTGATGGGACAATC
ATGCTCATAAAAGAGCCTTACCTGAAAGTAATGGGTGATGGTGATTATGG
ACTGCGGGTCGACCACCTTTCTGATATCAGGTTCATCCTGGAGAATGATC
CTCTGGTGCCCGCTATCTGGAGGGACGAGTCAGAAGATCGTGGCTCTGCT
AACTCCTGGAGGAAAACTGGGAACAATCTCTACGAGCTTAAGGAATACCA
TCTTGCTCTCAATTGGTATATAATAGCCCGAATCTGAGAATACTAGAAAG
CAACGCTGACCAAGGCACAGTTATTCCAAAGCTCTAGATTGTTCGACGAC
TCCTAAGGATGAGCTTGCCCTAAGGCTCAACCGTGCTCAGACATTCCTCA
AAACGAATCAGTTCGACGCGGCCCTACGTGATGTCGAGCACATCCTATCC
AAGGACAAGTTCGTCGAGAAAGCATTGTTCCGCAAAGCCCAGGCCCTTTA
CTATCTTCAGAGATATCAGCAGTCCTGTGATGTTTACGTCGACCTTTGCA
AGGCCTATCCAAACAACGCCACTGCTAAAAGCGAGTTTGCTCGAGCCACA
GCACGGCTTTTCGAGCAGCGGACTGGCGAATACCCATTTAAACAAATGCA
ACAAGAGGCAACGAAGCTTAAGCCCCCGCATTTCGATCTTGCAACGTATA
TTGGCCCTGTTGCGGTGAGACCCTCGACCCATGGACGTGGTTTGTTTACA
ACACAGGCGGTCCGTGCCGGCGACCTTCTCATATGCGAAAAGGCCTTTGC
GCATGCCTTTCATGACGACGGCGATAATACCAACGTTTCGATATTGGTGT
ACGCCGACACAAACAGTATGAAAGTGGGAACCCAGGCCGAATTGAATAGT
CTCATCGCACGAAAGCTGCAAAAGAATCCATCGTTGATTCCAGCATTCAA
TGACCTGTACCACGGCTCATATACACCGGTGGGCGTCTCTGAGGTCGACG
GTTCACCTGTCGTTGATACGTAAGTACTTCCCCTCGCGCAAGCAACATGA
GACTAATATTTCCAGTTTCCTGGTTGAGCGAATAATGTCCCTCAATGGTT
TCGGCTGCTCGACCACCTCCCGTACAGCGCATATAGCCAGGGTTAATGCT
GACAACAGGGAACCTCACACCGAGGAGGAACATTTTTATTCCAGTGGAGT
CTGGCGTCTCGCATCTTACGTAAATCACTCCTGTTACCCGAACACCCACC
GTGCATTCATCGGGGACATGATGGTAGTTCGCGCTACACAGGACCTTCCC
GCAAACACGGAGCTCAAATTCTGGTACCGAACACCCGTGGATGATGGTAC
TGCAGAAGACATATACCAGAAATATTGGGGATTCCAATGTGACTGCGTTA
TCTGTAAGGATGTGCGCGAAACCGGGGAAGGCAATATGGCGAAGCGGAGA
GAACTCATGGCTGCTTCGGACTCGTCTATGAATATCGTAGCTAAGGCCTA
CGGGTCCTCATTCAGCCTCCAGGAACAGAGTGTTGCGATTACTATGACAG
AAGCCGCCATTGTTATGATCGAGAAAACGTATCGGCGATCACCCTTGGAA
GTGCCTCGTCTTGGGATCTGTAAAACAGGCTTGTTTTTGGCAGAGGTGCA
TGCCACCCACGGCCGTTGGCGGAAAGCCATTGGATACGCTATCAGAACGC
TGGAGTCGCTTGGCTACGTGATTGAAGGTTGGCAAGTTCCGTATAAGGAA
GGTAGAAAGTTACATGTCAAGCGGTGGGGACTGGCGATGGATGTTCTTGT
TCGCTGCTGGATGATCCTTTGCCGCGCGTATGGTGAGGTAGCACCTGAGC
TTGCTGACCAAGCTGAATACTACGCGAGAACAACGTACAGAATATGCATT
GGTGAGGATGAAACATTTGAGGATACTTATAATCGGTCCTCTCACCGAGT
CGATGGAATGATTGTGCACGGTAGTTGA
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Coding sequence (CDS) from alignment at An02:109430..111807+

>CBS51388_001272-T1 ID=CBS51388_001272-T1|Name=CBS51388_001272-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6552bp|location=Sequence derived from alignment at An02:109430..111807+ (Aspergillus niger CBS 513.88)
ATGGAGTGCCATGACACCTCACAGATACCCAAATACATGGAATTCCTGGA
GGAACAAAGACAGATCCTGAAAGATGTCCAGTCTCGCAAGGGCCAGCCGG
CCAAACCGACAAAGTCCCGCGACGAAATAATCAAGCGGTTCATTCATTAC
TACTTCGCGGAGACTAGCTCACCTGTAGACAAGAACGCTATTCGCACCTC
ATTCGTGCCTCCTGCGTACCCACCCTCCATTGAGGCGTTGAGTGATTTGA
AGAAGGCTCTCATTAAGGATCTCACCATCGAGACTCATCATCGTGGCTCT
TACACTCTGTTGAGAGCAGTCACTCCAGCATTCAGAAAGACGGGGATTAT
GGCCGTGGTAGAAGATGAGGAAGGAGACGTTCTTACGTTGCAATTGTATA
ACCAGGATAGGGACCTCGTTACTGATGGGCGGCTCGTTGATGGGACAATC
ATGCTCATAAAAGAGCCTTACCTGAAAGTAATGGGTGATGGTGATTATGG
ACTGCGGGTCGACCACCTTTCTGATATCAGGTTCATCCTGGAGAATGATC
CTCTGGTGCCCGCTATCTGGAGGGACGAGTCAGAAGATCGTGGCTCTGCT
AACTCCTGGAGGAAAACTGGGAACAATCTCTACGAGCTTAAGGAATACCA
TCTTGCTCTCAATTGTTATTCCAAAGCTCTAGATTGTTCGACGACTCCTA
AGGATGAGCTTGCCCTAAGGCTCAACCGTGCTCAGACATTCCTCAAAACG
AATCAGTTCGACGCGGCCCTACGTGATGTCGAGCACATCCTATCCAAGGA
CAAGTTCGTCGAGAAAGCATTGTTCCGCAAAGCCCAGGCCCTTTACTATC
TTCAGAGATATCAGCAGTCCTGTGATGTTTACGTCGACCTTTGCAAGGCC
TATCCAAACAACGCCACTGCTAAAAGCGAGTTTGCTCGAGCCACAGCACG
GCTTTTCGAGCAGCGGACTGGCGAATACCCATTTAAACAAATGCAACAAG
AGGCAACGAAGCTTAAGCCCCCGCATTTCGATCTTGCAACGTATATTGGC
CCTGTTGCGGTGAGACCCTCGACCCATGGACGTGGTTTGTTTACAACACA
GGCGGTCCGTGCCGGCGACCTTCTCATATGCGAAAAGGCCTTTGCGCATG
CCTTTCATGACGACGGCGATAATACCAACGTTTCGATATTGGTGTACGCC
GACACAAACAGTATGAAAGTGGGAACCCAGGCCGAATTGAATAGTCTCAT
CGCACGAAAGCTGCAAAAGAATCCATCGTTGATTCCAGCATTCAATGACC
TGTACCACGGCTCATATACACCGGTGGGCGTCTCTGAGGTCGACGGTTCA
CCTGTCGTTGATACGGAACCTCACACCGAGGAGGAACATTTTTATTCCAG
TGGAGTCTGGCGTCTCGCATCTTACGTAAATCACTCCTGTTACCCGAACA
CCCACCGTGCATTCATCGGGGACATGATGGTAGTTCGCGCTACACAGGAC
CTTCCCGCAAACACGGAGCTCAAATTCTGGTACCGAACACCCGTGGATGA
TGGTACTGCAGAAGACATATACCAGAAATATTGGGGATTCCAATGTGACT
GCGTTATCTGTAAGGATGTGCGCGAAACCGGGGAAGGCAATATGGCGAAG
CGGAGAGAACTCATGGCTGCTTCGGACTCGTCTATGAATATCGTAGCTAA
GGCCTACGGGTCCTCATTCAGCCTCCAGGAACAGAGTGTTGCGATTACTA
TGACAGAAGCCGCCATTGTTATGATCGAGAAAACGTATCGGCGATCACCC
TTGGAAGTGCCTCGTCTTGGGATCTGTAAAACAGGCTTGTTTTTGGCAGA
GGTGCATGCCACCCACGGCCGTTGGCGGAAAGCCATTGGATACGCTATCA
GAACGCTGGAGTCGCTTGGCTACGTGATTGAAGGTTGGCAAGTTCCGTAT
AAGGAAGGTAGAAAGTTACATGTCAAGCGGTGGGGACTGGCGATGGATGT
TCTTGTTCGCTGCTGGATGATCCTTTGCCGCGCGTATGGTGAGGTAGCAC
CTGAGCTTGCTGACCAAGCTGAATACTACGCGAGAACAACGTACAGAATA
TGCATTGGTGAGGATGAAACATTTGAGGATACTTATAATCGGTCCTCTCA
CCGAGTCGATGGAATGATTGTGCACGGTAGTTGAATGGAGTGCCATGACA
CCTCACAGATACCCAAATACATGGAATTCCTGGAGGAACAAAGACAGATC
CTGAAAGATGTCCAGTCTCGCAAGGGCCAGCCGGCCAAACCGACAAAGTC
CCGCGACGAAATAATCAAGCGGTTCATTCATTACTACTTCGCGGAGACTA
GCTCACCTGTAGACAAGAACGCTATTCGCACCTCATTCGTGCCTCCTGCG
TACCCACCCTCCATTGAGGCGTTGAGTGATTTGAAGAAGGCTCTCATTAA
GGATCTCACCATCGAGACTCATCATCGTGGCTCTTACACTCTGTTGAGAG
CAGTCACTCCAGCATTCAGAAAGACGGGGATTATGGCCGTGGTAGAAGAT
GAGGAAGGAGACGTTCTTACGTTGCAATTGTATAACCAGGATAGGGACCT
CGTTACTGATGGGCGGCTCGTTGATGGGACAATCATGCTCATAAAAGAGC
CTTACCTGAAAGTAATGGGTGATGGTGATTATGGACTGCGGGTCGACCAC
CTTTCTGATATCAGGTTCATCCTGGAGAATGATCCTCTGGTGCCCGCTAT
CTGGAGGGACGAGTCAGAAGATCGTGGCTCTGCTAACTCCTGGAGGAAAA
CTGGGAACAATCTCTACGAGCTTAAGGAATACCATCTTGCTCTCAATTGT
TATTCCAAAGCTCTAGATTGTTCGACGACTCCTAAGGATGAGCTTGCCCT
AAGGCTCAACCGTGCTCAGACATTCCTCAAAACGAATCAGTTCGACGCGG
CCCTACGTGATGTCGAGCACATCCTATCCAAGGACAAGTTCGTCGAGAAA
GCATTGTTCCGCAAAGCCCAGGCCCTTTACTATCTTCAGAGATATCAGCA
GTCCTGTGATGTTTACGTCGACCTTTGCAAGGCCTATCCAAACAACGCCA
CTGCTAAAAGCGAGTTTGCTCGAGCCACAGCACGGCTTTTCGAGCAGCGG
ACTGGCGAATACCCATTTAAACAAATGCAACAAGAGGCAACGAAGCTTAA
GCCCCCGCATTTCGATCTTGCAACGTATATTGGCCCTGTTGCGGTGAGAC
CCTCGACCCATGGACGTGGTTTGTTTACAACACAGGCGGTCCGTGCCGGC
GACCTTCTCATATGCGAAAAGGCCTTTGCGCATGCCTTTCATGACGACGG
CGATAATACCAACGTTTCGATATTGGTGTACGCCGACACAAACAGTATGA
AAGTGGGAACCCAGGCCGAATTGAATAGTCTCATCGCACGAAAGCTGCAA
AAGAATCCATCGTTGATTCCAGCATTCAATGACCTGTACCACGGCTCATA
TACACCGGTGGGCGTCTCTGAGGTCGACGGTTCACCTGTCGTTGATACGG
AACCTCACACCGAGGAGGAACATTTTTATTCCAGTGGAGTCTGGCGTCTC
GCATCTTACGTAAATCACTCCTGTTACCCGAACACCCACCGTGCATTCAT
CGGGGACATGATGGTAGTTCGCGCTACACAGGACCTTCCCGCAAACACGG
AGCTCAAATTCTGGTACCGAACACCCGTGGATGATGGTACTGCAGAAGAC
ATATACCAGAAATATTGGGGATTCCAATGTGACTGCGTTATCTGTAAGGA
TGTGCGCGAAACCGGGGAAGGCAATATGGCGAAGCGGAGAGAACTCATGG
CTGCTTCGGACTCGTCTATGAATATCGTAGCTAAGGCCTACGGGTCCTCA
TTCAGCCTCCAGGAACAGAGTGTTGCGATTACTATGACAGAAGCCGCCAT
TGTTATGATCGAGAAAACGTATCGGCGATCACCCTTGGAAGTGCCTCGTC
TTGGGATCTGTAAAACAGGCTTGTTTTTGGCAGAGGTGCATGCCACCCAC
GGCCGTTGGCGGAAAGCCATTGGATACGCTATCAGAACGCTGGAGTCGCT
TGGCTACGTGATTGAAGGTTGGCAAGTTCCGTATAAGGAAGGTAGAAAGT
TACATGTCAAGCGGTGGGGACTGGCGATGGATGTTCTTGTTCGCTGCTGG
ATGATCCTTTGCCGCGCGTATGGTGAGGTAGCACCTGAGCTTGCTGACCA
AGCTGAATACTACGCGAGAACAACGTACAGAATATGCATTGGTGAGGATG
AAACATTTGAGGATACTTATAATCGGTCCTCTCACCGAGTCGATGGAATG
ATTGTGCACGGTAGTTGAATGGAGTGCCATGACACCTCACAGATACCCAA
ATACATGGAATTCCTGGAGGAACAAAGACAGATCCTGAAAGATGTCCAGT
CTCGCAAGGGCCAGCCGGCCAAACCGACAAAGTCCCGCGACGAAATAATC
AAGCGGTTCATTCATTACTACTTCGCGGAGACTAGCTCACCTGTAGACAA
GAACGCTATTCGCACCTCATTCGTGCCTCCTGCGTACCCACCCTCCATTG
AGGCGTTGAGTGATTTGAAGAAGGCTCTCATTAAGGATCTCACCATCGAG
ACTCATCATCGTGGCTCTTACACTCTGTTGAGAGCAGTCACTCCAGCATT
CAGAAAGACGGGGATTATGGCCGTGGTAGAAGATGAGGAAGGAGACGTTC
TTACGTTGCAATTGTATAACCAGGATAGGGACCTCGTTACTGATGGGCGG
CTCGTTGATGGGACAATCATGCTCATAAAAGAGCCTTACCTGAAAGTAAT
GGGTGATGGTGATTATGGACTGCGGGTCGACCACCTTTCTGATATCAGGT
TCATCCTGGAGAATGATCCTCTGGTGCCCGCTATCTGGAGGGACGAGTCA
GAAGATCGTGGCTCTGCTAACTCCTGGAGGAAAACTGGGAACAATCTCTA
CGAGCTTAAGGAATACCATCTTGCTCTCAATTGTTATTCCAAAGCTCTAG
ATTGTTCGACGACTCCTAAGGATGAGCTTGCCCTAAGGCTCAACCGTGCT
CAGACATTCCTCAAAACGAATCAGTTCGACGCGGCCCTACGTGATGTCGA
GCACATCCTATCCAAGGACAAGTTCGTCGAGAAAGCATTGTTCCGCAAAG
CCCAGGCCCTTTACTATCTTCAGAGATATCAGCAGTCCTGTGATGTTTAC
GTCGACCTTTGCAAGGCCTATCCAAACAACGCCACTGCTAAAAGCGAGTT
TGCTCGAGCCACAGCACGGCTTTTCGAGCAGCGGACTGGCGAATACCCAT
TTAAACAAATGCAACAAGAGGCAACGAAGCTTAAGCCCCCGCATTTCGAT
CTTGCAACGTATATTGGCCCTGTTGCGGTGAGACCCTCGACCCATGGACG
TGGTTTGTTTACAACACAGGCGGTCCGTGCCGGCGACCTTCTCATATGCG
AAAAGGCCTTTGCGCATGCCTTTCATGACGACGGCGATAATACCAACGTT
TCGATATTGGTGTACGCCGACACAAACAGTATGAAAGTGGGAACCCAGGC
CGAATTGAATAGTCTCATCGCACGAAAGCTGCAAAAGAATCCATCGTTGA
TTCCAGCATTCAATGACCTGTACCACGGCTCATATACACCGGTGGGCGTC
TCTGAGGTCGACGGTTCACCTGTCGTTGATACGGAACCTCACACCGAGGA
GGAACATTTTTATTCCAGTGGAGTCTGGCGTCTCGCATCTTACGTAAATC
ACTCCTGTTACCCGAACACCCACCGTGCATTCATCGGGGACATGATGGTA
GTTCGCGCTACACAGGACCTTCCCGCAAACACGGAGCTCAAATTCTGGTA
CCGAACACCCGTGGATGATGGTACTGCAGAAGACATATACCAGAAATATT
GGGGATTCCAATGTGACTGCGTTATCTGTAAGGATGTGCGCGAAACCGGG
GAAGGCAATATGGCGAAGCGGAGAGAACTCATGGCTGCTTCGGACTCGTC
TATGAATATCGTAGCTAAGGCCTACGGGTCCTCATTCAGCCTCCAGGAAC
AGAGTGTTGCGATTACTATGACAGAAGCCGCCATTGTTATGATCGAGAAA
ACGTATCGGCGATCACCCTTGGAAGTGCCTCGTCTTGGGATCTGTAAAAC
AGGCTTGTTTTTGGCAGAGGTGCATGCCACCCACGGCCGTTGGCGGAAAG
CCATTGGATACGCTATCAGAACGCTGGAGTCGCTTGGCTACGTGATTGAA
GGTTGGCAAGTTCCGTATAAGGAAGGTAGAAAGTTACATGTCAAGCGGTG
GGGACTGGCGATGGATGTTCTTGTTCGCTGCTGGATGATCCTTTGCCGCG
CGTATGGTGAGGTAGCACCTGAGCTTGCTGACCAAGCTGAATACTACGCG
AGAACAACGTACAGAATATGCATTGGTGAGGATGAAACATTTGAGGATAC
TTATAATCGGTCCTCTCACCGAGTCGATGGAATGATTGTGCACGGTAGTT
GA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:0005515protein binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001272CBS51388_001272Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001272-T1.exon1CBS51388_001272-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001272-T1.exon2CBS51388_001272-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001272-T1.exon3CBS51388_001272-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001272-T1.cdsCBS51388_001272-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001272-T1CBS51388_001272-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013026
DBxrefInterPro:IPR011990
DBxrefInterPro:IPR001214
DBxrefInterPro:IPR019734
DBxrefPFAM:PF00856
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:109430..111807 +
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