You are here

CBS51388_001330-T1, CBS51388_001330-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001330-T1
Unique NameCBS51388_001330-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:263538..264642-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001330-T1 ID=CBS51388_001330-T1|Name=CBS51388_001330-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1105bp|location=Sequence derived from alignment at An02:263538..264642- (Aspergillus niger CBS 513.88)
ATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGA CAAAACGCTGGAGTGCGATTGGTATGTCTACGCCGCTGCGCGAAATCAGG GTAACTTTGCTAACCATTCTACAAGTGATATTCATCCATGGGAAATCAAA ATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGA TGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAA TCATTGTCTACAGTATGCCCTGGTAAACCTTGCTATAGAAAACGATTAGC ATTTGTTGACTTGCTCATAGAGGAAAGGTATGACCTCGAAAAGCTCCTCC AGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAA GATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACCCCAGA AACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTC AGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAG TCGGAGATCCAACAAGGCATGTTGCATACAGTGTTCCACATCCGCAAAAG GACAAGTCAGGACTAACTGAGTTCAGCCACAGACCAACCCACAAAGGATG ACAAACGTCTGGACCGTCTAGAGTTTGGAAACACAACATTGTACAAAGTA CGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGTTTCCTC TATTCAGGAATGGACCATCGAGATTAACAAACCCTACCATCGGGCGCTGA GACGTATGTGAGCCTGGATTCTTTGGTTTCCGCATATGTCCGCCTGCTCT GTCTTTTGATGCTGACTATGTTTGCGACGTATGTGAACAGGACGCATTAA GCGTGCCATCAAGGAACACACAACCACCGAGCTCTTGGAAGATGTGGTCC GATGTGGGTTTATCTCACATGGTCAGATGGCCGGCCACGTTCTATCCAAG TACCTCGTGGGTGGTGTTTTGGATGACACTCTGACGAAGTATATCGAGGG ATTGGCGGTGGGAAATGGAGCTGGAAGGGTGCCACTGGCTAACCAGGGGT ACTGA
back to top

Coding sequence (CDS) from alignment at An02:263538..264642-

>CBS51388_001330-T1 ID=CBS51388_001330-T1|Name=CBS51388_001330-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3468bp|location=Sequence derived from alignment at An02:263538..264642- (Aspergillus niger CBS 513.88)
GACGCATTAAGCGTGCCATCAAGGAACACACAACCACCGAGCTCTTGGAA
GATGTGGTCCGATGTGGGTTTATCTCACATGGTCAGATGGCCGGCCACGT
TCTATCCAAGTACCTCGTGGGTGGTGTTTTGGATGACACTCTGACGAAGT
ATATCGAGGGATTGGCGGTGGGAAATGGAGCTGGAAGGGTGCCACTGGCT
AACCAGGGGTACTGATACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAAC
CGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAAACC
CTACCATCGGGCGCTGAGACAGGAAAGGTATGACCTCGAAAAGCTCCTCC
AGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAA
GATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACCCCAGA
AACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTC
AGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAG
TCGGAGATCCAACAAGGCATGTTGCATACAGTGTTCCACATCCGCAAAAG
GACAAATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTC
AAGGACAAAACGCTGGAGTGCGATTGGTATGTCTACGCCGCTGCGCGAAA
TCAGGGTAACTTTGCTAACCATTCTACAAGTGATATTCATCCATGGGAAA
TCAAAATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTTT
GTGGATGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGAA
GGGAATCATTGTCTACAGACGCATTAAGCGTGCCATCAAGGAACACACAA
CCACCGAGCTCTTGGAAGATGTGGTCCGATGTGGGTTTATCTCACATGGT
CAGATGGCCGGCCACGTTCTATCCAAGTACCTCGTGGGTGGTGTTTTGGA
TGACACTCTGACGAAGTATATCGAGGGATTGGCGGTGGGAAATGGAGCTG
GAAGGGTGCCACTGGCTAACCAGGGGTACTGATACGAAGCTTGGGCCACG
AGGTGGGTCTCAAAAACCGATATCCAGTTTCCTCTATTCAGGAATGGACC
ATCGAGATTAACAAACCCTACCATCGGGCGCTGAGACAGGAAAGGTATGA
CCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCG
AGAAGACTTCCAAGGAAGATCTCGAGAATTCTAGCGAAGAATATTCCGAT
ACTTCTGCTACCCCAGAAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAG
CAAGGAGGGAGTGATTCAGACTGAGGTGGTCGAACTCGGTCGCGAGACGC
CGAGCTCGTCTTCTCAGTCGGAGATCCAACAAGGCATGTTGCATACAGTG
TTCCACATCCGCAAAAGGACAAATGGCTTCCTATCACCGAGTTCTTGGAG
TTTTCGGCAAGTCCGTCAAGGACAAAACGCTGGAGTGCGATTGGTATGTC
TACGCCGCTGCGCGAAATCAGGGTAACTTTGCTAACCATTCTACAAGTGA
TATTCATCCATGGGAAATCAAAATCAACGGTGAACAATGGCCAGGAAAGA
TCCGCCTAATCGGGTTTGTGGATGTGTTCTTCCTTTTCTCTTACTCGGCC
AACGCACGTTTCGAGAAGGGAATCATTGTCTACAGACGCATTAAGCGTGC
CATCAAGGAACACACAACCACCGAGCTCTTGGAAGATGTGGTCCGATGTG
GGTTTATCTCACATGGTCAGATGGCCGGCCACGTTCTATCCAAGTACCTC
GTGGGTGGTGTTTTGGATGACACTCTGACGAAGTATATCGAGGGATTGGC
GGTGGGAAATGGAGCTGGAAGGGTGCCACTGGCTAACCAGGGGTACTGAT
ACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAACCGATATCCAGTTTCCT
CTATTCAGGAATGGACCATCGAGATTAACAAACCCTACCATCGGGCGCTG
AGACAGGAAAGGTATGACCTCGAAAAGCTCCTCCAGCAAAGCGATGAAGC
TCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGAAGATCTCGAGAATTCTA
GCGAAGAATATTCCGATACTTCTGCTACCCCAGAAACTCTCTTGTCAAGG
CTTCCGTGCCATGAAAGCAAGGAGGGAGTGATTCAGACTGAGGTGGTCGA
ACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCAGTCGGAGATCCAACAAG
GCATGTTGCATACAGTGTTCCACATCCGCAAAAGGACAAATGGCTTCCTA
TCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGTCAAGGACAAAACGCTGG
AGTGCGATTGGTATGTCTACGCCGCTGCGCGAAATCAGGGTAACTTTGCT
AACCATTCTACAAGTGATATTCATCCATGGGAAATCAAAATCAACGGTGA
ACAATGGCCAGGAAAGATCCGCCTAATCGGGTTTGTGGATGTGTTCTTCC
TTTTCTCTTACTCGGCCAACGCACGTTTCGAGAAGGGAATCATTGTCTAC
AGACGCATTAAGCGTGCCATCAAGGAACACACAACCACCGAGCTCTTGGA
AGATGTGGTCCGATGTGGGTTTATCTCACATGGTCAGATGGCCGGCCACG
TTCTATCCAAGTACCTCGTGGGTGGTGTTTTGGATGACACTCTGACGAAG
TATATCGAGGGATTGGCGGTGGGAAATGGAGCTGGAAGGGTGCCACTGGC
TAACCAGGGGTACTGATACGAAGCTTGGGCCACGAGGTGGGTCTCAAAAA
CCGATATCCAGTTTCCTCTATTCAGGAATGGACCATCGAGATTAACAAAC
CCTACCATCGGGCGCTGAGACAGGAAAGGTATGACCTCGAAAAGCTCCTC
CAGCAAAGCGATGAAGCTCGTGCGGAAGCTGGCGAGAAGACTTCCAAGGA
AGATCTCGAGAATTCTAGCGAAGAATATTCCGATACTTCTGCTACCCCAG
AAACTCTCTTGTCAAGGCTTCCGTGCCATGAAAGCAAGGAGGGAGTGATT
CAGACTGAGGTGGTCGAACTCGGTCGCGAGACGCCGAGCTCGTCTTCTCA
GTCGGAGATCCAACAAGGCATGTTGCATACAGTGTTCCACATCCGCAAAA
GGACAAATGGCTTCCTATCACCGAGTTCTTGGAGTTTTCGGCAAGTCCGT
CAAGGACAAAACGCTGGAGTGCGATTGGTATGTCTACGCCGCTGCGCGAA
ATCAGGGTAACTTTGCTAACCATTCTACAAGTGATATTCATCCATGGGAA
ATCAAAATCAACGGTGAACAATGGCCAGGAAAGATCCGCCTAATCGGGTT
TGTGGATGTGTTCTTCCTTTTCTCTTACTCGGCCAACGCACGTTTCGAGA
AGGGAATCATTGTCTACA
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001330CBS51388_001330Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001330-T1CBS51388_001330-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001330-T1.cdsCBS51388_001330-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001330-T1.exon4CBS51388_001330-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001330-T1.exon3CBS51388_001330-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001330-T1.exon2CBS51388_001330-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001330-T1.exon1CBS51388_001330-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:263538..264642 -