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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:497581..498284+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001405-T1 ID=CBS51388_001405-T1|Name=CBS51388_001405-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=704bp|location=Sequence derived from alignment at An02:497581..498284+ (Aspergillus niger CBS 513.88)
ATGCTTCTCGACGAGAATCCCGCTGGTGTATGTTACTTTTGCCCCTTCAT
CATGCCCCACTGCTGACTCTCCAGCTCATCAACCACACCATCGGCAACTT
CAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCGCTCG
CCGCACTACAACAATCGCGCGAATTGCGTACACGCGAAGCCGAATCGGCC
CTGCGCAAGCTCTCGCGGCACCTGTCCGCGCTGACGGCCCAGCATGAGGA
GGCCGTGACGGCGCATACTCTGGCAAGCACGCGGCGGAGATGGTCGAGCT
GGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTGGAGATTG
AAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACTGGCC
GATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCGAGCG
CGAGATGGATGATGCGACGCTGTGAGTACTTCTCATTTGTTTGACTTGTA
GTACCCGGAGGCTGACTATTTGGTAGGCTGCGATTGAAAATCTACCGGTC
CTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCGG
TGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCCG
AAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGGG
GTAG back to topCoding sequence (CDS) from alignment at An02:497581..498284+ >CBS51388_001405-T1 ID=CBS51388_001405-T1|Name=CBS51388_001405-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2124bp|location=Sequence derived from alignment at An02:497581..498284+ (Aspergillus niger CBS 513.88)
ATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGGCAA
CTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCGC
TCGCCGCACTACAACAATCGCGCGAATTGCGAGGCCGTGACGGCGCATAC
TCTGGCAAGCACGCGGCGGAGATGGTCGAGCTGGACACGAAGAAATTCCG
GATTGCCAAGTCGGCTACCGAGCTGGAGATTGAAAGCGAGCGCTTAGAAG
GCGAGCTGGAGATGCTGAAGGAGCGACTGGCCGATCTGGAGGCGCAGGGG
TTGGAGGGCGATGAACCGACGCGCCGCGAGCGCGAGATGGATGATGCGAC
GCTGCTGCGATTGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGGCGG
ACGATGCAGGCAACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAGGGC
GATGTGCATGTGGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTATTC
GAACTACTTCTGGTCGACGATGCAGGGGTAGATGCTTCTCGACGAGAATC
CCGCTGGTCTCATCAACCACACCATCGGCAACTTCAACATCCACCCCGAT
AAACAAGCCGTCACTCGCATCAATGACTCGCTCGCCGCACTACAACAATC
GCGCGAATTGCGAGGCCGTGACGGCGCATACTCTGGCAAGCACGCGGCGG
AGATGGTCGAGCTGGACACGAAGAAATTCCGGATTGCCAAGTCGGCTACC
GAGCTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCTGGAGATGCTGAA
GGAGCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGGGCGATGAACCGA
CGCGCCGCGAGCGCGAGATGGATGATGCGACGCTGCTGCGATTGAAAATC
TACCGGTCCTTGGGCGTGGATATCGAGGCGGACGATGCAGGCAACTTCAC
CAAGGCGGTGATCCGCAATAGTCGCAAGGGCGATGTGCATGTGGTGAACA
TTGACCCGAAGTTCTCGCGGTTCTTCTATTCGAACTACTTCTGGTCGACG
ATGCAGGGGTAGATGCTTCTCGACGAGAATCCCGCTGGTCTCATCAACCA
CACCATCGGCAACTTCAACATCCACCCCGATAAACAAGCCGTCACTCGCA
TCAATGACTCGCTCGCCGCACTACAACAATCGCGCGAATTGCGAGGCCGT
GACGGCGCATACTCTGGCAAGCACGCGGCGGAGATGGTCGAGCTGGACAC
GAAGAAATTCCGGATTGCCAAGTCGGCTACCGAGCTGGAGATTGAAAGCG
AGCGCTTAGAAGGCGAGCTGGAGATGCTGAAGGAGCGACTGGCCGATCTG
GAGGCGCAGGGGTTGGAGGGCGATGAACCGACGCGCCGCGAGCGCGAGAT
GGATGATGCGACGCTGCTGCGATTGAAAATCTACCGGTCCTTGGGCGTGG
ATATCGAGGCGGACGATGCAGGCAACTTCACCAAGGCGGTGATCCGCAAT
AGTCGCAAGGGCGATGTGCATGTGGTGAACATTGACCCGAAGTTCTCGCG
GTTCTTCTATTCGAACTACTTCTGGTCGACGATGCAGGGGTAGATGCTTC
TCGACGAGAATCCCGCTGGTCTCATCAACCACACCATCGGCAACTTCAAC
ATCCACCCCGATAAACAAGCCGTCACTCGCATCAATGACTCGCTCGCCGC
ACTACAACAATCGCGCGAATTGCGAGGCCGTGACGGCGCATACTCTGGCA
AGCACGCGGCGGAGATGGTCGAGCTGGACACGAAGAAATTCCGGATTGCC
AAGTCGGCTACCGAGCTGGAGATTGAAAGCGAGCGCTTAGAAGGCGAGCT
GGAGATGCTGAAGGAGCGACTGGCCGATCTGGAGGCGCAGGGGTTGGAGG
GCGATGAACCGACGCGCCGCGAGCGCGAGATGGATGATGCGACGCTGCTG
CGATTGAAAATCTACCGGTCCTTGGGCGTGGATATCGAGGCGGACGATGC
AGGCAACTTCACCAAGGCGGTGATCCGCAATAGTCGCAAGGGCGATGTGC
ATGTGGTGAACATTGACCCGAAGTTCTCGCGGTTCTTCTATTCGAACTAC
TTCTGGTCGACGATGCAGGGGTAG back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR013252 |
| DBxref | InterPro:IPR038066 |
| DBxref | PFAM:PF08286 |
| Product | kinetochore-associated Ndc80 complex subunit spc24 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:497581..498284 + |
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