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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:499630..500293+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001407-T1 ID=CBS51388_001407-T1|Name=CBS51388_001407-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=664bp|location=Sequence derived from alignment at An02:499630..500293+ (Aspergillus niger CBS 513.88)
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGGTACATCC
CCCATCCCATTACCCTCACCCCCAACACCACCACCACCCACACCCAACTA
ATTCCAAAACCACAGCTCGCAACCCAATTCTACGCGACTCTATGCTACCT
AACGACCTACCACGACAACATCCCCGCGACGCCGCCTCCCACAAGCACAA
CCCCCAGCGCCGCGCCCCTACTAGCAAAAATCCCCAAGAACGCATCTACC
CCCCCGGTCCCAGCGTCCGCGCCCCAAGCAGCACAATCCCAATCGCAAGC
CTCGCCACCACCACCCGACACCGCAAATCCCCAAACCGGAGGGCAGCATG
CAGATCAACAGCAACAAAGCCCAGATGGTGAAGGTCTACCTGCGCCGGAC
AGCCCCGCTACATTTGCAGCCAGACAACGGGAACTAGCGCGCGATCTCGT
CATCAAGGAGCAGCAGATCGAGTACTTGATTAGTGTGTTGCCGGGGATAG
ATAGTAGTGAGGCGGAGCAGGAGAGGCGGATCCGGGAGCTGGAGGGGGAG
TTGAGGATTGTGGAGGGGGTGAGGGAGGAGAGGAGACGCGAGTTGGGGGT
GTTGAGGAGGAGGTTGGAGGGTGTTTTGGGGGTGGTGGAGAGGGGGATTT
ATTCTAGGGATTAG back to topCoding sequence (CDS) from alignment at An02:499630..500293+ >CBS51388_001407-T1 ID=CBS51388_001407-T1|Name=CBS51388_001407-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1182bp|location=Sequence derived from alignment at An02:499630..500293+ (Aspergillus niger CBS 513.88)
ATGGCAGACATCTTAACCCAACTTCAAACCTGCCTCGACCAGCTCGCAAC
CCAATTCTACGCGACTCTATGCTACCTAACGACCTACCACGACAACATCC
CCGCGACGCCGCCTCCCACAAGCACAACCCCCAGCGCCGCGCCCCTACTA
GCAAAAATCCCCAAGAACGCATCTACCCCCCCGGTCCCAGCGTCCGCGCC
CCAAGCAGCACAATCCCAATCGCAAGCCTCGCCACCACCACCCGACACCG
CAAATCCCCAAACCGGAGGGCAGCATGCAGATCAACAGCAACAAAGCCCA
GATGGTGAAGGTCTACCTGCGCCGGACAGCCCCGCTACATTTGCAGCCAG
ACAACGGGAACTAGCGCGCGATCTCGTCATCAAGGAGCAGCAGATCGAGT
ACTTGATTAGTGTGTTGCCGGGGATAGATAGTAGTGAGGCGGAGCAGGAG
AGGCGGATCCGGGAGCTGGAGGGGGAGTTGAGGATTGTGGAGGGGGTGAG
GGAGGAGAGGAGACGCGAGTTGGGGGTGTTGAGGAGGAGGTTGGAGGGTG
TTTTGGGGGTGGTGGAGAGGGGGATTTATTCTAGGGATTAGATGGCAGAC
ATCTTAACCCAACTTCAAACCTGCCTCGACCAGCTCGCAACCCAATTCTA
CGCGACTCTATGCTACCTAACGACCTACCACGACAACATCCCCGCGACGC
CGCCTCCCACAAGCACAACCCCCAGCGCCGCGCCCCTACTAGCAAAAATC
CCCAAGAACGCATCTACCCCCCCGGTCCCAGCGTCCGCGCCCCAAGCAGC
ACAATCCCAATCGCAAGCCTCGCCACCACCACCCGACACCGCAAATCCCC
AAACCGGAGGGCAGCATGCAGATCAACAGCAACAAAGCCCAGATGGTGAA
GGTCTACCTGCGCCGGACAGCCCCGCTACATTTGCAGCCAGACAACGGGA
ACTAGCGCGCGATCTCGTCATCAAGGAGCAGCAGATCGAGTACTTGATTA
GTGTGTTGCCGGGGATAGATAGTAGTGAGGCGGAGCAGGAGAGGCGGATC
CGGGAGCTGGAGGGGGAGTTGAGGATTGTGGAGGGGGTGAGGGAGGAGAG
GAGACGCGAGTTGGGGGTGTTGAGGAGGAGGTTGGAGGGTGTTTTGGGGG
TGGTGGAGAGGGGGATTTATTCTAGGGATTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016592 | mediator complex |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265SHM |
| DBxref | InterPro:IPR037212 |
| DBxref | InterPro:IPR021384 |
| DBxref | PFAM:PF11221 |
| Product | RNA polymerase II mediator complex subunit |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:499630..500293 + |
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