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CBS51388_001410-T1, CBS51388_001410-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001410-T1
Unique NameCBS51388_001410-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:510622..511667+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001410-T1 ID=CBS51388_001410-T1|Name=CBS51388_001410-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1046bp|location=Sequence derived from alignment at An02:510622..511667+ (Aspergillus niger CBS 513.88)
ATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTGTG
CCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTCG
GCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAGG
CCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGGT
CAAGACTGCTGGTCAGGGCCCCAAGCGTAAGGTGAGTCTGTCGTCTAGAA
AATTTTTCCCTGGCTGTCCTATGTCTTTGTACACCTGAGATAACGATCGC
TAACATTCCTATCAATGTCTTATCAGTCCGGCGGTGCTATCGATACGAAT
GGCTTGTCTACCTCGAGGTCCGAAGCAGGGACGCCGCCCATGGGGTCCCA
AGGATACCGTCGCGCGTCGCGAAAGGCATCACCGGGCCATTCCGACCGAT
CCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCCATGCAA
CAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCAGCACAT
GTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGAATGCGC
TGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCGGCGGCT
GTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCTCGCAGC
CAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCAATGAAC
TGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACTGCGCGC
CGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCGGTCTCT
GGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATATCTGAGC
TGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCGGGCAAT
GACAGTCCCGGTGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGACGTCGT
GGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCTAA
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Coding sequence (CDS) from alignment at An02:510622..511667+

>CBS51388_001410-T1 ID=CBS51388_001410-T1|Name=CBS51388_001410-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1902bp|location=Sequence derived from alignment at An02:510622..511667+ (Aspergillus niger CBS 513.88)
ATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTGTG
CCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTCG
GCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAGG
CCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGGT
CAAGACTGCTGGTCAGGGCCCCAAGCGTAAGTCCGGCGGTGCTATCGATA
CGAATGGCTTGTCTACCTCGAGGTCCGAAGCAGGGACGCCGCCCATGGGG
TCCCAAGGATACCGTCGCGCGTCGCGAAAGGCATCACCGGGCCATTCCGA
CCGATCCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCCA
TGCAACAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCAG
CACATGTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGAA
TGCGCTGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCGG
CGGCTGTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCTC
GCAGCCAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCAA
TGAACTGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACTG
CGCGCCGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCGG
TCTCTGGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATATC
TGAGCTGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCGG
GCAATGACAGTCCCGGTGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGAC
GTCGTGGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCTA
AATGGCGACCACGTTGGCTGATCACAAACGTCCTCAATTACAGCCCGTGT
GCCAGAATTGCGGCACTTCTACGACACCTCTCTGGCGCAGGGACGAACTC
GGCTCCGTCCTTTGCAACGCCTGTGGCTTGTTCCTCAAACTACATGGCAG
GCCCCGTCCGATAAGCTTAAAGACCGATGTCATCAAAAGTCGCAACCGGG
TCAAGACTGCTGGTCAGGGCCCCAAGCGTAAGTCCGGCGGTGCTATCGAT
ACGAATGGCTTGTCTACCTCGAGGTCCGAAGCAGGGACGCCGCCCATGGG
GTCCCAAGGATACCGTCGCGCGTCGCGAAAGGCATCACCGGGCCATTCCG
ACCGATCCAACTCACCCGTCTCCCGTACCGAAACGCCTGGTATCCCTTCC
ATGCAACAACCACACCCTCAGTCGCAACACAATGCCAACATTGCGCCTCA
GCACATGTTCGATAGCGTCACAATCGGCGACCATGGGCTCAATCAGCCGA
ATGCGCTGCCCTCGGTGCAGCCACGCCAGCCGTCGCCCACGGCGACCTCG
GCGGCTGTCGACCGCCATCTCGAGTCACCACAGACATACGATGGACTGCT
CGCAGCCAATACCTCGTTGAAGACTCGCGTGAGCGAATTGGAGTTTATCA
ATGAACTGTTCCGGGGCCGGGTGACGGAACTGGAGCAGAGCGGCGCGACT
GCGCGCCGATCGGAGATGATCGTCCGGGACTCGGAGGTACGGCTCCGGCG
GTCTCTGGAGGAGGCCCAACGGCGCGAAGACGATCTGAAACGGAGGATAT
CTGAGCTGGAGCGACAGCTTACCGACCAAACCTCCTCTGCCAACCCGGCG
GGCAATGACAGTCCCGGTGAGCCGCTGGCCAAGCGGATGCGGCTGTCCGA
CGTCGTGGAGCAACCTGCGGAGTCGCCAACAAAATCCCCCAAGAGTGTCT
AA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006355regulation of transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0043565sequence-specific DNA binding
GO:0008270zinc ion binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001410CBS51388_001410Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001410-T1.exon1CBS51388_001410-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001410-T1.exon2CBS51388_001410-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001410-T1.cdsCBS51388_001410-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001410-T1CBS51388_001410-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR013088
DBxrefInterPro:IPR000679
DBxrefPFAM:PF00320
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:510622..511667 +
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