You are here

Home

CBS51388_001415-T1, CBS51388_001415-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001415-T1
Unique NameCBS51388_001415-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:524495..526328+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001415-T1 ID=CBS51388_001415-T1|Name=CBS51388_001415-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1834bp|location=Sequence derived from alignment at An02:524495..526328+ (Aspergillus niger CBS 513.88)
ATGCGGACACTCTCCTTTCCACTTCGCGTGCGCGCCTCAATTCTGCACAC
CAGCCGGAGGGCAGGTCAGCCGCTGCGAGCCCTGAGTCTATGGCATCCTC
CCAAGTTCGAGAATGAGAAGCCAGTAAGTGTTAAGTTTAAACGCATCACA
GCTCCTGTCATGCTTCGATGCTAAAATGACCACTAACAACTGCAGCTTGA
CTACGCAAAAGGCTCACCTGAGAGGGCCGAGTTGACGCAAGCCCTACAGA
AATTGAAGAGCGAGATGCCCTTCAATATCCCACTCACCATCAATGGCTCC
ACAGTGAGTCACCTCACTTCTAAATAAGCCCACGCAGCTAACAATCCAGA
CACAAACCATCAAATCCCAAGTCCAACAGAACCCCTCACGCCACAACGAG
GTCGTTGCCGAATATGCATCCGCAACGCCCGAGCAGGTCAACACCGCCGT
GGACGCAGCCCTCAAGGCCAAACCAGCCTGGGAGGCCATGCCCTTCGAGG
ACCGCGCCGCCATCTTCCTGCGCGCCTCTGAGCTCATTGCAGGCAGATAT
CGCTCTGAAATCGTCGCTGCTACCATGTTAGGCCAGGGAAAGAACATTTG
GCAAGCCGAGATCGATGCCGCCGCCGAGACAGTGGACTTCTTCCGCCACT
ACATCCAAGAGTGCTGGTCACTCTTCGCGCAGCAGCCCAAAGTCCACCTG
CCCGGCACCTGGAACAAGCTCGAATACCGACCTTTGGAAGGATTTGTCTA
CGCCATCGCCCCATTCAACTTCACCGCACTAGGCGCGACCCTCATCGGCC
CAGCCGCCCTCCTAGGCAACGTCGTTATCTGGAAACCGTCCGACTCTGCC
CTCCACGCCAGCTGGCTCCTGCACCAGATTCTCCTCGAAGCCGGTCTCCC
CAAGGACGTAATCCAGTTCCTCCCCGGCGACGCCGAACAAGTAACCAACA
CGATCCTCCACCGCCCCGAATTCGGCGCCCTCACCTTCATCGGCTCCACG
CAAGTCTTCAAAGGCCTGCAGAAGAAGATCGGCAATGCCATCGGCGAGGG
AATTTACAACTCCTACCCACGTGTGATCGGTGAAACTGGTGGCAAGAACT
GGGGTCTCGTGCACCCCTCAGCGGACATCACCAACGCAGCCCTGAACACC
ATTCGTGGCGCGTTCGAATACCAGGGCCAGAAATGCTCCGCCAATTCCCG
CATCTACGTCGCAGAATCCGTCTGGCCTGCTTTCCAGCAAACGTTAAAGG
ACCACCTCTCCCGCCTGTCTGTCGGCCCGGTCGACGAATACGCCCACTTC
ATTAACCCCGTCATCCACGAACGCGCCTTCGACCGTCTTGCGGAGGTCAT
TCACGCCGCGCGCACCGATCCCGAACTCGAACTCGTTGCTGGCGGCATCG
CCGACAAGAGTCAGGGATACTACGTACACCCGACTGTTTACCGCACAACG
AACCCGAAGCATGAGATCATGTCCCGGGAACTATTCGGCCCCATTCTAGG
CGTATACGTGTACCCAGACAATGAGTGGGAGGAAACGCTGAAGCTAGTGG
ACGGGACATCGCGCTACGCCTTGACGGGGAGTATCTATGCGAAGGACCCA
TACGCGTCGCGACAGGCGCAGACAGCGCTGCGTCATGCGGCGGGCATGCT
GTATCTGAATACGAAGTGTACGGGTTCGACGGTCGCGCAGCAGCCGTTTG
GAGGAAGTCGAGATTCCGGAACGAATGACAAGACGGGCACAATGGCGCAT
TTGCAGCGGTTCGTGAGTGTCAGGACGATTAAAGAGGAGTTTGGGAGCTT
GGAGGAGGTGGAGTATCCTTCTAATGTTGTGTGA
back to top

Coding sequence (CDS) from alignment at An02:524495..526328+

>CBS51388_001415-T1 ID=CBS51388_001415-T1|Name=CBS51388_001415-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=5148bp|location=Sequence derived from alignment at An02:524495..526328+ (Aspergillus niger CBS 513.88)
ATGCGGACACTCTCCTTTCCACTTCGCGTGCGCGCCTCAATTCTGCACAC
CAGCCGGAGGGCAGGTCAGCCGCTGCGAGCCCTGAGTCTATGGCATCCTC
CCAAGTTCGAGAATGAGAAGCCACTTGACTACGCAAAAGGCTCACCTGAG
AGGGCCGAGTTGACGCAAGCCCTACAGAAATTGAAGAGCGAGATGCCCTT
CAATATCCCACTCACCATCAATGGCTCCACAACACAAACCATCAAATCCC
AAGTCCAACAGAACCCCTCACGCCACAACGAGGTCGTTGCCGAATATGCA
TCCGCAACGCCCGAGCAGGTCAACACCGCCGTGGACGCAGCCCTCAAGGC
CAAACCAGCCTGGGAGGCCATGCCCTTCGAGGACCGCGCCGCCATCTTCC
TGCGCGCCTCTGAGCTCATTGCAGGCAGATATCGCTCTGAAATCGTCGCT
GCTACCATGTTAGGCCAGGGAAAGAACATTTGGCAAGCCGAGATCGATGC
CGCCGCCGAGACAGTGGACTTCTTCCGCCACTACATCCAAGAGTGCTGGT
CACTCTTCGCGCAGCAGCCCAAAGTCCACCTGCCCGGCACCTGGAACAAG
CTCGAATACCGACCTTTGGAAGGATTTGTCTACGCCATCGCCCCATTCAA
CTTCACCGCACTAGGCGCGACCCTCATCGGCCCAGCCGCCCTCCTAGGCA
ACGTCGTTATCTGGAAACCGTCCGACTCTGCCCTCCACGCCAGCTGGCTC
CTGCACCAGATTCTCCTCGAAGCCGGTCTCCCCAAGGACGTAATCCAGTT
CCTCCCCGGCGACGCCGAACAAGTAACCAACACGATCCTCCACCGCCCCG
AATTCGGCGCCCTCACCTTCATCGGCTCCACGCAAGTCTTCAAAGGCCTG
CAGAAGAAGATCGGCAATGCCATCGGCGAGGGAATTTACAACTCCTACCC
ACGTGTGATCGGTGAAACTGGTGGCAAGAACTGGGGTCTCGTGCACCCCT
CAGCGGACATCACCAACGCAGCCCTGAACACCATTCGTGGCGCGTTCGAA
TACCAGGGCCAGAAATGCTCCGCCAATTCCCGCATCTACGTCGCAGAATC
CGTCTGGCCTGCTTTCCAGCAAACGTTAAAGGACCACCTCTCCCGCCTGT
CTGTCGGCCCGGTCGACGAATACGCCCACTTCATTAACCCCGTCATCCAC
GAACGCGCCTTCGACCGTCTTGCGGAGGTCATTCACGCCGCGCGCACCGA
TCCCGAACTCGAACTCGTTGCTGGCGGCATCGCCGACAAGAGTCAGGGAT
ACTACGTACACCCGACTGTTTACCGCACAACGAACCCGAAGCATGAGATC
ATGTCCCGGGAACTATTCGGCCCCATTCTAGGCGTATACGTGTACCCAGA
CAATGAGTGGGAGGAAACGCTGAAGCTAGTGGACGGGACATCGCGCTACG
CCTTGACGGGGAGTATCTATGCGAAGGACCCATACGCGTCGCGACAGGCG
CAGACAGCGCTGCGTCATGCGGCGGGCATGCTGTATCTGAATACGAAGTG
TACGGGTTCGACGGTCGCGCAGCAGCCGTTTGGAGGAAGTCGAGATTCCG
GAACGAATGACAAGACGGGCACAATGGCGCATTTGCAGCGGTTCGTGAGT
GTCAGGACGATTAAAGAGGAGTTTGGGAGCTTGGAGGAGGTGGAGTATCC
TTCTAATGTTGTGTGAATGCGGACACTCTCCTTTCCACTTCGCGTGCGCG
CCTCAATTCTGCACACCAGCCGGAGGGCAGGTCAGCCGCTGCGAGCCCTG
AGTCTATGGCATCCTCCCAAGTTCGAGAATGAGAAGCCACTTGACTACGC
AAAAGGCTCACCTGAGAGGGCCGAGTTGACGCAAGCCCTACAGAAATTGA
AGAGCGAGATGCCCTTCAATATCCCACTCACCATCAATGGCTCCACAACA
CAAACCATCAAATCCCAAGTCCAACAGAACCCCTCACGCCACAACGAGGT
CGTTGCCGAATATGCATCCGCAACGCCCGAGCAGGTCAACACCGCCGTGG
ACGCAGCCCTCAAGGCCAAACCAGCCTGGGAGGCCATGCCCTTCGAGGAC
CGCGCCGCCATCTTCCTGCGCGCCTCTGAGCTCATTGCAGGCAGATATCG
CTCTGAAATCGTCGCTGCTACCATGTTAGGCCAGGGAAAGAACATTTGGC
AAGCCGAGATCGATGCCGCCGCCGAGACAGTGGACTTCTTCCGCCACTAC
ATCCAAGAGTGCTGGTCACTCTTCGCGCAGCAGCCCAAAGTCCACCTGCC
CGGCACCTGGAACAAGCTCGAATACCGACCTTTGGAAGGATTTGTCTACG
CCATCGCCCCATTCAACTTCACCGCACTAGGCGCGACCCTCATCGGCCCA
GCCGCCCTCCTAGGCAACGTCGTTATCTGGAAACCGTCCGACTCTGCCCT
CCACGCCAGCTGGCTCCTGCACCAGATTCTCCTCGAAGCCGGTCTCCCCA
AGGACGTAATCCAGTTCCTCCCCGGCGACGCCGAACAAGTAACCAACACG
ATCCTCCACCGCCCCGAATTCGGCGCCCTCACCTTCATCGGCTCCACGCA
AGTCTTCAAAGGCCTGCAGAAGAAGATCGGCAATGCCATCGGCGAGGGAA
TTTACAACTCCTACCCACGTGTGATCGGTGAAACTGGTGGCAAGAACTGG
GGTCTCGTGCACCCCTCAGCGGACATCACCAACGCAGCCCTGAACACCAT
TCGTGGCGCGTTCGAATACCAGGGCCAGAAATGCTCCGCCAATTCCCGCA
TCTACGTCGCAGAATCCGTCTGGCCTGCTTTCCAGCAAACGTTAAAGGAC
CACCTCTCCCGCCTGTCTGTCGGCCCGGTCGACGAATACGCCCACTTCAT
TAACCCCGTCATCCACGAACGCGCCTTCGACCGTCTTGCGGAGGTCATTC
ACGCCGCGCGCACCGATCCCGAACTCGAACTCGTTGCTGGCGGCATCGCC
GACAAGAGTCAGGGATACTACGTACACCCGACTGTTTACCGCACAACGAA
CCCGAAGCATGAGATCATGTCCCGGGAACTATTCGGCCCCATTCTAGGCG
TATACGTGTACCCAGACAATGAGTGGGAGGAAACGCTGAAGCTAGTGGAC
GGGACATCGCGCTACGCCTTGACGGGGAGTATCTATGCGAAGGACCCATA
CGCGTCGCGACAGGCGCAGACAGCGCTGCGTCATGCGGCGGGCATGCTGT
ATCTGAATACGAAGTGTACGGGTTCGACGGTCGCGCAGCAGCCGTTTGGA
GGAAGTCGAGATTCCGGAACGAATGACAAGACGGGCACAATGGCGCATTT
GCAGCGGTTCGTGAGTGTCAGGACGATTAAAGAGGAGTTTGGGAGCTTGG
AGGAGGTGGAGTATCCTTCTAATGTTGTGTGAATGCGGACACTCTCCTTT
CCACTTCGCGTGCGCGCCTCAATTCTGCACACCAGCCGGAGGGCAGGTCA
GCCGCTGCGAGCCCTGAGTCTATGGCATCCTCCCAAGTTCGAGAATGAGA
AGCCACTTGACTACGCAAAAGGCTCACCTGAGAGGGCCGAGTTGACGCAA
GCCCTACAGAAATTGAAGAGCGAGATGCCCTTCAATATCCCACTCACCAT
CAATGGCTCCACAACACAAACCATCAAATCCCAAGTCCAACAGAACCCCT
CACGCCACAACGAGGTCGTTGCCGAATATGCATCCGCAACGCCCGAGCAG
GTCAACACCGCCGTGGACGCAGCCCTCAAGGCCAAACCAGCCTGGGAGGC
CATGCCCTTCGAGGACCGCGCCGCCATCTTCCTGCGCGCCTCTGAGCTCA
TTGCAGGCAGATATCGCTCTGAAATCGTCGCTGCTACCATGTTAGGCCAG
GGAAAGAACATTTGGCAAGCCGAGATCGATGCCGCCGCCGAGACAGTGGA
CTTCTTCCGCCACTACATCCAAGAGTGCTGGTCACTCTTCGCGCAGCAGC
CCAAAGTCCACCTGCCCGGCACCTGGAACAAGCTCGAATACCGACCTTTG
GAAGGATTTGTCTACGCCATCGCCCCATTCAACTTCACCGCACTAGGCGC
GACCCTCATCGGCCCAGCCGCCCTCCTAGGCAACGTCGTTATCTGGAAAC
CGTCCGACTCTGCCCTCCACGCCAGCTGGCTCCTGCACCAGATTCTCCTC
GAAGCCGGTCTCCCCAAGGACGTAATCCAGTTCCTCCCCGGCGACGCCGA
ACAAGTAACCAACACGATCCTCCACCGCCCCGAATTCGGCGCCCTCACCT
TCATCGGCTCCACGCAAGTCTTCAAAGGCCTGCAGAAGAAGATCGGCAAT
GCCATCGGCGAGGGAATTTACAACTCCTACCCACGTGTGATCGGTGAAAC
TGGTGGCAAGAACTGGGGTCTCGTGCACCCCTCAGCGGACATCACCAACG
CAGCCCTGAACACCATTCGTGGCGCGTTCGAATACCAGGGCCAGAAATGC
TCCGCCAATTCCCGCATCTACGTCGCAGAATCCGTCTGGCCTGCTTTCCA
GCAAACGTTAAAGGACCACCTCTCCCGCCTGTCTGTCGGCCCGGTCGACG
AATACGCCCACTTCATTAACCCCGTCATCCACGAACGCGCCTTCGACCGT
CTTGCGGAGGTCATTCACGCCGCGCGCACCGATCCCGAACTCGAACTCGT
TGCTGGCGGCATCGCCGACAAGAGTCAGGGATACTACGTACACCCGACTG
TTTACCGCACAACGAACCCGAAGCATGAGATCATGTCCCGGGAACTATTC
GGCCCCATTCTAGGCGTATACGTGTACCCAGACAATGAGTGGGAGGAAAC
GCTGAAGCTAGTGGACGGGACATCGCGCTACGCCTTGACGGGGAGTATCT
ATGCGAAGGACCCATACGCGTCGCGACAGGCGCAGACAGCGCTGCGTCAT
GCGGCGGGCATGCTGTATCTGAATACGAAGTGTACGGGTTCGACGGTCGC
GCAGCAGCCGTTTGGAGGAAGTCGAGATTCCGGAACGAATGACAAGACGG
GCACAATGGCGCATTTGCAGCGGTTCGTGAGTGTCAGGACGATTAAAGAG
GAGTTTGGGAGCTTGGAGGAGGTGGAGTATCCTTCTAATGTTGTGTGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
TermDefinition
GO:00038421-pyrroline-5-carboxylate dehydrogenase activity
GO:0016620oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor
GO:0016491oxidoreductase activity
Vocabulary: Biological Process
TermDefinition
GO:0010133proline catabolic process to glutamate
GO:0055114oxidation-reduction process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001415CBS51388_001415Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001415-T1.exon1CBS51388_001415-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001415-T1.exon2CBS51388_001415-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001415-T1.exon3CBS51388_001415-T1.exon3Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001415-T1.cdsCBS51388_001415-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001415-T1CBS51388_001415-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR016161
DBxrefInterPro:IPR016160
DBxrefInterPro:IPR016162
DBxrefInterPro:IPR015590
DBxrefInterPro:IPR005931
DBxrefInterPro:IPR016163
DBxrefPFAM:PF00171
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:524495..526328 +
Powered by Drupal