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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:530246..531095- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001417-T1 ID=CBS51388_001417-T1|Name=CBS51388_001417-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=850bp|location=Sequence derived from alignment at An02:530246..531095- (Aspergillus niger CBS 513.88)
ATGCCACAGAGAGTCCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAA
GCGGCGCCATGTCAAGGTATTAGCTTACGCTCCGGTTATCCCTACGAACC
GACTAACCTCTCCAGTGCGATGAGAGACATCCCATTTGCTCGAATTGCCA
TAGCGCCGAGCGAGTCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAG
CAGCTCCACGGCCAGTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATA
CCTCTCGGGAGTACACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGC
GCCCTTCCGCAGCCAGGCCGTGAACATACTCCATATCGAGCTCTTCCACA
ATTTGTACACCAAGATCTGCACCAGCTTCGACCCCAACAGATCTATATCA
TGGCTAGCAGATGGTGTGGACCCTACTACAGCCCCATATCTAGTCAACGA
GCTGCTCGCATTTAGTGCCCTACACCTAAGTACGGCACGACCAGATCGCC
GCGAATACTACCGCTACCACGCAGCCCAGCTACAAACCGACGCGTTGTCC
ATTTTCCAAGCGTCCTCCCCGCAAGTAATACGAGAGAATTGCGTCCATCT
CTTCGTCTTCGCAGCTACTCTGGGTATCCACATGCTCTGCGACACACTCG
TCTACCGCGAAGGAGGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTC
CACTTCTTCCGTGTTTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTC
GCATATGATTCAGGATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAG
ATCTGTATAAATTTAATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGTAA
back to topCoding sequence (CDS) from alignment at An02:530246..531095- >CBS51388_001417-T1 ID=CBS51388_001417-T1|Name=CBS51388_001417-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1602bp|location=Sequence derived from alignment at An02:530246..531095- (Aspergillus niger CBS 513.88)
TGCGATGAGAGACATCCCATTTGCTCGAATTGCCATAGCGCCGAGCGAGT
CTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAGCAGCTCCACGGCCAG
TAGTACATGCAGCCAGAGCAGCTTCACCGCCTATACCTCTCGGGAGTACA
CCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGCGCCCTTCCGCAGCCA
GGCCGTGAACATACTCCATATCGAGCTCTTCCACAATTTGTACACCAAGA
TCTGCACCAGCTTCGACCCCAACAGATCTATATCATGGCTAGCAGATGGT
GTGGACCCTACTACAGCCCCATATCTAGTCAACGAGCTGCTCGCATTTAG
TGCCCTACACCTAAGTACGGCACGACCAGATCGCCGCGAATACTACCGCT
ACCACGCAGCCCAGCTACAAACCGACGCGTTGTCCATTTTCCAAGCGTCC
TCCCCGCAAGTAATACGAGAGAATTGCGTCCATCTCTTCGTCTTCGCAGC
TACTCTGGGTATCCACATGCTCTGCGACACACTCGTCTACCGCGAAGGAG
GCGGCGACTTTGATACCTTCCTCGACCGCTTCGTCCACTTCTTCCGTGTT
TATCATGGTGTCCGTACCATTGTTAGCAAAGCCTCGCATATGATTCAGGA
TACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAGATCTGTATAAATTTA
ATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGTAAATGCCACAGAGAGTC
CACAAGAAATCTCGCAACGGATGTCTCGAGTGTAAGCGGCGCCATGTCAA
GTGCGATGAGAGACATCCCATTTGCTCGAATTGCCATAGCGCCGAGCGAG
TCTGTGAGTACGGAAGCCGCTCTTTGCTGAGAGCAGCAGCTCCACGGCCA
GTAGTACATGCAGCCAGAGCAGCTTCACCGCCTATACCTCTCGGGAGTAC
ACCGCGGGAGAGCCCTGAAAATGAACCCTCACAGGCGCCCTTCCGCAGCC
AGGCCGTGAACATACTCCATATCGAGCTCTTCCACAATTTGTACACCAAG
ATCTGCACCAGCTTCGACCCCAACAGATCTATATCATGGCTAGCAGATGG
TGTGGACCCTACTACAGCCCCATATCTAGTCAACGAGCTGCTCGCATTTA
GTGCCCTACACCTAAGTACGGCACGACCAGATCGCCGCGAATACTACCGC
TACCACGCAGCCCAGCTACAAACCGACGCGTTGTCCATTTTCCAAGCGTC
CTCCCCGCAAGTAATACGAGAGAATTGCGTCCATCTCTTCGTCTTCGCAG
CTACTCTGGGTATCCACATGCTCTGCGACACACTCGTCTACCGCGAAGGA
GGCGGCGACTTTGATACCTTCCTCGACCGCTTCGTCCACTTCTTCCGTGT
TTATCATGGTGTCCGTACCATTGTTAGCAAAGCCTCGCATATGATTCAGG
ATACGCCGCTCGGTTTAAGTTTCAACGTGGGCATAGATCTGTATAAATTT
AATGGATGTCTTGGGCCCGGCTGTCAGCGCCTGTAAATGCCACAGAGAGT
CCACAAGAAATCTCGCAACGGATGTCTCGAGTGTAAGCGGCGCCATGTCA
AG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:530246..531095 - |
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