|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:531446..532347+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001418-T1 ID=CBS51388_001418-T1|Name=CBS51388_001418-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=902bp|location=Sequence derived from alignment at An02:531446..532347+ (Aspergillus niger CBS 513.88)
ATGGCAAAACTCGAACCTTTTAGCGGCGACTACTATCTATGGGACTATGT
CCCTTCCATAGCCGCCTCGATCATCTTCTTCCTCATCTACCTCGCTCTAA
CTCTATTCCATGTCTGGAAGGCCTGGATAACCCGCGCACGCTTCTGCATC
CCCTTCATCATCGGTGGATTCTGTACGTCCTTCCTCTTTTTACCTGTCCC
TGCCATCTCGTTCACCATGACCCCTAACCATATGCAATCCACGCAGTTGA
AGTAATCGGCTTCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCCAACC
TAATCCTCTACATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGTTCTC
TTCTCCGCAAGCGTCTACATGGTCCTAGGCCGTCTGATTCGCAGCGTCAA
CGCAGAAAAGTACTCCCTCATCCGCATCACCCGAGTAACCAAAGTCTTCG
TCACCGGCGACATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGGGTTA
ATGGCCACGGACGGCCTAGAGAACATAGCAAAAGCCATCGTGATCATTGG
ATTGATGATCCAGATCATCATGTTTGGATTCTTCATCGTCGTGGCTACGG
TCTTTGAGAAGAGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTACACG
CATCATCTGTACCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCCGCTC
TATCTTTCGGGTTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTTTTGG
CGCATGAGTGGCCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGCTGTG
ATGGTTGTCTGGGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGGGGGG
TCTGGGGGCGCAGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATGGCAT
AG back to topCoding sequence (CDS) from alignment at An02:531446..532347+ >CBS51388_001418-T1 ID=CBS51388_001418-T1|Name=CBS51388_001418-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1656bp|location=Sequence derived from alignment at An02:531446..532347+ (Aspergillus niger CBS 513.88)
ATGGCAAAACTCGAACCTTTTAGCGGCGACTACTATCTATGGGACTATGT
CCCTTCCATAGCCGCCTCGATCATCTTCTTCCTCATCTACCTCGCTCTAA
CTCTATTCCATGTCTGGAAGGCCTGGATAACCCGCGCACGCTTCTGCATC
CCCTTCATCATCGGTGGATTCTTTGAAGTAATCGGCTTCGCCGTCCGCGC
CGCGTGCACCAACGCAACCGCCAACCTAATCCTCTACATCCTGCAAAGCG
TCTTCATCCTAATCGGCCCCGTTCTCTTCTCCGCAAGCGTCTACATGGTC
CTAGGCCGTCTGATTCGCAGCGTCAACGCAGAAAAGTACTCCCTCATCCG
CATCACCCGAGTAACCAAAGTCTTCGTCACCGGCGACATCCTCTCATTCC
TAGTACAGGGCCAAGGCTCAGGGTTAATGGCCACGGACGGCCTAGAGAAC
ATAGCAAAAGCCATCGTGATCATTGGATTGATGATCCAGATCATCATGTT
TGGATTCTTCATCGTCGTGGCTACGGTCTTTGAGAAGAGGATGAAGCGCG
CGCCGACGAGTCAGGCGCCGTACACGCATCATCTGTACCCTTTGTATGCG
GTTAGTTGGCTGATTATGCTCCGCTCTATCTTTCGGGTTTTTGAGTATGC
GTTGGGGCAGAAGGGCTATCTTTTGGCGCATGAGTGGCCGCTTTTTGTGT
TTGATGCGGTGCCGATGTCTGCTGTGATGGTTGTCTGGGGGTATTGGCAT
CCTGGGACGTTGAAGGCAGAGGGGGGTCTGGGGGCGCAGCAGGAGGTGGG
GATGGGCTGGTATCGGAGTATGGCATAGATGGCAAAACTCGAACCTTTTA
GCGGCGACTACTATCTATGGGACTATGTCCCTTCCATAGCCGCCTCGATC
ATCTTCTTCCTCATCTACCTCGCTCTAACTCTATTCCATGTCTGGAAGGC
CTGGATAACCCGCGCACGCTTCTGCATCCCCTTCATCATCGGTGGATTCT
TTGAAGTAATCGGCTTCGCCGTCCGCGCCGCGTGCACCAACGCAACCGCC
AACCTAATCCTCTACATCCTGCAAAGCGTCTTCATCCTAATCGGCCCCGT
TCTCTTCTCCGCAAGCGTCTACATGGTCCTAGGCCGTCTGATTCGCAGCG
TCAACGCAGAAAAGTACTCCCTCATCCGCATCACCCGAGTAACCAAAGTC
TTCGTCACCGGCGACATCCTCTCATTCCTAGTACAGGGCCAAGGCTCAGG
GTTAATGGCCACGGACGGCCTAGAGAACATAGCAAAAGCCATCGTGATCA
TTGGATTGATGATCCAGATCATCATGTTTGGATTCTTCATCGTCGTGGCT
ACGGTCTTTGAGAAGAGGATGAAGCGCGCGCCGACGAGTCAGGCGCCGTA
CACGCATCATCTGTACCCTTTGTATGCGGTTAGTTGGCTGATTATGCTCC
GCTCTATCTTTCGGGTTTTTGAGTATGCGTTGGGGCAGAAGGGCTATCTT
TTGGCGCATGAGTGGCCGCTTTTTGTGTTTGATGCGGTGCCGATGTCTGC
TGTGATGGTTGTCTGGGGGTATTGGCATCCTGGGACGTTGAAGGCAGAGG
GGGGTCTGGGGGCGCAGCAGGAGGTGGGGATGGGCTGGTATCGGAGTATG
GCATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007568 |
| DBxref | PFAM:PF04479 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:531446..532347 + |
|
