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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:573936..576112+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001426-T1 ID=CBS51388_001426-T1|Name=CBS51388_001426-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2177bp|location=Sequence derived from alignment at An02:573936..576112+ (Aspergillus niger CBS 513.88)
ATGACGGACTTCGGCCTACGCGCTCCCCATGGGCCCGATATGTCGGGAAC
CCATAATCCTCTCGAGGATATGGATATTCACGAGAAGGGTGCCTTTGACG
CCCTCATTCGCCCCGACGATAGCTATACCCCCGATGGCACGTATTGGGCC
GACTTGCCGCTTTTGAAGCGGGTCAAGTTCGTCGGTTCCTACGACGCGGC
AGAAGCCAAGCGGGAACTCAGTTCGATCTGGCAGATGACAAAGGAAGATC
CTCTATCGCCCATCTCGTATTATTTTCGAAATATGGTTCTTCCTGGTGCT
GGTCTGGGTCTCGAGGGGTTCGTATTCCTCCAAATCAACGGTTTCTGGAG
GCGCGTTATACTCACATTCTTCCCTCTTTAGTTACGTTTTGTTCTCCATC
GGAAACATCAAGCCATTGTTCGAGGCCTCCTTCAAGTCCTGCTGGGATGA
CCATACGATTTGCAACAAACAATGGATCAACGCTGTCGATTATCTCGAGA
TTGTCGGTATCATCTTCGGCCAGATTTTGGTCGGAATTGTCGGTGACTGG
TAAGTTTTCGATTTCTGGCAAATACATCGCGGCAATTATGGCTAACTTGA
TAATAGGCTCGGTCGTCGCTGGGGTCTTATCCAGGATGCTGCTATCATGT
TGCTGGGTTTGGTGATGCTTACTGCTGCTTGGGGTGTCACTGAGAACGGC
TGGGTTATCTGCTACGCTTGGTCATTGTTCGTCTACGGTATTGGTGTTGG
TAAGTACTCAATGAGACGTGAAAACTTTCGTGCTTCTCACTAACAATATG
ATTCTAGGTGGTGAATATCCCATGACAGCCACTAGCGGTATGGAAAATGC
TGTCGGCTCCGGAAAAGTCTCGACCAAGGAGGACCGCCTCCACCGTGGTC
GTAAGGTCACCAGTGCTTTCTTGATGCAGGGTTGGGGTCAATTCTTCAAC
CAGGCCATCCTGATTATTCTGCTGCTTATTTTCCACCACGGTAGTGGTAA
CCCGCCTTACTCTTCGGTGGCTACCCAGTGGACCTACCGCATTTCGTTCG
CCATTCCCGCCGTCGGCACCTTGTGGCTTGTGTACTACCGTGCTTACCAC
ATGAAGGCCGCCAGTAAGCAGCTTGCGGCGGCTAAGAAGAAGGCCTCTGT
TACTGGATACGATGTCAACTCCTTGAAGCTGACCTTCCGTTATTTCGGTT
TCCGCATTATCGCTACCGCGGGTGGCTGGTTCGCCAACGATGTCTTCTTT
TACGGAAACAAGCTTTTCAGTTCCGAGTTCATCAAGGTGCTTAGCCCTGG
AAGCACGTCTATCATGCCAACATGGCTCTGGAGTTTGTGCAACATCGGAG
TGTCATTGGCTGGTTACTACTGTGCGTCGTTCTTTGTCGACAACAAGCTT
TACGGTCGTAAGTGGATGCAGATGATCGGTTTCCTCATGTGCTTCATCCT
CTTCGTCGTCCCTGCTTTCCACTACGAGTACTACACTCGGCCTGAGAACA
TCCACGCTTTCCAGGCGATGTACTTCTTGAGTTCCTTCTTCAACCAGTTT
GGACCCAACTCTGTCACTTTCCTGGTGGCTGCCGAGGTGTTCCCGACTCC
CATCCGTGCGACTGCCCACGGTCTCTCTGCTGCTTGCGGTAAGAGCGGTG
CGCTGCTGGCATCCGTCTTGTACAACTACATCGACACCCAAACCAAGTTC
TACGTTGTCCCTTGGTTCGGTCTTGGTGGCATGGTCTTGACTCTGTTGTT
CCTGCCCGACACCACTGGTCTTGATTTGAAGGAGCAGGAGCGTCGCTGGC
AGTACATCCGCGACGGCCGCGAGCAAGATTACCATGGTCCTGCTATCCAC
GCCAAGCACCTTTCCCTCTGGGAGCGTGTGACCGGCGTCGGAAAGAACTA
CAACGCCGAACTCGACTACAAGCAGAAGGTCGAGGAGTACCGTGCCGAGT
GGGAGGCTGCTATGACCGCCAAGATCTCCGAGAACGAGAAGGGCGAGGAC
TTCGTGCAGGACACGGATGACTCCCTCCTTGAGGGCCATGTCCATGCCTA
CTTCCACCGCACCAGTCCCATGTTCCGCCCGATGGAGCAGACTGCCACTA
AGACGGATAATTTCGCGCTGCCTCCTGCGGCGCAAGATTCGTCTACGGAA
TCATATAACGAAAAGTCCGAACTATAA back to topCoding sequence (CDS) from alignment at An02:573936..576112+ >CBS51388_001426-T1 ID=CBS51388_001426-T1|Name=CBS51388_001426-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7992bp|location=Sequence derived from alignment at An02:573936..576112+ (Aspergillus niger CBS 513.88)
ATGACGGACTTCGGCCTACGCGCTCCCCATGGGCCCGATATGTCGGGAAC
CCATAATCCTCTCGAGGATATGGATATTCACGAGAAGGGTGCCTTTGACG
CCCTCATTCGCCCCGACGATAGCTATACCCCCGATGGCACGTATTGGGCC
GACTTGCCGCTTTTGAAGCGGGTCAAGTTCGTCGGTTCCTACGACGCGGC
AGAAGCCAAGCGGGAACTCAGTTCGATCTGGCAGATGACAAAGGAAGATC
CTCTATCGCCCATCTCGTATTATTTTCGAAATATGGTTCTTCCTGGTGCT
GGTCTGGGTCTCGAGGGTTACGTTTTGTTCTCCATCGGAAACATCAAGCC
ATTGTTCGAGGCCTCCTTCAAGTCCTGCTGGGATGACCATACGATTTGCA
ACAAACAATGGATCAACGCTGTCGATTATCTCGAGATTGTCGGTATCATC
TTCGGCCAGATTTTGGTCGGAATTGTCGGTGACTGGCTCGGTCGTCGCTG
GGGTCTTATCCAGGATGCTGCTATCATGTTGCTGGGTTTGGTGATGCTTA
CTGCTGCTTGGGGTGTCACTGAGAACGGCTGGGTTATCTGCTACGCTTGG
TCATTGTTCGTCTACGGTATTGGTGTTGGTGGTGAATATCCCATGACAGC
CACTAGCGGTATGGAAAATGCTGTCGGCTCCGGAAAAGTCTCGACCAAGG
AGGACCGCCTCCACCGTGGTCGTAAGGTCACCAGTGCTTTCTTGATGCAG
GGTTGGGGTCAATTCTTCAACCAGGCCATCCTGATTATTCTGCTGCTTAT
TTTCCACCACGGTAGTGGTAACCCGCCTTACTCTTCGGTGGCTACCCAGT
GGACCTACCGCATTTCGTTCGCCATTCCCGCCGTCGGCACCTTGTGGCTT
GTGTACTACCGTGCTTACCACATGAAGGCCGCCAGTAAGCAGCTTGCGGC
GGCTAAGAAGAAGGCCTCTGTTACTGGATACGATGTCAACTCCTTGAAGC
TGACCTTCCGTTATTTCGGTTTCCGCATTATCGCTACCGCGGGTGGCTGG
TTCGCCAACGATGTCTTCTTTTACGGAAACAAGCTTTTCAGTTCCGAGTT
CATCAAGGTGCTTAGCCCTGGAAGCACGTCTATCATGCCAACATGGCTCT
GGAGTTTGTGCAACATCGGAGTGTCATTGGCTGGTTACTACTGTGCGTCG
TTCTTTGTCGACAACAAGCTTTACGGTCGTAAGTGGATGCAGATGATCGG
TTTCCTCATGTGCTTCATCCTCTTCGTCGTCCCTGCTTTCCACTACGAGT
ACTACACTCGGCCTGAGAACATCCACGCTTTCCAGGCGATGTACTTCTTG
AGTTCCTTCTTCAACCAGTTTGGACCCAACTCTGTCACTTTCCTGGTGGC
TGCCGAGGTGTTCCCGACTCCCATCCGTGCGACTGCCCACGGTCTCTCTG
CTGCTTGCGGTAAGAGCGGTGCGCTGCTGGCATCCGTCTTGTACAACTAC
ATCGACACCCAAACCAAGTTCTACGTTGTCCCTTGGTTCGGTCTTGGTGG
CATGGTCTTGACTCTGTTGTTCCTGCCCGACACCACTGGTCTTGATTTGA
AGGAGCAGGAGCGTCGCTGGCAGTACATCCGCGACGGCCGCGAGCAAGAT
TACCATGGTCCTGCTATCCACGCCAAGCACCTTTCCCTCTGGGAGCGTGT
GACCGGCGTCGGAAAGAACTACAACGCCGAACTCGACTACAAGCAGAAGG
TCGAGGAGTACCGTGCCGAGTGGGAGGCTGCTATGACCGCCAAGATCTCC
GAGAACGAGAAGGGCGAGGACTTCGTGCAGGACACGGATGACTCCCTCCT
TGAGGGCCATGTCCATGCCTACTTCCACCGCACCAGTCCCATGTTCCGCC
CGATGGAGCAGACTGCCACTAAGACGGATAATTTCGCGCTGCCTCCTGCG
GCGCAAGATTCGTCTACGGAATCATATAACGAAAAGTCCGAACTATAAAT
GACGGACTTCGGCCTACGCGCTCCCCATGGGCCCGATATGTCGGGAACCC
ATAATCCTCTCGAGGATATGGATATTCACGAGAAGGGTGCCTTTGACGCC
CTCATTCGCCCCGACGATAGCTATACCCCCGATGGCACGTATTGGGCCGA
CTTGCCGCTTTTGAAGCGGGTCAAGTTCGTCGGTTCCTACGACGCGGCAG
AAGCCAAGCGGGAACTCAGTTCGATCTGGCAGATGACAAAGGAAGATCCT
CTATCGCCCATCTCGTATTATTTTCGAAATATGGTTCTTCCTGGTGCTGG
TCTGGGTCTCGAGGGTTACGTTTTGTTCTCCATCGGAAACATCAAGCCAT
TGTTCGAGGCCTCCTTCAAGTCCTGCTGGGATGACCATACGATTTGCAAC
AAACAATGGATCAACGCTGTCGATTATCTCGAGATTGTCGGTATCATCTT
CGGCCAGATTTTGGTCGGAATTGTCGGTGACTGGCTCGGTCGTCGCTGGG
GTCTTATCCAGGATGCTGCTATCATGTTGCTGGGTTTGGTGATGCTTACT
GCTGCTTGGGGTGTCACTGAGAACGGCTGGGTTATCTGCTACGCTTGGTC
ATTGTTCGTCTACGGTATTGGTGTTGGTGGTGAATATCCCATGACAGCCA
CTAGCGGTATGGAAAATGCTGTCGGCTCCGGAAAAGTCTCGACCAAGGAG
GACCGCCTCCACCGTGGTCGTAAGGTCACCAGTGCTTTCTTGATGCAGGG
TTGGGGTCAATTCTTCAACCAGGCCATCCTGATTATTCTGCTGCTTATTT
TCCACCACGGTAGTGGTAACCCGCCTTACTCTTCGGTGGCTACCCAGTGG
ACCTACCGCATTTCGTTCGCCATTCCCGCCGTCGGCACCTTGTGGCTTGT
GTACTACCGTGCTTACCACATGAAGGCCGCCAGTAAGCAGCTTGCGGCGG
CTAAGAAGAAGGCCTCTGTTACTGGATACGATGTCAACTCCTTGAAGCTG
ACCTTCCGTTATTTCGGTTTCCGCATTATCGCTACCGCGGGTGGCTGGTT
CGCCAACGATGTCTTCTTTTACGGAAACAAGCTTTTCAGTTCCGAGTTCA
TCAAGGTGCTTAGCCCTGGAAGCACGTCTATCATGCCAACATGGCTCTGG
AGTTTGTGCAACATCGGAGTGTCATTGGCTGGTTACTACTGTGCGTCGTT
CTTTGTCGACAACAAGCTTTACGGTCGTAAGTGGATGCAGATGATCGGTT
TCCTCATGTGCTTCATCCTCTTCGTCGTCCCTGCTTTCCACTACGAGTAC
TACACTCGGCCTGAGAACATCCACGCTTTCCAGGCGATGTACTTCTTGAG
TTCCTTCTTCAACCAGTTTGGACCCAACTCTGTCACTTTCCTGGTGGCTG
CCGAGGTGTTCCCGACTCCCATCCGTGCGACTGCCCACGGTCTCTCTGCT
GCTTGCGGTAAGAGCGGTGCGCTGCTGGCATCCGTCTTGTACAACTACAT
CGACACCCAAACCAAGTTCTACGTTGTCCCTTGGTTCGGTCTTGGTGGCA
TGGTCTTGACTCTGTTGTTCCTGCCCGACACCACTGGTCTTGATTTGAAG
GAGCAGGAGCGTCGCTGGCAGTACATCCGCGACGGCCGCGAGCAAGATTA
CCATGGTCCTGCTATCCACGCCAAGCACCTTTCCCTCTGGGAGCGTGTGA
CCGGCGTCGGAAAGAACTACAACGCCGAACTCGACTACAAGCAGAAGGTC
GAGGAGTACCGTGCCGAGTGGGAGGCTGCTATGACCGCCAAGATCTCCGA
GAACGAGAAGGGCGAGGACTTCGTGCAGGACACGGATGACTCCCTCCTTG
AGGGCCATGTCCATGCCTACTTCCACCGCACCAGTCCCATGTTCCGCCCG
ATGGAGCAGACTGCCACTAAGACGGATAATTTCGCGCTGCCTCCTGCGGC
GCAAGATTCGTCTACGGAATCATATAACGAAAAGTCCGAACTATAAATGA
CGGACTTCGGCCTACGCGCTCCCCATGGGCCCGATATGTCGGGAACCCAT
AATCCTCTCGAGGATATGGATATTCACGAGAAGGGTGCCTTTGACGCCCT
CATTCGCCCCGACGATAGCTATACCCCCGATGGCACGTATTGGGCCGACT
TGCCGCTTTTGAAGCGGGTCAAGTTCGTCGGTTCCTACGACGCGGCAGAA
GCCAAGCGGGAACTCAGTTCGATCTGGCAGATGACAAAGGAAGATCCTCT
ATCGCCCATCTCGTATTATTTTCGAAATATGGTTCTTCCTGGTGCTGGTC
TGGGTCTCGAGGGTTACGTTTTGTTCTCCATCGGAAACATCAAGCCATTG
TTCGAGGCCTCCTTCAAGTCCTGCTGGGATGACCATACGATTTGCAACAA
ACAATGGATCAACGCTGTCGATTATCTCGAGATTGTCGGTATCATCTTCG
GCCAGATTTTGGTCGGAATTGTCGGTGACTGGCTCGGTCGTCGCTGGGGT
CTTATCCAGGATGCTGCTATCATGTTGCTGGGTTTGGTGATGCTTACTGC
TGCTTGGGGTGTCACTGAGAACGGCTGGGTTATCTGCTACGCTTGGTCAT
TGTTCGTCTACGGTATTGGTGTTGGTGGTGAATATCCCATGACAGCCACT
AGCGGTATGGAAAATGCTGTCGGCTCCGGAAAAGTCTCGACCAAGGAGGA
CCGCCTCCACCGTGGTCGTAAGGTCACCAGTGCTTTCTTGATGCAGGGTT
GGGGTCAATTCTTCAACCAGGCCATCCTGATTATTCTGCTGCTTATTTTC
CACCACGGTAGTGGTAACCCGCCTTACTCTTCGGTGGCTACCCAGTGGAC
CTACCGCATTTCGTTCGCCATTCCCGCCGTCGGCACCTTGTGGCTTGTGT
ACTACCGTGCTTACCACATGAAGGCCGCCAGTAAGCAGCTTGCGGCGGCT
AAGAAGAAGGCCTCTGTTACTGGATACGATGTCAACTCCTTGAAGCTGAC
CTTCCGTTATTTCGGTTTCCGCATTATCGCTACCGCGGGTGGCTGGTTCG
CCAACGATGTCTTCTTTTACGGAAACAAGCTTTTCAGTTCCGAGTTCATC
AAGGTGCTTAGCCCTGGAAGCACGTCTATCATGCCAACATGGCTCTGGAG
TTTGTGCAACATCGGAGTGTCATTGGCTGGTTACTACTGTGCGTCGTTCT
TTGTCGACAACAAGCTTTACGGTCGTAAGTGGATGCAGATGATCGGTTTC
CTCATGTGCTTCATCCTCTTCGTCGTCCCTGCTTTCCACTACGAGTACTA
CACTCGGCCTGAGAACATCCACGCTTTCCAGGCGATGTACTTCTTGAGTT
CCTTCTTCAACCAGTTTGGACCCAACTCTGTCACTTTCCTGGTGGCTGCC
GAGGTGTTCCCGACTCCCATCCGTGCGACTGCCCACGGTCTCTCTGCTGC
TTGCGGTAAGAGCGGTGCGCTGCTGGCATCCGTCTTGTACAACTACATCG
ACACCCAAACCAAGTTCTACGTTGTCCCTTGGTTCGGTCTTGGTGGCATG
GTCTTGACTCTGTTGTTCCTGCCCGACACCACTGGTCTTGATTTGAAGGA
GCAGGAGCGTCGCTGGCAGTACATCCGCGACGGCCGCGAGCAAGATTACC
ATGGTCCTGCTATCCACGCCAAGCACCTTTCCCTCTGGGAGCGTGTGACC
GGCGTCGGAAAGAACTACAACGCCGAACTCGACTACAAGCAGAAGGTCGA
GGAGTACCGTGCCGAGTGGGAGGCTGCTATGACCGCCAAGATCTCCGAGA
ACGAGAAGGGCGAGGACTTCGTGCAGGACACGGATGACTCCCTCCTTGAG
GGCCATGTCCATGCCTACTTCCACCGCACCAGTCCCATGTTCCGCCCGAT
GGAGCAGACTGCCACTAAGACGGATAATTTCGCGCTGCCTCCTGCGGCGC
AAGATTCGTCTACGGAATCATATAACGAAAAGTCCGAACTATAAATGACG
GACTTCGGCCTACGCGCTCCCCATGGGCCCGATATGTCGGGAACCCATAA
TCCTCTCGAGGATATGGATATTCACGAGAAGGGTGCCTTTGACGCCCTCA
TTCGCCCCGACGATAGCTATACCCCCGATGGCACGTATTGGGCCGACTTG
CCGCTTTTGAAGCGGGTCAAGTTCGTCGGTTCCTACGACGCGGCAGAAGC
CAAGCGGGAACTCAGTTCGATCTGGCAGATGACAAAGGAAGATCCTCTAT
CGCCCATCTCGTATTATTTTCGAAATATGGTTCTTCCTGGTGCTGGTCTG
GGTCTCGAGGGTTACGTTTTGTTCTCCATCGGAAACATCAAGCCATTGTT
CGAGGCCTCCTTCAAGTCCTGCTGGGATGACCATACGATTTGCAACAAAC
AATGGATCAACGCTGTCGATTATCTCGAGATTGTCGGTATCATCTTCGGC
CAGATTTTGGTCGGAATTGTCGGTGACTGGCTCGGTCGTCGCTGGGGTCT
TATCCAGGATGCTGCTATCATGTTGCTGGGTTTGGTGATGCTTACTGCTG
CTTGGGGTGTCACTGAGAACGGCTGGGTTATCTGCTACGCTTGGTCATTG
TTCGTCTACGGTATTGGTGTTGGTGGTGAATATCCCATGACAGCCACTAG
CGGTATGGAAAATGCTGTCGGCTCCGGAAAAGTCTCGACCAAGGAGGACC
GCCTCCACCGTGGTCGTAAGGTCACCAGTGCTTTCTTGATGCAGGGTTGG
GGTCAATTCTTCAACCAGGCCATCCTGATTATTCTGCTGCTTATTTTCCA
CCACGGTAGTGGTAACCCGCCTTACTCTTCGGTGGCTACCCAGTGGACCT
ACCGCATTTCGTTCGCCATTCCCGCCGTCGGCACCTTGTGGCTTGTGTAC
TACCGTGCTTACCACATGAAGGCCGCCAGTAAGCAGCTTGCGGCGGCTAA
GAAGAAGGCCTCTGTTACTGGATACGATGTCAACTCCTTGAAGCTGACCT
TCCGTTATTTCGGTTTCCGCATTATCGCTACCGCGGGTGGCTGGTTCGCC
AACGATGTCTTCTTTTACGGAAACAAGCTTTTCAGTTCCGAGTTCATCAA
GGTGCTTAGCCCTGGAAGCACGTCTATCATGCCAACATGGCTCTGGAGTT
TGTGCAACATCGGAGTGTCATTGGCTGGTTACTACTGTGCGTCGTTCTTT
GTCGACAACAAGCTTTACGGTCGTAAGTGGATGCAGATGATCGGTTTCCT
CATGTGCTTCATCCTCTTCGTCGTCCCTGCTTTCCACTACGAGTACTACA
CTCGGCCTGAGAACATCCACGCTTTCCAGGCGATGTACTTCTTGAGTTCC
TTCTTCAACCAGTTTGGACCCAACTCTGTCACTTTCCTGGTGGCTGCCGA
GGTGTTCCCGACTCCCATCCGTGCGACTGCCCACGGTCTCTCTGCTGCTT
GCGGTAAGAGCGGTGCGCTGCTGGCATCCGTCTTGTACAACTACATCGAC
ACCCAAACCAAGTTCTACGTTGTCCCTTGGTTCGGTCTTGGTGGCATGGT
CTTGACTCTGTTGTTCCTGCCCGACACCACTGGTCTTGATTTGAAGGAGC
AGGAGCGTCGCTGGCAGTACATCCGCGACGGCCGCGAGCAAGATTACCAT
GGTCCTGCTATCCACGCCAAGCACCTTTCCCTCTGGGAGCGTGTGACCGG
CGTCGGAAAGAACTACAACGCCGAACTCGACTACAAGCAGAAGGTCGAGG
AGTACCGTGCCGAGTGGGAGGCTGCTATGACCGCCAAGATCTCCGAGAAC
GAGAAGGGCGAGGACTTCGTGCAGGACACGGATGACTCCCTCCTTGAGGG
CCATGTCCATGCCTACTTCCACCGCACCAGTCCCATGTTCCGCCCGATGG
AGCAGACTGCCACTAAGACGGATAATTTCGCGCTGCCTCCTGCGGCGCAA
GATTCGTCTACGGAATCATATAACGAAAAGTCCGAACTATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055085 | transmembrane transport |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0022857 | transmembrane transporter activity |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR020846 |
| DBxref | InterPro:IPR005828 |
| DBxref | PFAM:PF00083 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:573936..576112 + |
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