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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:578095..579745- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001427-T1 ID=CBS51388_001427-T1|Name=CBS51388_001427-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1651bp|location=Sequence derived from alignment at An02:578095..579745- (Aspergillus niger CBS 513.88)
ATGACAACTCTATCGTTCTCGCTCGCCCCGAAGGCGATATACCAACTACA
TGATGCTCTGATGTGTCTAGCAAAGTTCGACGATAGCGTGGCAATAGAAG
CTGAGATTGACCTGGCAAGTTGATGGCCTGATTGAAGGAGAAATACAGGC
CGAACTGGGCTAATTGATCACCGAAGCTTCGCTTAAGCGTGCTCAACTCG
ACCAAGACGGCCTACTCGGCGTTTGTCTTCGAAGCGGATGGCTTTTTCGA
GTCCTACTCTTTCGGTAGGGTGAGGAATGGCAGCTCGTCTAGGACTGCTC
ATCCAGACAAATTCAGCTGTCAGGTGCTAATTAAGGTCGGAACCTACGTA
CTAAGTAGTCTCGTATTTGGGCTGACATACCACAGGCCCTCCTATCGGCC
TTTAAAGGAAAGACGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTG
CGAGGTTGAGCTCCAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCA
TTAGATTAATATGTGGGCTTGGTAAGCATTCGATATGTTCTGAGTTCGGG
CTTATCTGCGGCTCCAGCTCACAGTCCTTAGGCGTCATCAAGCTCTACAA
GCTTACGTATGAACCTGTCCATGTGCAACATGCCATATTCGACAGATCCA
AAGCGACAAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACG
GATCATTTCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGG
CAAGGCTGTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGGTA
ATGCTACCGGACTGTTCCATGAGTTTACCAGCCTACTCACCGTCTGTCAC
AGAAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGGG
ACTTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCACATG
AAGGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGAT
CACCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAAT
CTGAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCCC
GGGGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCACG
TCAAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAGA
CCGCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGGG
ACTTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCCGCC
ATCGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAAT
GGGACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGGC
TGGGATGCCACTGGAGAGCAGGTATGGCTTAATCCGCCTTCTGCTTCAGG
CCTATTACTGACAAACCCCCAACAGACAAGCACAGGCCCTGGGTTACGAG
ATATCGAACCCCGAATGGCACAGGCAAGTCACGAGGAAGAGGAGATGGGA
ATTCCGCCCACTCAGCGCATGTCACAGGTAAGTCGAGCGCGTTCGCATCT
ATTGATCGTGCTGACAACCCGTAGCTGCACGGCCTCGGTCTCTTCGACTG
A back to topCoding sequence (CDS) from alignment at An02:578095..579745- >CBS51388_001427-T1 ID=CBS51388_001427-T1|Name=CBS51388_001427-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=8136bp|location=Sequence derived from alignment at An02:578095..579745- (Aspergillus niger CBS 513.88)
CTGCACGGCCTCGGTCTCTTCGACTGAACAAGCACAGGCCCTGGGTTACG
AGATATCGAACCCCGAATGGCACAGGCAAGTCACGAGGAAGAGGAGATGG
GAATTCCGCCCACTCAGCGCATGTCACAGAAATCCTTCGCCAGCCGGTGC
ACACGTCCGTAGCTATTGAGAAAAGGGACTTCGATTACTATTTAGCAGAA
GACCATCTTCACGTTGCCATCCACATGAAGGACTTCAAGGCGGCAATAGC
ACATGCTGAGACAGCAAACGCAAAGATCACCGCCCGGTTCACCCGTCCAT
CTCGCCCTCTGCAATTCGCCTACGAATCTGAGGGCGTCAAAACCGAATTT
ACGCTGATGACTAGAGGAGAGTCGCCCGGGGAGGACGTTCCGGGCTCCTC
TCGAGCAGCACCTCAGTTATCCGCACGTCAAACTCCAGCACCCGTGCAGA
TAAGCCAAAGGAACACGGCTCCAGAGACCGCACAAATGCCTCCTCCCCGC
AGTCGGTCGATCCGGCCACTCACTGGGACTTCTACTCGGGCTTCACAATC
CAACACCGAGACCCAACAACCTCCGCCATCGATGGAGTTCGACAGTCTGT
TCGTTCCAGCGGATGACGACAGGCAATGGGACGTACCAAATGATGAGGAT
GAAGGTCCAGTCGAGGACGAGCTCGGCTGGGATGCCACTGGAGAGCAGGC
CCTCCTATCGGCCTTTAAAGGAAAGACGAGTGGACGTGACAAGGACACTT
CTGTCGAACGGTGCGAGGTTGAGCTCCAGGAAGACCTTGATGAAACCGAA
TGCAGACTCGTCATTAGATTAATATGTGGGCTTGGTAAGCATTCGATATG
TTCTGAGTTCGGGCTTATCTGCGGCTCCAGCTCACAGTCCTTAGGCGTCA
TCAAGCTCTACAAGCTTACGTATGAACCTGTCCATGTGCAACATGCCATA
TTCGACAGATCCAAAGCGACAAACGAATGGAGTATTGAACCCAAGTACTT
GAAGGAGATAACGGATCATTTCGGCCCCTCAGCAGAGCATCTGGATATCT
ACTCCGAGCAAGGCAAGGCTGTCTTTACCAGCTTTACCACGAAAAGCTCA
GACGGAAAAGCTTCGCTTAAGCGTGCTCAACTCGACCAAGACGGCCTACT
CGGCGTTTGTCTTCGAAGCGGATGGCTTTTTCGAGTCCTACTCTTTCGGT
AGGGTGAGGAATGGCAGCTCGTCTAGGACTGCTCATCCAGACAAATTCAG
CTGTCAGGTGCTAATTAAGATGACAACTCTATCGTTCTCGCTCGCCCCGA
AGGCGATATACCAACTACATGATGCTCTGATGTGTCTAGCAAAGTTCGAC
GATAGCCTGCACGGCCTCGGTCTCTTCGACTGAACAAGCACAGGCCCTGG
GTTACGAGATATCGAACCCCGAATGGCACAGGCAAGTCACGAGGAAGAGG
AGATGGGAATTCCGCCCACTCAGCGCATGTCACAGAAATCCTTCGCCAGC
CGGTGCACACGTCCGTAGCTATTGAGAAAAGGGACTTCGATTACTATTTA
GCAGAAGACCATCTTCACGTTGCCATCCACATGAAGGACTTCAAGGCGGC
AATAGCACATGCTGAGACAGCAAACGCAAAGATCACCGCCCGGTTCACCC
GTCCATCTCGCCCTCTGCAATTCGCCTACGAATCTGAGGGCGTCAAAACC
GAATTTACGCTGATGACTAGAGGAGAGTCGCCCGGGGAGGACGTTCCGGG
CTCCTCTCGAGCAGCACCTCAGTTATCCGCACGTCAAACTCCAGCACCCG
TGCAGATAAGCCAAAGGAACACGGCTCCAGAGACCGCACAAATGCCTCCT
CCCCGCAGTCGGTCGATCCGGCCACTCACTGGGACTTCTACTCGGGCTTC
ACAATCCAACACCGAGACCCAACAACCTCCGCCATCGATGGAGTTCGACA
GTCTGTTCGTTCCAGCGGATGACGACAGGCAATGGGACGTACCAAATGAT
GAGGATGAAGGTCCAGTCGAGGACGAGCTCGGCTGGGATGCCACTGGAGA
GCAGGCCCTCCTATCGGCCTTTAAAGGAAAGACGAGTGGACGTGACAAGG
ACACTTCTGTCGAACGGTGCGAGGTTGAGCTCCAGGAAGACCTTGATGAA
ACCGAATGCAGACTCGTCATTAGATTAATATGTGGGCTTGGTAAGCATTC
GATATGTTCTGAGTTCGGGCTTATCTGCGGCTCCAGCTCACAGTCCTTAG
GCGTCATCAAGCTCTACAAGCTTACGTATGAACCTGTCCATGTGCAACAT
GCCATATTCGACAGATCCAAAGCGACAAACGAATGGAGTATTGAACCCAA
GTACTTGAAGGAGATAACGGATCATTTCGGCCCCTCAGCAGAGCATCTGG
ATATCTACTCCGAGCAAGGCAAGGCTGTCTTTACCAGCTTTACCACGAAA
AGCTCAGACGGAAAAGCTTCGCTTAAGCGTGCTCAACTCGACCAAGACGG
CCTACTCGGCGTTTGTCTTCGAAGCGGATGGCTTTTTCGAGTCCTACTCT
TTCGGTAGGGTGAGGAATGGCAGCTCGTCTAGGACTGCTCATCCAGACAA
ATTCAGCTGTCAGGTGCTAATTAAGATGACAACTCTATCGTTCTCGCTCG
CCCCGAAGGCGATATACCAACTACATGATGCTCTGATGTGTCTAGCAAAG
TTCGACGATAGCCTGCACGGCCTCGGTCTCTTCGACTGAACAAGCACAGG
CCCTGGGTTACGAGATATCGAACCCCGAATGGCACAGGCAAGTCACGAGG
AAGAGGAGATGGGAATTCCGCCCACTCAGCGCATGTCACAGAAATCCTTC
GCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGGGACTTCGATTAC
TATTTAGCAGAAGACCATCTTCACGTTGCCATCCACATGAAGGACTTCAA
GGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGATCACCGCCCGGT
TCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAATCTGAGGGCGTC
AAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCCCGGGGAGGACGT
TCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCACGTCAAACTCCAG
CACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAGACCGCACAAATG
CCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGGGACTTCTACTCG
GGCTTCACAATCCAACACCGAGACCCAACAACCTCCGCCATCGATGGAGT
TCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAATGGGACGTACCA
AATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGGCTGGGATGCCAC
TGGAGAGCAGGCCCTCCTATCGGCCTTTAAAGGAAAGACGAGTGGACGTG
ACAAGGACACTTCTGTCGAACGGTGCGAGGTTGAGCTCCAGGAAGACCTT
GATGAAACCGAATGCAGACTCGTCATTAGATTAATATGTGGGCTTGGTAA
GCATTCGATATGTTCTGAGTTCGGGCTTATCTGCGGCTCCAGCTCACAGT
CCTTAGGCGTCATCAAGCTCTACAAGCTTACGTATGAACCTGTCCATGTG
CAACATGCCATATTCGACAGATCCAAAGCGACAAACGAATGGAGTATTGA
ACCCAAGTACTTGAAGGAGATAACGGATCATTTCGGCCCCTCAGCAGAGC
ATCTGGATATCTACTCCGAGCAAGGCAAGGCTGTCTTTACCAGCTTTACC
ACGAAAAGCTCAGACGGAAAAGCTTCGCTTAAGCGTGCTCAACTCGACCA
AGACGGCCTACTCGGCGTTTGTCTTCGAAGCGGATGGCTTTTTCGAGTCC
TACTCTTTCGGTAGGGTGAGGAATGGCAGCTCGTCTAGGACTGCTCATCC
AGACAAATTCAGCTGTCAGGTGCTAATTAAGATGACAACTCTATCGTTCT
CGCTCGCCCCGAAGGCGATATACCAACTACATGATGCTCTGATGTGTCTA
GCAAAGTTCGACGATAGCCTGCACGGCCTCGGTCTCTTCGACTGAACAAG
CACAGGCCCTGGGTTACGAGATATCGAACCCCGAATGGCACAGGCAAGTC
ACGAGGAAGAGGAGATGGGAATTCCGCCCACTCAGCGCATGTCACAGAAA
TCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGGGACTTC
GATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCACATGAAGGA
CTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGATCACCG
CCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAATCTGAG
GGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCCCGGGGA
GGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCACGTCAAA
CTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAGACCGCA
CAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGGGACTTC
TACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCCGCCATCGA
TGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAATGGGAC
GTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGGCTGGGA
TGCCACTGGAGAGCAGGCCCTCCTATCGGCCTTTAAAGGAAAGACGAGTG
GACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGTTGAGCTCCAGGAA
GACCTTGATGAAACCGAATGCAGACTCGTCATTAGATTAATATGTGGGCT
TGGTAAGCATTCGATATGTTCTGAGTTCGGGCTTATCTGCGGCTCCAGCT
CACAGTCCTTAGGCGTCATCAAGCTCTACAAGCTTACGTATGAACCTGTC
CATGTGCAACATGCCATATTCGACAGATCCAAAGCGACAAACGAATGGAG
TATTGAACCCAAGTACTTGAAGGAGATAACGGATCATTTCGGCCCCTCAG
CAGAGCATCTGGATATCTACTCCGAGCAAGGCAAGGCTGTCTTTACCAGC
TTTACCACGAAAAGCTCAGACGGAAAAGCTTCGCTTAAGCGTGCTCAACT
CGACCAAGACGGCCTACTCGGCGTTTGTCTTCGAAGCGGATGGCTTTTTC
GAGTCCTACTCTTTCGGTAGGGTGAGGAATGGCAGCTCGTCTAGGACTGC
TCATCCAGACAAATTCAGCTGTCAGGTGCTAATTAAGATGACAACTCTAT
CGTTCTCGCTCGCCCCGAAGGCGATATACCAACTACATGATGCTCTGATG
TGTCTAGCAAAGTTCGACGATAGCCTGCACGGCCTCGGTCTCTTCGACTG
AACAAGCACAGGCCCTGGGTTACGAGATATCGAACCCCGAATGGCACAGG
CAAGTCACGAGGAAGAGGAGATGGGAATTCCGCCCACTCAGCGCATGTCA
CAGAAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAGAAAAGG
GACTTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCATCCACAT
GAAGGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACGCAAAGA
TCACCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCCTACGAA
TCTGAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGAGTCGCC
CGGGGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTATCCGCAC
GTCAAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCTCCAGAG
ACCGCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACTCACTGG
GACTTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAACCTCCGC
CATCGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGACAGGCAA
TGGGACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGAGCTCGG
CTGGGATGCCACTGGAGAGCAGGCCCTCCTATCGGCCTTTAAAGGAAAGA
CGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGTTGAGCTC
CAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGATTAATATG
TGGGCTTGGTAAGCATTCGATATGTTCTGAGTTCGGGCTTATCTGCGGCT
CCAGCTCACAGTCCTTAGGCGTCATCAAGCTCTACAAGCTTACGTATGAA
CCTGTCCATGTGCAACATGCCATATTCGACAGATCCAAAGCGACAAACGA
ATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACGGATCATTTCGGCC
CCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGGCAAGGCTGTCTTT
ACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGCTTCGCTTAAGCGTGC
TCAACTCGACCAAGACGGCCTACTCGGCGTTTGTCTTCGAAGCGGATGGC
TTTTTCGAGTCCTACTCTTTCGGTAGGGTGAGGAATGGCAGCTCGTCTAG
GACTGCTCATCCAGACAAATTCAGCTGTCAGGTGCTAATTAAGATGACAA
CTCTATCGTTCTCGCTCGCCCCGAAGGCGATATACCAACTACATGATGCT
CTGATGTGTCTAGCAAAGTTCGACGATAGCCTGCACGGCCTCGGTCTCTT
CGACTGAACAAGCACAGGCCCTGGGTTACGAGATATCGAACCCCGAATGG
CACAGGCAAGTCACGAGGAAGAGGAGATGGGAATTCCGCCCACTCAGCGC
ATGTCACAGAAATCCTTCGCCAGCCGGTGCACACGTCCGTAGCTATTGAG
AAAAGGGACTTCGATTACTATTTAGCAGAAGACCATCTTCACGTTGCCAT
CCACATGAAGGACTTCAAGGCGGCAATAGCACATGCTGAGACAGCAAACG
CAAAGATCACCGCCCGGTTCACCCGTCCATCTCGCCCTCTGCAATTCGCC
TACGAATCTGAGGGCGTCAAAACCGAATTTACGCTGATGACTAGAGGAGA
GTCGCCCGGGGAGGACGTTCCGGGCTCCTCTCGAGCAGCACCTCAGTTAT
CCGCACGTCAAACTCCAGCACCCGTGCAGATAAGCCAAAGGAACACGGCT
CCAGAGACCGCACAAATGCCTCCTCCCCGCAGTCGGTCGATCCGGCCACT
CACTGGGACTTCTACTCGGGCTTCACAATCCAACACCGAGACCCAACAAC
CTCCGCCATCGATGGAGTTCGACAGTCTGTTCGTTCCAGCGGATGACGAC
AGGCAATGGGACGTACCAAATGATGAGGATGAAGGTCCAGTCGAGGACGA
GCTCGGCTGGGATGCCACTGGAGAGCAGGCCCTCCTATCGGCCTTTAAAG
GAAAGACGAGTGGACGTGACAAGGACACTTCTGTCGAACGGTGCGAGGTT
GAGCTCCAGGAAGACCTTGATGAAACCGAATGCAGACTCGTCATTAGATT
AATATGTGGGCTTGGTAAGCATTCGATATGTTCTGAGTTCGGGCTTATCT
GCGGCTCCAGCTCACAGTCCTTAGGCGTCATCAAGCTCTACAAGCTTACG
TATGAACCTGTCCATGTGCAACATGCCATATTCGACAGATCCAAAGCGAC
AAACGAATGGAGTATTGAACCCAAGTACTTGAAGGAGATAACGGATCATT
TCGGCCCCTCAGCAGAGCATCTGGATATCTACTCCGAGCAAGGCAAGGCT
GTCTTTACCAGCTTTACCACGAAAAGCTCAGACGGAAAAGCTTCGCTTAA
GCGTGCTCAACTCGACCAAGACGGCCTACTCGGCGTTTGTCTTCGAAGCG
GATGGCTTTTTCGAGTCCTACTCTTTCGGTAGGGTGAGGAATGGCAGCTC
GTCTAGGACTGCTCATCCAGACAAATTCAGCTGTCAGGTGCTAATTAAGA
TGACAACTCTATCGTTCTCGCTCGCCCCGAAGGCGATATACCAACTACAT
GATGCTCTGATGTGTCTAGCAAAGTTCGACGATAGC back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0030896 | checkpoint clamp complex |
Vocabulary: Biological Process
| Term | Definition |
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| GO:0000077 | DNA damage checkpoint |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007268 |
| DBxref | PFAM:PF04139 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:578095..579745 - |
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