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CBS51388_001434-T1, CBS51388_001434-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001434-T1
Unique NameCBS51388_001434-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:612969..614117+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001434-T1 ID=CBS51388_001434-T1|Name=CBS51388_001434-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1149bp|location=Sequence derived from alignment at An02:612969..614117+ (Aspergillus niger CBS 513.88)
ATGGCCAGCGTACAACCACACTACACCCACGGGGACATCCGCGACGATGA
ATCGATCCTCGACGACGATGTGATTGAAGCTGATGACGGTATGTGAACTA
CCTACCTACCTACCTAGCTAGCTAGCTACCTTCCCTTTGTTTCCGATTCA
TCCCATACCCCATGTACCTATACATACATCTTTTACTAACATGATGTGTC
TAAAATCCCAGCCATCGAAGCCGACGACCCCCTCCATGACACCTCCGATA
CCGCCCCCCTCCGTGGAAACATCCAGCCCGAAGCCTCGAGCTCCGCTCGC
GGCGGCGGAAGCAATTTCTCCAGCAATTACCTGACGTCCACGATCGGCGG
CGAAGACCGCCGCGCGACACAGAGCACCATCGACGAGACGGTATGGGAGA
CGCTGTCGCGCGACTTGCGGGTCGTCTGGGAGAAGATGCGCCAGGTGTTG
TGGCCTAAGTATCTCATTGGGGGCATGTTGCAGCGCGGTGGGGGTGGAAT
TGGTGCCGCGGAGAGAGGTGAGGCTACGGGCTTTGGGGGTGGATTGAGGA
ACATGGTAGGACGCTGGCCGGATGCCGATGTTGTGTTGCAGGGTGGGATG
AGTGAGGGGTTGAGAGATTGGGATCTTTGGTGAGTTTCTTTTACATCTAC
TGTTGGGTGTGTGGGATGTGCTAACGGGTGCTTCTAGGGGTCCCTTGATC
TTCTGCCTCCTGCTGAGTATGTTCTTGTCGATGCGCGCCAAGGATGAGCA
GTCGTCGCTGGTGTTCTCGGGCGTTTTCTCCATCGTGTGGATTGGGGAGG
CGGTCGTGACGTTGCAGATTAAGTTGCTTGGTGGGAATATGTATGTTCTT
TACCCAGATTGGTAGATGAAGGGCAATTGCTAATGTTTTCTTCCGATAGC
TCGTTCTTCCAGTCGGTTTGTATTATCGGATACACGCTCTTCCCTCTGGT
CATTGCCTCTCTATTGAGTGCCTTTGGCCTTCCGACTATTGCGCGCATAC
CGGTGTATCTCGTGCTGATTGCGTGGTCGCTGGCGGCGGGCGTGAGTATC
CTGGGTGGTTCGGGCGTGTTGCGCAACCGGGTCGGCATTGCGGTATACCC
GCTGTTCGTGTTTTATATTGCGATCGGGTGTCTCTGCTTTATCAGTTAG
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Coding sequence (CDS) from alignment at An02:612969..614117+

>CBS51388_001434-T1 ID=CBS51388_001434-T1|Name=CBS51388_001434-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3636bp|location=Sequence derived from alignment at An02:612969..614117+ (Aspergillus niger CBS 513.88)
ATGGCCAGCGTACAACCACACTACACCCACGGGGACATCCGCGACGATGA
ATCGATCCTCGACGACGATGTGATTGAAGCTGATGACGCCATCGAAGCCG
ACGACCCCCTCCATGACACCTCCGATACCGCCCCCCTCCGTGGAAACATC
CAGCCCGAAGCCTCGAGCTCCGCTCGCGGCGGCGGAAGCAATTTCTCCAG
CAATTACCTGACGTCCACGATCGGCGGCGAAGACCGCCGCGCGACACAGA
GCACCATCGACGAGACGGTATGGGAGACGCTGTCGCGCGACTTGCGGGTC
GTCTGGGAGAAGATGCGCCAGGTGTTGTGGCCTAAGTATCTCATTGGGGG
CATGTTGCAGCGCGGTGGGGGTGGAATTGGTGCCGCGGAGAGAGGTGAGG
CTACGGGCTTTGGGGGTGGATTGAGGAACATGGTAGGACGCTGGCCGGAT
GCCGATGTTGTGTTGCAGGGTGGGATGAGTGAGGGGTTGAGAGATTGGGA
TCTTTGGGGTCCCTTGATCTTCTGCCTCCTGCTGAGTATGTTCTTGTCGA
TGCGCGCCAAGGATGAGCAGTCGTCGCTGGTGTTCTCGGGCGTTTTCTCC
ATCGTGTGGATTGGGGAGGCGGTCGTGACGTTGCAGATTAAGTTGCTTGG
TGGGAATATCTCGTTCTTCCAGTCGGTTTGTATTATCGGATACACGCTCT
TCCCTCTGGTCATTGCCTCTCTATTGAGTGCCTTTGGCCTTCCGACTATT
GCGCGCATACCGGTGTATCTCGTGCTGATTGCGTGGTCGCTGGCGGCGGG
CGTGAGTATCCTGGGTGGTTCGGGCGTGTTGCGCAACCGGGTCGGCATTG
CGGTATACCCGCTGTTCGTGTTTTATATTGCGATCGGGTGTCTCTGCTTT
ATCAGTTAGATGGCCAGCGTACAACCACACTACACCCACGGGGACATCCG
CGACGATGAATCGATCCTCGACGACGATGTGATTGAAGCTGATGACGCCA
TCGAAGCCGACGACCCCCTCCATGACACCTCCGATACCGCCCCCCTCCGT
GGAAACATCCAGCCCGAAGCCTCGAGCTCCGCTCGCGGCGGCGGAAGCAA
TTTCTCCAGCAATTACCTGACGTCCACGATCGGCGGCGAAGACCGCCGCG
CGACACAGAGCACCATCGACGAGACGGTATGGGAGACGCTGTCGCGCGAC
TTGCGGGTCGTCTGGGAGAAGATGCGCCAGGTGTTGTGGCCTAAGTATCT
CATTGGGGGCATGTTGCAGCGCGGTGGGGGTGGAATTGGTGCCGCGGAGA
GAGGTGAGGCTACGGGCTTTGGGGGTGGATTGAGGAACATGGTAGGACGC
TGGCCGGATGCCGATGTTGTGTTGCAGGGTGGGATGAGTGAGGGGTTGAG
AGATTGGGATCTTTGGGGTCCCTTGATCTTCTGCCTCCTGCTGAGTATGT
TCTTGTCGATGCGCGCCAAGGATGAGCAGTCGTCGCTGGTGTTCTCGGGC
GTTTTCTCCATCGTGTGGATTGGGGAGGCGGTCGTGACGTTGCAGATTAA
GTTGCTTGGTGGGAATATCTCGTTCTTCCAGTCGGTTTGTATTATCGGAT
ACACGCTCTTCCCTCTGGTCATTGCCTCTCTATTGAGTGCCTTTGGCCTT
CCGACTATTGCGCGCATACCGGTGTATCTCGTGCTGATTGCGTGGTCGCT
GGCGGCGGGCGTGAGTATCCTGGGTGGTTCGGGCGTGTTGCGCAACCGGG
TCGGCATTGCGGTATACCCGCTGTTCGTGTTTTATATTGCGATCGGGTGT
CTCTGCTTTATCAGTTAGATGGCCAGCGTACAACCACACTACACCCACGG
GGACATCCGCGACGATGAATCGATCCTCGACGACGATGTGATTGAAGCTG
ATGACGCCATCGAAGCCGACGACCCCCTCCATGACACCTCCGATACCGCC
CCCCTCCGTGGAAACATCCAGCCCGAAGCCTCGAGCTCCGCTCGCGGCGG
CGGAAGCAATTTCTCCAGCAATTACCTGACGTCCACGATCGGCGGCGAAG
ACCGCCGCGCGACACAGAGCACCATCGACGAGACGGTATGGGAGACGCTG
TCGCGCGACTTGCGGGTCGTCTGGGAGAAGATGCGCCAGGTGTTGTGGCC
TAAGTATCTCATTGGGGGCATGTTGCAGCGCGGTGGGGGTGGAATTGGTG
CCGCGGAGAGAGGTGAGGCTACGGGCTTTGGGGGTGGATTGAGGAACATG
GTAGGACGCTGGCCGGATGCCGATGTTGTGTTGCAGGGTGGGATGAGTGA
GGGGTTGAGAGATTGGGATCTTTGGGGTCCCTTGATCTTCTGCCTCCTGC
TGAGTATGTTCTTGTCGATGCGCGCCAAGGATGAGCAGTCGTCGCTGGTG
TTCTCGGGCGTTTTCTCCATCGTGTGGATTGGGGAGGCGGTCGTGACGTT
GCAGATTAAGTTGCTTGGTGGGAATATCTCGTTCTTCCAGTCGGTTTGTA
TTATCGGATACACGCTCTTCCCTCTGGTCATTGCCTCTCTATTGAGTGCC
TTTGGCCTTCCGACTATTGCGCGCATACCGGTGTATCTCGTGCTGATTGC
GTGGTCGCTGGCGGCGGGCGTGAGTATCCTGGGTGGTTCGGGCGTGTTGC
GCAACCGGGTCGGCATTGCGGTATACCCGCTGTTCGTGTTTTATATTGCG
ATCGGGTGTCTCTGCTTTATCAGTTAGATGGCCAGCGTACAACCACACTA
CACCCACGGGGACATCCGCGACGATGAATCGATCCTCGACGACGATGTGA
TTGAAGCTGATGACGCCATCGAAGCCGACGACCCCCTCCATGACACCTCC
GATACCGCCCCCCTCCGTGGAAACATCCAGCCCGAAGCCTCGAGCTCCGC
TCGCGGCGGCGGAAGCAATTTCTCCAGCAATTACCTGACGTCCACGATCG
GCGGCGAAGACCGCCGCGCGACACAGAGCACCATCGACGAGACGGTATGG
GAGACGCTGTCGCGCGACTTGCGGGTCGTCTGGGAGAAGATGCGCCAGGT
GTTGTGGCCTAAGTATCTCATTGGGGGCATGTTGCAGCGCGGTGGGGGTG
GAATTGGTGCCGCGGAGAGAGGTGAGGCTACGGGCTTTGGGGGTGGATTG
AGGAACATGGTAGGACGCTGGCCGGATGCCGATGTTGTGTTGCAGGGTGG
GATGAGTGAGGGGTTGAGAGATTGGGATCTTTGGGGTCCCTTGATCTTCT
GCCTCCTGCTGAGTATGTTCTTGTCGATGCGCGCCAAGGATGAGCAGTCG
TCGCTGGTGTTCTCGGGCGTTTTCTCCATCGTGTGGATTGGGGAGGCGGT
CGTGACGTTGCAGATTAAGTTGCTTGGTGGGAATATCTCGTTCTTCCAGT
CGGTTTGTATTATCGGATACACGCTCTTCCCTCTGGTCATTGCCTCTCTA
TTGAGTGCCTTTGGCCTTCCGACTATTGCGCGCATACCGGTGTATCTCGT
GCTGATTGCGTGGTCGCTGGCGGCGGGCGTGAGTATCCTGGGTGGTTCGG
GCGTGTTGCGCAACCGGGTCGGCATTGCGGTATACCCGCTGTTCGTGTTT
TATATTGCGATCGGGTGTCTCTGCTTTATCAGTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0016020membrane
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001434CBS51388_001434Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001434-T1.exon1CBS51388_001434-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001434-T1.exon2CBS51388_001434-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001434-T1.exon3CBS51388_001434-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001434-T1.exon4CBS51388_001434-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001434-T1.cdsCBS51388_001434-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001434-T1CBS51388_001434-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR006977
DBxrefPFAM:PF04893
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:612969..614117 +
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