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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:624835..627114- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001439-T1 ID=CBS51388_001439-T1|Name=CBS51388_001439-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2280bp|location=Sequence derived from alignment at An02:624835..627114- (Aspergillus niger CBS 513.88)
ATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGACCGGCTATACTCC
CTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCTCCGCCTACTCCA
TCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATACTGGCACAATCCA
TCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGTCGCCGCCTCCTA
TCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGCCCACCTCCGATC
AGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACCTGTCGATCCCGT
CGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAGATGTCGGAAGGG
CAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCATCCAAGTCAGGAA
CCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGTGGAAATGAGTCT
TCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGAGCCCATCGCCGA
CGAGGATGAGGATGGAACTAGTGTCGTGTCAAGTACCCGACTGTCCCCAA
CAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGACGACAAAGTGGT
CAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGCGACCGACTTGGG
TGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGTCCTCGGATACGT
CATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGTGTCGGTGTCACC
CTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGCACATCTGCCGGA
CGACCTGCGATTTTATCTCAACTACCACCAAGAATTCATCACGTACCGTC
ATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCATCAAAGTATCATT
GAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGTGGTGGGCTTTTC
TGCATATCATCATTGTGTTCAAAACAACAGTGGGAAACTATACACCTTTT
TGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAGTCCTTGGGCTCG
GGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCTTGTCCTCACCAC
ATTCGAGGTAAGACATTCAGCCAGTTTTTATGCTTCTTGCAAATGAACCC
TACTGACTCGCCAGGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCAC
CATCAGGCTGCTCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTGC
CAACCTGAACGAGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTCG
ACGTGGTAGCAGGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGAT
TGGTATGTTGCAAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATCC
AAACGATGCAACGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGGT
TTGGCCTGGAAATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGATT
CCAGTTAATGAGTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGGA
AAGGGTACGAACCATCCTAGAATCGTTCAACGACTCTGATTACACCGTGC
GGGAGTATCCTAATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCCG
TATGTTCCCGGGGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGAC
GTGGGTTGACTATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTTC
TTTCGGTCAGGCAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGAG
CTGGTCCGGCTAATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCGG
ATGCATCCTGGCGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGTC
CTCGCGATGAACGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCTG
GAGCAAAGCGGGTGAGTGTTGCAAGTCAGGGAGATGTTGGAAGTCAGCTA
ATTGTAGTCGATCAGATACGTTATTGCGGCCACTTTCCGGGCGGCACTGG
CAGCCTCGTGGCAGAAGCCCGAAGTCAATCGCTGGTGGTTGCCAGACGAC
GAAGGATACCCGAGCATCATCCGTGAGGTGCGAGCGATGACGGAAGAACG
CACGAGCCACCCTCGAGATAACTTCGGCGAGGATGTCAGCCATATGAAGA
CGCTATTTTGGAACATCAGCTTGGACGACACCTCCAGCGAGGGGAGTCCC
GCGTCGGTGAACACAGAAGGCCGACCATGA back to topCoding sequence (CDS) from alignment at An02:624835..627114- >CBS51388_001439-T1 ID=CBS51388_001439-T1|Name=CBS51388_001439-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=6507bp|location=Sequence derived from alignment at An02:624835..627114- (Aspergillus niger CBS 513.88)
ATACGTTATTGCGGCCACTTTCCGGGCGGCACTGGCAGCCTCGTGGCAGA
AGCCCGAAGTCAATCGCTGGTGGTTGCCAGACGACGAAGGATACCCGAGC
ATCATCCGTGAGGTGCGAGCGATGACGGAAGAACGCACGAGCCACCCTCG
AGATAACTTCGGCGAGGATGTCAGCCATATGAAGACGCTATTTTGGAACA
TCAGCTTGGACGACACCTCCAGCGAGGGGAGTCCCGCGTCGGTGAACACA
GAAGGCCGACCATGAGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCA
CCATCAGGCTGCTCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTG
CCAACCTGAACGAGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTC
GACGTGGTAGCAGGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGA
TTGGTATGTTGCAAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATC
CAAACGATGCAACGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGG
TTTGGCCTGGAAATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGAT
TCCAGTTAATGAGTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGG
AAAGGGTACGAACCATCCTAGAATCGTTCAACGACTCTGATTACACCGTG
CGGGAGTATCCTAATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCC
GTATGTTCCCGGGGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGA
CGTGGGTTGACTATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTT
CTTTCGGTCAGGCAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGA
GCTGGTCCGGCTAATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCG
GATGCATCCTGGCGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGT
CCTCGCGATGAACGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCT
GGAGCAAAGCGGATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGAC
CGGCTATACTCCCTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCT
CCGCCTACTCCATCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATAC
TGGCACAATCCATCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGT
CGCCGCCTCCTATCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGC
CCACCTCCGATCAGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACC
TGTCGATCCCGTCGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAG
ATGTCGGAAGGGCAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCAT
CCAAGTCAGGAACCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGT
GGAAATGAGTCTTCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGA
GCCCATCGCCGACGAGGATGAGGATGGAACTAGTGTCGTGTCAAGTACCC
GACTGTCCCCAACAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGA
CGACAAAGTGGTCAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGC
GACCGACTTGGGTGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGT
CCTCGGATACGTCATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGT
GTCGGTGTCACCCTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGC
ACATCTGCCGGACGACCTGCGATTTTATCTCAACTACCACCAAGAATTCA
TCACGTACCGTCATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCAT
CAAAGTATCATTGAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGT
GGTGGGCTTTTCTGCATATCATCATTGTGTTCAAAACAACAGTGGGAAAC
TATACACCTTTTTGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAG
TCCTTGGGCTCGGGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCT
TGTCCTCACCACATTCGAGATACGTTATTGCGGCCACTTTCCGGGCGGCA
CTGGCAGCCTCGTGGCAGAAGCCCGAAGTCAATCGCTGGTGGTTGCCAGA
CGACGAAGGATACCCGAGCATCATCCGTGAGGTGCGAGCGATGACGGAAG
AACGCACGAGCCACCCTCGAGATAACTTCGGCGAGGATGTCAGCCATATG
AAGACGCTATTTTGGAACATCAGCTTGGACGACACCTCCAGCGAGGGGAG
TCCCGCGTCGGTGAACACAGAAGGCCGACCATGAGAATCCGTCGGGGACT
GGGTCAACCTCATTGGCCACCATCAGGCTGCTCACGCCTTGGTGCGGGAG
ATCCTAACGCCGGAGTCTGCCAACCTGAACGAGCTACATGGCAACATCTT
CGTTTGGTACGCCCGATTCGACGTGGTAGCAGGGATTTTGGCCGGAAATG
AGACGATCCTAAGTCGTGATTGGTATGTTGCAAAAGAGGAGTATGATGCT
CAGGAAGCCGCCCGCCATCCAAACGATGCAACGAAGCAACTGGCGCTGGC
GAATTCGATCAACCGCCGGTTTGGCCTGGAAATGGCGTCATTATATGCGA
AGTTGTCGCGCGGTTTGATTCCAGTTAATGAGTTCATTATCCAGAACGAG
TTGTTGGGGCAGACCTTGGAAAGGGTACGAACCATCCTAGAATCGTTCAA
CGACTCTGATTACACCGTGCGGGAGTATCCTAATCAGGTTCCCTTGACCC
CGGACGACGTCGTGGATCCGTATGTTCCCGGGGGAATGCACCACGGGCCC
CTGTGGGAAGTCAACATGACGTGGGTTGACTATTACTCCACCAAGGCCAT
GTACAAGTATCAGTCACTTCTTTCGGTCAGGCAATCATCGGTGGAAGAGT
TACAATCCCTCTCGGTGGAGCTGGTCCGGCTAATGGAGGCGGTTGATCGA
TGGCCCATGAAGGAAAGCGGATGCATCCTGGCGTTCAAGAACAGCATCGG
AATGGCCGCCATGTTCTGTCCTCGCGATGAACGGTACATTATGTGGGCGC
GGAGGAAGTTCGCTCAGCTGGAGCAAAGCGGATGGCACCTCCATACTCCA
GTTCCCAGGCCGCCTTGACCGGCTATACTCCCTCATTCCTGTCGCTACAG
GACCAGAACGCTCCTCTCTCCGCCTACTCCATCCTAGGATCCGGTCAATA
TCCCGATAGTGTCGCATACTGGCACAATCCATCCGCGCAACCCCAGCCGC
CGCTACCTCCCGCCGCCGTCGCCGCCTCCTATCCGTCCGTGCCCCCGAAG
GCCCAGTCGCTCCTCCAGCCCACCTCCGATCAGAAGAAGCATAAGCGTAC
TCGCAGTGGCTGTTTCACCTGTCGATCCCGTCGCATCAAGTGCGACGAAG
CACGTCCCGTCTGCGACAGATGTCGGAAGGGCAACCGCGACTGCGTCTAT
CCGTCAGCCACAGGTGCATCCAAGTCAGGAACCCGTAGCGTGTCCAAGCC
CAGAGGATCACTGTTGCGTGGAAATGAGTCTTCCGCTCACCCGGGATCCG
AGGACTTCCGCGTCTTGGAGCCCATCGCCGACGAGGATGAGGATGGAACT
AGTGTCGTGTCAAGTACCCGACTGTCCCCAACAGCCGCACCCACATGGTC
TAAACCCAACCTCCCCAGACGACAAAGTGGTCAGTCTTTGAAGCAGCAGG
GTGGGAGGCATGTTGTTGCGACCGACTTGGGTGGTGCACGGATTGAGAAT
AGTAACTCGCCGTCCCCGTCCTCGGATACGTCATCTAGATACGACTCGCT
AAGCGCTCGGTCGGCCAGTGTCGGTGTCACCCTGCCCGAACCATATGGAT
CCACTCTGCCCAGTATAGCACATCTGCCGGACGACCTGCGATTTTATCTC
AACTACCACCAAGAATTCATCACGTACCGTCATTATTTCTTAAAACCGGT
CAATGACCGGTTTGTCCATCAAAGTATCATTGAGCTGGCGTTGCAGTATG
ATCCCCTGCTGTATGCCGTGGTGGGCTTTTCTGCATATCATCATTGTGTT
CAAAACAACAGTGGGAAACTATACACCTTTTTGAAATATTACAACTTCGC
GTTGAAGCTCCTGCGCAAGTCCTTGGGCTCGGGTGAGCCGCATAATGAGG
CGACTCTGATCACGGTGCTTGTCCTCACCACATTCGAGATACGTTATTGC
GGCCACTTTCCGGGCGGCACTGGCAGCCTCGTGGCAGAAGCCCGAAGTCA
ATCGCTGGTGGTTGCCAGACGACGAAGGATACCCGAGCATCATCCGTGAG
GTGCGAGCGATGACGGAAGAACGCACGAGCCACCCTCGAGATAACTTCGG
CGAGGATGTCAGCCATATGAAGACGCTATTTTGGAACATCAGCTTGGACG
ACACCTCCAGCGAGGGGAGTCCCGCGTCGGTGAACACAGAAGGCCGACCA
TGAGAATCCGTCGGGGACTGGGTCAACCTCATTGGCCACCATCAGGCTGC
TCACGCCTTGGTGCGGGAGATCCTAACGCCGGAGTCTGCCAACCTGAACG
AGCTACATGGCAACATCTTCGTTTGGTACGCCCGATTCGACGTGGTAGCA
GGGATTTTGGCCGGAAATGAGACGATCCTAAGTCGTGATTGGTATGTTGC
AAAAGAGGAGTATGATGCTCAGGAAGCCGCCCGCCATCCAAACGATGCAA
CGAAGCAACTGGCGCTGGCGAATTCGATCAACCGCCGGTTTGGCCTGGAA
ATGGCGTCATTATATGCGAAGTTGTCGCGCGGTTTGATTCCAGTTAATGA
GTTCATTATCCAGAACGAGTTGTTGGGGCAGACCTTGGAAAGGGTACGAA
CCATCCTAGAATCGTTCAACGACTCTGATTACACCGTGCGGGAGTATCCT
AATCAGGTTCCCTTGACCCCGGACGACGTCGTGGATCCGTATGTTCCCGG
GGGAATGCACCACGGGCCCCTGTGGGAAGTCAACATGACGTGGGTTGACT
ATTACTCCACCAAGGCCATGTACAAGTATCAGTCACTTCTTTCGGTCAGG
CAATCATCGGTGGAAGAGTTACAATCCCTCTCGGTGGAGCTGGTCCGGCT
AATGGAGGCGGTTGATCGATGGCCCATGAAGGAAAGCGGATGCATCCTGG
CGTTCAAGAACAGCATCGGAATGGCCGCCATGTTCTGTCCTCGCGATGAA
CGGTACATTATGTGGGCGCGGAGGAAGTTCGCTCAGCTGGAGCAAAGCGG
ATGGCACCTCCATACTCCAGTTCCCAGGCCGCCTTGACCGGCTATACTCC
CTCATTCCTGTCGCTACAGGACCAGAACGCTCCTCTCTCCGCCTACTCCA
TCCTAGGATCCGGTCAATATCCCGATAGTGTCGCATACTGGCACAATCCA
TCCGCGCAACCCCAGCCGCCGCTACCTCCCGCCGCCGTCGCCGCCTCCTA
TCCGTCCGTGCCCCCGAAGGCCCAGTCGCTCCTCCAGCCCACCTCCGATC
AGAAGAAGCATAAGCGTACTCGCAGTGGCTGTTTCACCTGTCGATCCCGT
CGCATCAAGTGCGACGAAGCACGTCCCGTCTGCGACAGATGTCGGAAGGG
CAACCGCGACTGCGTCTATCCGTCAGCCACAGGTGCATCCAAGTCAGGAA
CCCGTAGCGTGTCCAAGCCCAGAGGATCACTGTTGCGTGGAAATGAGTCT
TCCGCTCACCCGGGATCCGAGGACTTCCGCGTCTTGGAGCCCATCGCCGA
CGAGGATGAGGATGGAACTAGTGTCGTGTCAAGTACCCGACTGTCCCCAA
CAGCCGCACCCACATGGTCTAAACCCAACCTCCCCAGACGACAAAGTGGT
CAGTCTTTGAAGCAGCAGGGTGGGAGGCATGTTGTTGCGACCGACTTGGG
TGGTGCACGGATTGAGAATAGTAACTCGCCGTCCCCGTCCTCGGATACGT
CATCTAGATACGACTCGCTAAGCGCTCGGTCGGCCAGTGTCGGTGTCACC
CTGCCCGAACCATATGGATCCACTCTGCCCAGTATAGCACATCTGCCGGA
CGACCTGCGATTTTATCTCAACTACCACCAAGAATTCATCACGTACCGTC
ATTATTTCTTAAAACCGGTCAATGACCGGTTTGTCCATCAAAGTATCATT
GAGCTGGCGTTGCAGTATGATCCCCTGCTGTATGCCGTGGTGGGCTTTTC
TGCATATCATCATTGTGTTCAAAACAACAGTGGGAAACTATACACCTTTT
TGAAATATTACAACTTCGCGTTGAAGCTCCTGCGCAAGTCCTTGGGCTCG
GGTGAGCCGCATAATGAGGCGACTCTGATCACGGTGCTTGTCCTCACCAC
ATTCGAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0042025 | host cell nucleus |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006355 | regulation of transcription, DNA-templated |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0000981 | DNA-binding transcription factor activity, RNA polymerase II-specific |
| GO:0008270 | zinc ion binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036864 |
| DBxref | InterPro:IPR021858 |
| DBxref | InterPro:IPR001138 |
| DBxref | PFAM:PF00172 |
| DBxref | PFAM:PF11951 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:624835..627114 - |
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