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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:657086..657881+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001451-T1 ID=CBS51388_001451-T1|Name=CBS51388_001451-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=796bp|location=Sequence derived from alignment at An02:657086..657881+ (Aspergillus niger CBS 513.88)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGGTACGTATCTGTACTTCCTTTGGGACCCTTT
TTCACAGTGTCTGTCGCAATCCTGCAACCAGCGCAGACGACGTGCCCATC
CGCTACCCCAGCAAACAACACCAACCCACGGACCATGACATGACATGATA
AGCTAACTAATACCTCGCACAGCAATACCAAACCTACCTCGACGCCTCCA
CCCCATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTC
TTCTTCCTGAGGATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACAC
CCTCGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGT
TCGACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCC
GCTCCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCG
CCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTA
TCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGG
CCTGTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCAGTACGTA
TACCAGTTCTGCTTATCTGTGGTGGGAGGCGAAACCGGCAGAAGGCTAAC
CCAAATTCACTACTAGTGCGCCGCCAGATCCAGCACATGATCAAGTACCG
CTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAA back to topCoding sequence (CDS) from alignment at An02:657086..657881+ >CBS51388_001451-T1 ID=CBS51388_001451-T1|Name=CBS51388_001451-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1710bp|location=Sequence derived from alignment at An02:657086..657881+ (Aspergillus niger CBS 513.88)
ATGGACGTTCCTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCA
AACCTCGAAGCTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCC
CATTCACAGCCTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTC
TTCCTGAGGATCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCT
CGGCATCTACCTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCG
ACCCCTCCCTGACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCT
CCCAGCCTGCCCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCG
TCTCCCCGAGTTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCG
GCTTCGTTTGCTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCT
GTCTTGGTGGTCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCA
GATCCAGCACATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGA
CGCGGTACGGCCGGTCATAAATGGACGTTCCTGAGCCTGAGCAGACGCCT
TTCACGGCCGTGACGGCGCAAACCTCGAAGCTGGCTAGGCAATACCAAAC
CTACCTCGACGCCTCCACCCCATTCACAGCCTACCGCTGGACCGGCACCG
TCGTCCTGCTCCTCGTCTTCTTCCTGAGGATCGTCCTCGCCCAGGGATGG
TACATCGTGGCCTACACCCTCGGCATCTACCTGCTCAACCTCTTCCTCCT
CTTCCTGCAACCCAAGTTCGACCCCTCCCTGACGCAGGATGAGGGTCTGG
AAGACGGCGACGCCGCCGCTCCCAGCCTGCCCATGAAGCAAGACGACGAA
TTCCGTCCTTTCATCCGCCGTCTCCCCGAGTTCAAGTTCTGGCACTCGGC
CACTCGCGCCATTCTTATCGGCTTCGTTTGCTCGTGGTTCGCCGTCTTCG
ATATCCCGGTGTTCTGGCCTGTCTTGGTGGTCTACTGGATTATTCTCTTT
GTGTTGACCATGCGCCGCCAGATCCAGCACATGATCAAGTACCGCTACGT
GCCGTTCTCGTTCGGTAAGACGCGGTACGGCCGGTCATAAATGGACGTTC
CTGAGCCTGAGCAGACGCCTTTCACGGCCGTGACGGCGCAAACCTCGAAG
CTGGCTAGGCAATACCAAACCTACCTCGACGCCTCCACCCCATTCACAGC
CTACCGCTGGACCGGCACCGTCGTCCTGCTCCTCGTCTTCTTCCTGAGGA
TCGTCCTCGCCCAGGGATGGTACATCGTGGCCTACACCCTCGGCATCTAC
CTGCTCAACCTCTTCCTCCTCTTCCTGCAACCCAAGTTCGACCCCTCCCT
GACGCAGGATGAGGGTCTGGAAGACGGCGACGCCGCCGCTCCCAGCCTGC
CCATGAAGCAAGACGACGAATTCCGTCCTTTCATCCGCCGTCTCCCCGAG
TTCAAGTTCTGGCACTCGGCCACTCGCGCCATTCTTATCGGCTTCGTTTG
CTCGTGGTTCGCCGTCTTCGATATCCCGGTGTTCTGGCCTGTCTTGGTGG
TCTACTGGATTATTCTCTTTGTGTTGACCATGCGCCGCCAGATCCAGCAC
ATGATCAAGTACCGCTACGTGCCGTTCTCGTTCGGTAAGACGCGGTACGG
CCGGTCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016021 | integral component of membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09265ANI |
| DBxref | InterPro:IPR004932 |
| DBxref | PFAM:PF03248 |
| Product | retention in endoplasmic reticulum protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:657086..657881 + |
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