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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:672609..673444- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001457-T1 ID=CBS51388_001457-T1|Name=CBS51388_001457-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=836bp|location=Sequence derived from alignment at An02:672609..673444- (Aspergillus niger CBS 513.88)
ATGGGAGGCTCCTTGTCTCGTATGTGGTCCTTTCTCTGGACGAAGAAGGA
GATTCGCATCCTCATCCTCGGTCTGGTAGGTATAATCATGCTTTGGCACT
AGGCATCAAGCTACTAGCGAGTTTCATACTAACCCGCGCTCCCATCTCTA
GGATAACGCCGGAAAAACAACACTTCTTTACAGACTCAAGGTGCGTATAG
CCTTGCAGAGCTACTCTACTGTCAGCTAGAGGCCAGTGTTAATGTGCCAG
GAATAGATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGT
CGAATCGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGTAAGTCAAC
GCTACAATACCATTATAGTTGCCATTTGGTAGAGAAAAAGTATCTGAGGT
TGCTGACTTTTCGCTGTCGTTCAGGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGGT
ATGTGCATCTTCAAGCTCCTTTCCTTCACTTTGGATAAGTACTGACCTTT
TATACACAGCAAACTCTTCAGTCTGAAAACGCATGA back to topCoding sequence (CDS) from alignment at An02:672609..673444- >CBS51388_001457-T1 ID=CBS51388_001457-T1|Name=CBS51388_001457-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2745bp|location=Sequence derived from alignment at An02:672609..673444- (Aspergillus niger CBS 513.88)
CAAACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCAT
TCGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCG
TCATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTA
GCGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATT
TGCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAG
AGGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCA
TGCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGT
GATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAAT
CGGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAA
ACAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTG
GTCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGC
AAACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATT
CGACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGT
CATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAG
CGGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTT
GCCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGA
GGCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCAT
GCTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTG
ATTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATC
GGTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAA
CAACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGG
TCCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCA
AACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTC
GACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTC
ATTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGC
GGCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTG
CCAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAG
GCTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATG
CTCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGA
TTGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCG
GTGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAAC
AACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGT
CCTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAA
ACTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCG
ACCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCA
TTGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCG
GCTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGC
CAACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGG
CTCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGC
TCTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGAT
TGGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGG
TGACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACA
ACACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTC
CTTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTGCAAA
CTCTTCAGTCTGAAAACGCATGAGATCTCGGAGGTCAAACGTCCATTCGA
CCTTACTGGCGCTGCTACTATGCGAACACCGCTGCTGTCATATTCGTCAT
TGATTCCACAGATATTGAGCGACTCGGCACGGCTGCTGACGAACTAGCGG
CTATGCTGAATGAGGAGGAACTTCGTGATGCGGCGCTGTTGGTATTTGCC
AACAAGCAGGACCAGCCTGGCGCCAAAGGTGCCGGCGAAATATCAGAGGC
TCTCAAGCTGGGAGAGCTAAGGGATAGAAACTGGAGCATCGTCGCATGCT
CTGCTATCGACGGCAAAGGTCTTAACGAAGGCATGGATTGGCTGGTGATT
GGTGAAGTTGTTACCACGATACCAACCATTGGTTTCAACGTCGAATCGGT
GACGTATCGCAACTTGAATTTCAATGTCTGGGATAACGCCGGAAAAACAA
CACTTCTTTACAGACTCAAGATGGGAGGCTCCTTGTCTCGTATGTGGTCC
TTTCTCTGGACGAAGAAGGAGATTCGCATCCTCATCCTCGGTCTG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005525 | GTP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264RJ7 |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR005225 |
| DBxref | InterPro:IPR006689 |
| DBxref | PFAM:PF09439 |
| DBxref | PFAM:PF08477 |
| DBxref | PFAM:PF00071 |
| DBxref | PFAM:PF01926 |
| DBxref | PFAM:PF00025 |
| Product | Arf GTPase arl1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:672609..673444 - |
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