You are here

Home

CBS51388_001480-T1, CBS51388_001480-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001480-T1
Unique NameCBS51388_001480-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:720561..721174-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001480-T1 ID=CBS51388_001480-T1|Name=CBS51388_001480-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=614bp|location=Sequence derived from alignment at An02:720561..721174- (Aspergillus niger CBS 513.88)
ATGGCTCCGACAACTCCCCTCCGACCATCCAAGATGCCAGCACCTAGCGT
TCGTCCGCTATCCCAACTGACCCCGTTCGAGCAGCTCGTGCACAGCTACT
CTACGGGGCCTCCGACATTGAATAAGAACGAGGAGGCACGTACTATACAT
CATTATCTTTGTCCTCCATCCCCCATCCGCAAACAGCATGCTAACCATCC
GCACAGGCCTGGGACTTCTTCCCGGACGAATGCAACCTCCGGTTCGAGTC
CGCCACTCAGGATCCCCCGGCCCGCGTCTCGTATCTTCTCAAAGTAATTC
CAAAGCAATGCAATTACCTCCAGAACCTGCATGGCGGGTGCGCAGCCACC
TTGATTGATATTCTTTCCTCGACATTGCTTATAGCATTGTCCAAACCGGG
CTTGTACTCTTATGGTGGTGTGAGCCGGAACTTGAAGACTACGTATATCC
GCCCAGTGCCGGCGGGAACTGAGATCCGGGTGGTGTGTGAACTGGTTCAT
ATGGGGAAGCGGATGGCACTACTACGGGCGGAGATTCAGAAATTAGATGG
GAGTGTCTGTGTCGTCGCCGAGCATGATAAGGCCAATTCGGATCCCGCGG
ATATCAAGATCTGA
back to top

Coding sequence (CDS) from alignment at An02:720561..721174-

>CBS51388_001480-T1 ID=CBS51388_001480-T1|Name=CBS51388_001480-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=912bp|location=Sequence derived from alignment at An02:720561..721174- (Aspergillus niger CBS 513.88)
GCCTGGGACTTCTTCCCGGACGAATGCAACCTCCGGTTCGAGTCCGCCAC
TCAGGATCCCCCGGCCCGCGTCTCGTATCTTCTCAAAGTAATTCCAAAGC
AATGCAATTACCTCCAGAACCTGCATGGCGGGTGCGCAGCCACCTTGATT
GATATTCTTTCCTCGACATTGCTTATAGCATTGTCCAAACCGGGCTTGTA
CTCTTATGGTGGTGTGAGCCGGAACTTGAAGACTACGTATATCCGCCCAG
TGCCGGCGGGAACTGAGATCCGGGTGGTGTGTGAACTGGTTCATATGGGG
AAGCGGATGGCACTACTACGGGCGGAGATTCAGAAATTAGATGGGAGTGT
CTGTGTCGTCGCCGAGCATGATAAGGCCAATTCGGATCCCGCGGATATCA
AGATCTGAATGGCTCCGACAACTCCCCTCCGACCATCCAAGATGCCAGCA
CCTAGCGCCTGGGACTTCTTCCCGGACGAATGCAACCTCCGGTTCGAGTC
CGCCACTCAGGATCCCCCGGCCCGCGTCTCGTATCTTCTCAAAGTAATTC
CAAAGCAATGCAATTACCTCCAGAACCTGCATGGCGGGTGCGCAGCCACC
TTGATTGATATTCTTTCCTCGACATTGCTTATAGCATTGTCCAAACCGGG
CTTGTACTCTTATGGTGGTGTGAGCCGGAACTTGAAGACTACGTATATCC
GCCCAGTGCCGGCGGGAACTGAGATCCGGGTGGTGTGTGAACTGGTTCAT
ATGGGGAAGCGGATGGCACTACTACGGGCGGAGATTCAGAAATTAGATGG
GAGTGTCTGTGTCGTCGCCGAGCATGATAAGGCCAATTCGGATCCCGCGG
ATATCAAGATCTGAATGGCTCCGACAACTCCCCTCCGACCATCCAAGATG
CCAGCACCTAGC
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001480CBS51388_001480Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001480-T1CBS51388_001480-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001480-T1.cdsCBS51388_001480-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001480-T1.exon2CBS51388_001480-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001480-T1.exon1CBS51388_001480-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR029069
DBxrefInterPro:IPR003736
DBxrefInterPro:IPR006683
DBxrefPFAM:PF03061
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:720561..721174 -
Powered by Drupal