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CBS51388_001496-T1, CBS51388_001496-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001496-T1
Unique NameCBS51388_001496-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:791872..792541+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001496-T1 ID=CBS51388_001496-T1|Name=CBS51388_001496-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=670bp|location=Sequence derived from alignment at An02:791872..792541+ (Aspergillus niger CBS 513.88)
ATGGCGGCTCCGGCCGTATCATACAAGGTAATATCCCGAGGTTTCCCCTC
CTCATTGACAGCAGTCACTAACCATATACACCACATCTAGGACCGGCAGT
TCCTTGCGGTCATAGGAGATGAAGAGTGAGCCACACCACTACTACCTGAT
GAGAGAGGCACTTCCGCTGACTGTTTATTTCCAGCTCCGTAACAGGCCTC
CTCCTTGCCGGTGTCGGTGTACGTATCCTCAAAGCACAACAGCCAGATAA
CGACAAACATGCGACCACAACTAACATGATACATTGAAGCATGTCACGGA
TGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAGACTGAGA
CTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAGGAAAGAT
ATCGCCATTGTCCTTATCAACCAGCATGTATGTGTCTTGTTACAACTTCG
CAGTGTCCCTAACCTGCGACGCCTGCGTATTATACAATTATTTGAGTGCT
TTCATACGGCCGCTTACAATTGGATATAGATTGCAGAGCGTATCCGGCAC
AGCGTCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATCCCGAG
CAAGGACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCGGGTGC
GACGGCTGTTTGGAGAGTAG
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Coding sequence (CDS) from alignment at An02:791872..792541+

>CBS51388_001496-T1 ID=CBS51388_001496-T1|Name=CBS51388_001496-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1875bp|location=Sequence derived from alignment at An02:791872..792541+ (Aspergillus niger CBS 513.88)
ATGGCGGCTCCGGCCGTATCATACAAGGACCGGCAGTTCCTTGCGGTCAT
AGGAGATGAAGACTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTCATG
TCACGGATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAG
ACTGAGACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAG
GAAAGATATCGCCATTGTCCTTATCAACCAGCATATTGCAGAGCGTATCC
GGCACAGCGTCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATC
CCGAGCAAGGACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCG
GGTGCGACGGCTGTTTGGAGAGTAGATGGCGGCTCCGGCCGTATCATACA
AGGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGACTCCGTAACAGGC
CTCCTCCTTGCCGGTGTCGGTCATGTCACGGATGGCGCAGATGCCCAGCG
AAACTTCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAG
CGTTCCAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATC
AACCAGCATATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGA
GGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACC
CTGAAAAGGATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAG
ATGGCGGCTCCGGCCGTATCATACAAGGACCGGCAGTTCCTTGCGGTCAT
AGGAGATGAAGACTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTCATG
TCACGGATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAG
ACTGAGACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAG
GAAAGATATCGCCATTGTCCTTATCAACCAGCATATTGCAGAGCGTATCC
GGCACAGCGTCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATC
CCGAGCAAGGACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCG
GGTGCGACGGCTGTTTGGAGAGTAGATGGCGGCTCCGGCCGTATCATACA
AGGACCGGCAGTTCCTTGCGGTCATAGGAGATGAAGACTCCGTAACAGGC
CTCCTCCTTGCCGGTGTCGGTCATGTCACGGATGGCGCAGATGCCCAGCG
AAACTTCCTTGTGGTAGACTCGAAGACTGAGACTGCCACGATCGAGAAAG
CGTTCCAGAACTTCACTCAGGAGAGGAAAGATATCGCCATTGTCCTTATC
AACCAGCATATTGCAGAGCGTATCCGGCACAGCGTCGATTCCTACGCCGA
GGCTTTCCCTGCCGTTCTCGAGATCCCGAGCAAGGACCACCCATATGACC
CTGAAAAGGATAGTGTACTCAAGCGGGTGCGACGGCTGTTTGGAGAGTAG
ATGGCGGCTCCGGCCGTATCATACAAGGACCGGCAGTTCCTTGCGGTCAT
AGGAGATGAAGACTCCGTAACAGGCCTCCTCCTTGCCGGTGTCGGTCATG
TCACGGATGGCGCAGATGCCCAGCGAAACTTCCTTGTGGTAGACTCGAAG
ACTGAGACTGCCACGATCGAGAAAGCGTTCCAGAACTTCACTCAGGAGAG
GAAAGATATCGCCATTGTCCTTATCAACCAGCATATTGCAGAGCGTATCC
GGCACAGCGTCGATTCCTACGCCGAGGCTTTCCCTGCCGTTCTCGAGATC
CCGAGCAAGGACCACCCATATGACCCTGAAAAGGATAGTGTACTCAAGCG
GGTGCGACGGCTGTTTGGAGAGTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0033180proton-transporting V-type ATPase, V1 domain
Vocabulary: Molecular Function
TermDefinition
GO:0046961proton-transporting ATPase activity, rotational mechanism
Vocabulary: Biological Process
TermDefinition
GO:0034220ion transmembrane transport
GO:1902600proton transmembrane transport
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
VMA7CBS51388_001496Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001496-T1CBS51388_001496-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001496-T1.exon1CBS51388_001496-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001496-T1.exon2CBS51388_001496-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001496-T1.exon3CBS51388_001496-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001496-T1.exon4CBS51388_001496-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001496-T1.exon5CBS51388_001496-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001496-T1.cdsCBS51388_001496-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteBUSCO:EOG09265FI4
DBxrefInterPro:IPR036906
DBxrefInterPro:IPR008218
DBxrefInterPro:IPR005772
DBxrefPFAM:PF01990
ProductH( )-transporting V1 sector ATPase subunit F
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:791872..792541 +
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