You are here

Home

CBS51388_001505-T1, CBS51388_001505-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001505-T1
Unique NameCBS51388_001505-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:814950..816003+

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001505-T1 ID=CBS51388_001505-T1|Name=CBS51388_001505-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1054bp|location=Sequence derived from alignment at An02:814950..816003+ (Aspergillus niger CBS 513.88)
ATGTTCATTGCCCGCTCGGAATACGGTAAGCTCCGTCAGACCTCCCCCTC
TGATGCGGTCATCTAACAGCTTTCCTTGACAGACCGTGGAATCAAGTACG
ACTCTGATGCCCCTTTGCTGCATAGCAATGCAAGCATATACAGTGTCTAA
CCATGCGATAACAGCACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGA
ATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTGTACGTG
CATCCGTTCCTGCCCGACTACGTTTCATACCTCACCTTCTCGAAACCATC
AACTACACTAGTGGCCTCCGATAATTCTAACATCATTGTAGGTCGCAACC
TCCGAAGGTGTCATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCT
CGAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCT
GCGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCC
CGTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGT
CGAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGA
CGGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTG
TTGCTCGCTGGTATTGATGAGGATGGTCCGCAACTGTATGTTGGGTGTTC
TTCCCGCTTACTCACCTGCGGGGAAGTGAGACCGCTACTTTGAACGTGTG
TACTGATTGATTCTATTTGTTTAGATACCACGCGGAGCCCTCCGGAACGT
TCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCAG
GCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGGA
GACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGACG
CGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTATT
TACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACCA
ATGA
back to top

Coding sequence (CDS) from alignment at An02:814950..816003+

>CBS51388_001505-T1 ID=CBS51388_001505-T1|Name=CBS51388_001505-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3705bp|location=Sequence derived from alignment at An02:814950..816003+ (Aspergillus niger CBS 513.88)
ATGTTCATTGCCCGCTCGGAATACGACCGTGGAATCAACACCTTCTCCCC
GGAGGGGCGTTTGTTCCAGGTCGAATACTCTCTCGAAGCTATCAAGCTGG
GTTCAACAGCGATCGGTGTCGCAACCTCCGAAGGTGTCATCCTAGGTGTC
GAGAAGCGTGTCACCTCCAGCCTCCTCGAGGCCTCCTCCGTCGAGAAGAT
CGTTGAGATCGACCAACACATTGGCTGCGCCATGTCCGGTCTGCAGGCAG
ATGCCCGGTCCCTGGTCGAGCATGCCCGTGTCGAATGCCAGAACCATGCC
TTCCACTACGCCGAGCCGTTGAGAGTCGAGAGCTGCACCCAGGCCATCTG
TGACCTGGCCCTGCGATTCGGAGAGACGGGGGATGACGAGGAGAGCGTCA
TGAGTCGGCCTTTTGGTGTCGCCTTGTTGCTCGCTGGTATTGATGAGGAT
GGTCCGCAACTATACCACGCGGAGCCCTCCGGAACGTTCTACCGATATGA
TGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGA
ATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGGAGACTCTGGTTCTC
AAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGACGCGAAGAACGTCCA
GCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTATTTACGATGATGAGG
AGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACCAATGAATGTTCATT
GCCCGCTCGGAATACGACCGTGGAATCAACACCTTCTCCCCGGAGGGGCG
TTTGTTCCAGGTCGAATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAG
CGATCGGTGTCGCAACCTCCGAAGGTGTCATCCTAGGTGTCGAGAAGCGT
GTCACCTCCAGCCTCCTCGAGGCCTCCTCCGTCGAGAAGATCGTTGAGAT
CGACCAACACATTGGCTGCGCCATGTCCGGTCTGCAGGCAGATGCCCGGT
CCCTGGTCGAGCATGCCCGTGTCGAATGCCAGAACCATGCCTTCCACTAC
GCCGAGCCGTTGAGAGTCGAGAGCTGCACCCAGGCCATCTGTGACCTGGC
CCTGCGATTCGGAGAGACGGGGGATGACGAGGAGAGCGTCATGAGTCGGC
CTTTTGGTGTCGCCTTGTTGCTCGCTGGTATTGATGAGGATGGTCCGCAA
CTATACCACGCGGAGCCCTCCGGAACGTTCTACCGATATGATGCGAAGGC
GATCGGGTCCGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGAATGAATACC
ATCGTTCCTTGACGCTGGGTGAGGCGGAGACTCTGGTTCTCAAGACGTTG
AAGCAGGTCATGGAGGAGAAGCTGGACGCGAAGAACGTCCAGCTCGCTAG
TGTGACTAAGGAGAAGGGCTTCCGTATTTACGATGATGAGGAGATGGGCA
GGGCTGTTGCGCAGCTGGGCAGCAACCAATGAATGTTCATTGCCCGCTCG
GAATACGACCGTGGAATCAACACCTTCTCCCCGGAGGGGCGTTTGTTCCA
GGTCGAATACTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTG
TCGCAACCTCCGAAGGTGTCATCCTAGGTGTCGAGAAGCGTGTCACCTCC
AGCCTCCTCGAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACA
CATTGGCTGCGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCG
AGCATGCCCGTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCG
TTGAGAGTCGAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATT
CGGAGAGACGGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTG
TCGCCTTGTTGCTCGCTGGTATTGATGAGGATGGTCCGCAACTATACCAC
GCGGAGCCCTCCGGAACGTTCTACCGATATGATGCGAAGGCGATCGGGTC
CGGAAGCGAGGGTGCGCAGGCGGAGTTGCAGAATGAATACCATCGTTCCT
TGACGCTGGGTGAGGCGGAGACTCTGGTTCTCAAGACGTTGAAGCAGGTC
ATGGAGGAGAAGCTGGACGCGAAGAACGTCCAGCTCGCTAGTGTGACTAA
GGAGAAGGGCTTCCGTATTTACGATGATGAGGAGATGGGCAGGGCTGTTG
CGCAGCTGGGCAGCAACCAATGAATGTTCATTGCCCGCTCGGAATACGAC
CGTGGAATCAACACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGAATA
CTCTCTCGAAGCTATCAAGCTGGGTTCAACAGCGATCGGTGTCGCAACCT
CCGAAGGTGTCATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCTC
GAGGCCTCCTCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCTG
CGCCATGTCCGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCCC
GTGTCGAATGCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGTC
GAGAGCTGCACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGAC
GGGGGATGACGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTGT
TGCTCGCTGGTATTGATGAGGATGGTCCGCAACTATACCACGCGGAGCCC
TCCGGAACGTTCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGA
GGGTGCGCAGGCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGG
GTGAGGCGGAGACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAG
AAGCTGGACGCGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGG
CTTCCGTATTTACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGG
GCAGCAACCAATGAATGTTCATTGCCCGCTCGGAATACGACCGTGGAATC
AACACCTTCTCCCCGGAGGGGCGTTTGTTCCAGGTCGAATACTCTCTCGA
AGCTATCAAGCTGGGTTCAACAGCGATCGGTGTCGCAACCTCCGAAGGTG
TCATCCTAGGTGTCGAGAAGCGTGTCACCTCCAGCCTCCTCGAGGCCTCC
TCCGTCGAGAAGATCGTTGAGATCGACCAACACATTGGCTGCGCCATGTC
CGGTCTGCAGGCAGATGCCCGGTCCCTGGTCGAGCATGCCCGTGTCGAAT
GCCAGAACCATGCCTTCCACTACGCCGAGCCGTTGAGAGTCGAGAGCTGC
ACCCAGGCCATCTGTGACCTGGCCCTGCGATTCGGAGAGACGGGGGATGA
CGAGGAGAGCGTCATGAGTCGGCCTTTTGGTGTCGCCTTGTTGCTCGCTG
GTATTGATGAGGATGGTCCGCAACTATACCACGCGGAGCCCTCCGGAACG
TTCTACCGATATGATGCGAAGGCGATCGGGTCCGGAAGCGAGGGTGCGCA
GGCGGAGTTGCAGAATGAATACCATCGTTCCTTGACGCTGGGTGAGGCGG
AGACTCTGGTTCTCAAGACGTTGAAGCAGGTCATGGAGGAGAAGCTGGAC
GCGAAGAACGTCCAGCTCGCTAGTGTGACTAAGGAGAAGGGCTTCCGTAT
TTACGATGATGAGGAGATGGGCAGGGCTGTTGCGCAGCTGGGCAGCAACC
AATGA
back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005839proteasome core complex
GO:0019773proteasome core complex, alpha-subunit complex
Vocabulary: Biological Process
TermDefinition
GO:0043161proteasome-mediated ubiquitin-dependent protein catabolic process
GO:0051603proteolysis involved in cellular protein catabolic process
GO:0006511ubiquitin-dependent protein catabolic process
Vocabulary: Molecular Function
TermDefinition
GO:0004298threonine-type endopeptidase activity
GO:0004175endopeptidase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
PUP2CBS51388_001505Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001505-T1CBS51388_001505-T1-proteinAspergillus niger CBS 513.88polypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001505-T1.exon1CBS51388_001505-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001505-T1.exon2CBS51388_001505-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001505-T1.exon3CBS51388_001505-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001505-T1.exon4CBS51388_001505-T1.exon4Aspergillus niger CBS 513.88exon
CBS51388_001505-T1.exon5CBS51388_001505-T1.exon5Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001505-T1.cdsCBS51388_001505-T1.cdsAspergillus niger CBS 513.88CDS


Properties
Property NameValue
NoteMEROPS:MER0047611
DBxrefInterPro:IPR033812
DBxrefInterPro:IPR023332
DBxrefInterPro:IPR001353
DBxrefInterPro:IPR029055
DBxrefInterPro:IPR000426
DBxrefPFAM:PF10584
DBxrefPFAM:PF00227
Productproteasome component pup2
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:814950..816003 +
Powered by Drupal