|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:828595..829832+ Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001509-T1 ID=CBS51388_001509-T1|Name=CBS51388_001509-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1238bp|location=Sequence derived from alignment at An02:828595..829832+ (Aspergillus niger CBS 513.88)
ATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGGTGAGATACTGTTCC
CCTCCGCAATAATTTCTCCGATTAGGAGACTGTCCGCATCTCCAGCGGCA
CTCCGATGTTGTCATACAGCCAAGACTTCAACCCAAGCATCTATACTAAC
ATGCTATGTCTTATCGAATAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCA
CTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAA
CTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGAT
TGTCCACCAGAAGCTCCTTCAAGTGACGTGCGTAATATTTCCCCCCGTAA
CCTCTCATCTCTCAGTCACCTAACATGTTGGCCCTATCACATGCAGTTCC
CAATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTT
CAACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGG
CCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCC
AAGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGC
AGGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCA
CTGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGT
CTGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACAC
CACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCG
AGAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCA
GTCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGA
GCAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGA
TGAAGAACGTACGTTGCTTCGTCTGCGTGGAAGAAAGTGTAAAGACTGAC
AGGATTTTTCAGGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGA
CTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCA
GCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGGTATGA
TCGATCAATATTCACAGGTGGTGTTTCATCGTGACTAATTGGCATCTTCC
TGCAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAA back to topCoding sequence (CDS) from alignment at An02:828595..829832+ >CBS51388_001509-T1 ID=CBS51388_001509-T1|Name=CBS51388_001509-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4590bp|location=Sequence derived from alignment at An02:828595..829832+ (Aspergillus niger CBS 513.88)
ATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGCGCGAGCTTCTCGCC
CTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCG
ACGACCGGACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTG
GATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGACTTCCCAATA
CTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTCAACG
ACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCC
TCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCC
GCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTT
CCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCG
CTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGC
CCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTC
TTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAAC
GCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAG
GGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGG
CGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAG
AACGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGATCGC
GGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAGCTGG
CTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGGCCAGCTACCGTAAG
AGCCGTGAGGGCGCTTAAATGGATAAGTTCCAGGCGTTCGGAAAGAACCT
CAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGG
AGCAGCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTACATC
GAGCTGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCT
TCAAGTGACTTCCCAATACTCCAACGAGGCGTATGACTACCCGCCCAACA
TTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGAGAAGGTCCAG
CTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGC
CCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCC
GCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAG
GACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGT
GGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGG
CTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCA
CGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAG
CAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTC
GTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAG
GCTGTGAGCGTGATGAAGAACGTCCTCGATACCCCGGAACCTCTGCGGAA
CCTGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACG
AGATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAA
GAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAAATGGATAAGTTCCA
GGCGTTCGGAAAGAACCTCAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCA
CTCAGCAGATGATCAAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAA
CTTCCCGATGAGTACATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGAT
TGTCCACCAGAAGCTCCTTCAAGTGACTTCCCAATACTCCAACGAGGCGT
ATGACTACCCGCCCAACATTCGCGAATCCTTCAACGACATGGGCCGCACC
ATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGC
TCAGGCTGCCCTGACTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCT
TTAACCACGCTATTGCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCG
CAGAGCTCGCACGGTGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGC
TTTGGCATCGGAGAAGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGA
TCCAATCTCGCTTCTTGGCTGGCTGGAACACCACTCTTAACACGAACTTG
ATGTTCGCGGCGAAGGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCT
CGACTCGATCAAGGCAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACA
GCCTGAGCGAGGAGGCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTC
GTCGGACAGACCGAGGAGGCTGTGAGCGTGATGAAGAACGTCCTCGATAC
CCCGGAACCTCTGCGGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGT
ACCACAAGCGGTCTTACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGAT
GGCTTGCAGGTTGAGCAAGAGGCCAGCTACCGTAAGAGCCGTGAGGGCGC
TTAAATGGATAAGTTCCAGGCGTTCGGAAAGAACCTCAGCGCGAGCTTCT
CGCCCTTTGCTGCGCGCACTCAGCAGATGATCAAGGAGCAGCTCGGCCAG
GCCGACGACCGGACTCAACTTCCCGATGAGTACATCGAGCTGGAGAAGCG
GGTGGATGCCCTGAAGATTGTCCACCAGAAGCTCCTTCAAGTGACTTCCC
AATACTCCAACGAGGCGTATGACTACCCGCCCAACATTCGCGAATCCTTC
AACGACATGGGCCGCACCATCAGCGAGAAGGTCCAGCTCCTTTCCCAGGC
CTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGACTGCCCCTCCCTCGGCCA
AGCCGCAGCCCAAGACCTTTAACCACGCTATTGCCCGCGCCTCTCTGGCA
GGTTCCCAGACTCTGGCGCAGAGCTCGCACGGTGAGGACCCTCTGGCCAC
TGCGCTGGAGAAGTACGCTTTGGCATCGGAGAAGGTGGGCGAGGCCCGTC
TGGCCCAGGATGCTCAGATCCAATCTCGCTTCTTGGCTGGCTGGAACACC
ACTCTTAACACGAACTTGATGTTCGCGGCGAAGGCACGTAAGAACGTCGA
GAACGCTCGTCTTATGCTCGACTCGATCAAGGCAAGCAAGAAGGCCGCAG
TCAGGGGTGACTGGGACAGCCTGAGCGAGGAGGCTCGTGCGGAGATTGAG
CAGGCGGAGGATGAGTTCGTCGGACAGACCGAGGAGGCTGTGAGCGTGAT
GAAGAACGTCCTCGATACCCCGGAACCTCTGCGGAACCTGGCCGACTTGA
TCGCGGCGCAGCTAGAGTACCACAAGCGGTCTTACGAGATACTCAGCGAG
CTGGCTCCTGTTGTCGATGGCTTGCAGGTTGAGCAAGAGGCCAGCTACCG
TAAGAGCCGTGAGGGCGCTTAAATGGATAAGTTCCAGGCGTTCGGAAAGA
ACCTCAGCGCGAGCTTCTCGCCCTTTGCTGCGCGCACTCAGCAGATGATC
AAGGAGCAGCTCGGCCAGGCCGACGACCGGACTCAACTTCCCGATGAGTA
CATCGAGCTGGAGAAGCGGGTGGATGCCCTGAAGATTGTCCACCAGAAGC
TCCTTCAAGTGACTTCCCAATACTCCAACGAGGCGTATGACTACCCGCCC
AACATTCGCGAATCCTTCAACGACATGGGCCGCACCATCAGCGAGAAGGT
CCAGCTCCTTTCCCAGGCCTCCTCTCCCGCCGAGGCTCAGGCTGCCCTGA
CTGCCCCTCCCTCGGCCAAGCCGCAGCCCAAGACCTTTAACCACGCTATT
GCCCGCGCCTCTCTGGCAGGTTCCCAGACTCTGGCGCAGAGCTCGCACGG
TGAGGACCCTCTGGCCACTGCGCTGGAGAAGTACGCTTTGGCATCGGAGA
AGGTGGGCGAGGCCCGTCTGGCCCAGGATGCTCAGATCCAATCTCGCTTC
TTGGCTGGCTGGAACACCACTCTTAACACGAACTTGATGTTCGCGGCGAA
GGCACGTAAGAACGTCGAGAACGCTCGTCTTATGCTCGACTCGATCAAGG
CAAGCAAGAAGGCCGCAGTCAGGGGTGACTGGGACAGCCTGAGCGAGGAG
GCTCGTGCGGAGATTGAGCAGGCGGAGGATGAGTTCGTCGGACAGACCGA
GGAGGCTGTGAGCGTGATGAAGAACGTCCTCGATACCCCGGAACCTCTGC
GGAACCTGGCCGACTTGATCGCGGCGCAGCTAGAGTACCACAAGCGGTCT
TACGAGATACTCAGCGAGCTGGCTCCTGTTGTCGATGGCTTGCAGGTTGA
GCAAGAGGCCAGCTACCGTAAGAGCCGTGAGGGCGCTTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005737 | cytoplasm |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR027267 |
| DBxref | InterPro:IPR018859 |
| DBxref | InterPro:IPR004148 |
| DBxref | PFAM:PF10455 |
| DBxref | PFAM:PF03114 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:828595..829832 + |
|
