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CBS51388_001540-T1, CBS51388_001540-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001540-T1
Unique NameCBS51388_001540-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:919510..920280+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001540-T1 ID=CBS51388_001540-T1|Name=CBS51388_001540-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=771bp|location=Sequence derived from alignment at An02:919510..920280+ (Aspergillus niger CBS 513.88)
ATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAA
TGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGC
AAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTG
TTGGATTTGACAGATAGTGCGTTATACCTGTTCACTTGGCCCCCATGGGC
TTATCTCACAAATGGAGACGGGCGCAACCTGACAGTGGTTTCCAGAAAAG
CTAGTTCTAGTCCTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAG
CTGGGATCAGTTCGGTATGCGCCGCATGATAGATGAATACCGGTTGATGA
TATATATCTGACTGTGCGACTCTTGCTATGTGACTGCTGCAGCAAACCTT
GTCCTTCAGGATACCATTGAACGTCTATATGCCGGCAACCTCTACGCCGA
TATCCCGCGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCTGG
GTGAAATCGTACGCAAACCTTCCATGCATCTTCTTCGCTATTCATGTTTA
GGGCGGGGAGTTGGCTAATTGGTGTGTCTTGCTTCTCCGGGTTACAGGAT
CTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGTTCCA
GGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTTGGCG
ACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGAGCAT
AGCGGAGAGATACTGTTTTAG
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Coding sequence (CDS) from alignment at An02:919510..920280+

>CBS51388_001540-T1 ID=CBS51388_001540-T1|Name=CBS51388_001540-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2100bp|location=Sequence derived from alignment at An02:919510..920280+ (Aspergillus niger CBS 513.88)
ATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAA
TGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGC
AAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTG
TTGGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAA
GTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCAAACCTTGTCCTTC
AGGATACCATTGAACGTCTATATGCCGGCAACCTCTACGCCGATATCCCG
CGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCTGGGTGAAAT
CGATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGT
TCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTT
GGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGA
GCATAGCGGAGAGATACTGTTTTAGATGGAACGCCTTCCAATGAATGAGA
ACCCCGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAG
AACAACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCA
GATGTTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAG
TTCTAGTCCTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGG
GATCAGTTCGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGC
CGGCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTG
AGAATGTCTTGCTTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATT
CCCCCTCATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAA
GAAGGAAGACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGC
TACAGACGCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAG
ATGGAACGCCTTCCAATGAATGAGAACCCCGCCGGTGCCCACCATGGCAA
TGCGCCGCAGGGCTTTCCCCCGCAGAACAACACGCTCGGACCCATGTCGC
AAGGTCCCCCGCAATTACCGCCGCAGATGTTCACCACCGCTGCTCAGCTG
TTGGATTTGACAGATAAAAAGCTAGTTCTAGTCCTTCGAGACGGGCGGAA
GTTGATCGGAGTTTTGAGAAGCTGGGATCAGTTCGCAAACCTTGTCCTTC
AGGATACCATTGAACGTCTATATGCCGGCAACCTCTACGCCGATATCCCG
CGAGGTATATTTCTCGTCCGGGGTGAGAATGTCTTGCTTCTGGGTGAAAT
CGATCTCGACAAAGAAGATGACATTCCCCCTCATATCCAGCGCGCGTCGT
TCCAGGAAGTGTTTGAGCTGAAGAAGAAGGAAGACGGGGCTCGAAAAGTT
GGCGACAAGAAGCGCCATGGAAAGCTACAGACGCTGGGCTTTGAGCCGGA
GCATAGCGGAGAGATACTGTTTTAGATGGAACGCCTTCCAATGAATGAGA
ACCCCGCCGGTGCCCACCATGGCAATGCGCCGCAGGGCTTTCCCCCGCAG
AACAACACGCTCGGACCCATGTCGCAAGGTCCCCCGCAATTACCGCCGCA
GATGTTCACCACCGCTGCTCAGCTGTTGGATTTGACAGATAAAAAGCTAG
TTCTAGTCCTTCGAGACGGGCGGAAGTTGATCGGAGTTTTGAGAAGCTGG
GATCAGTTCGCAAACCTTGTCCTTCAGGATACCATTGAACGTCTATATGC
CGGCAACCTCTACGCCGATATCCCGCGAGGTATATTTCTCGTCCGGGGTG
AGAATGTCTTGCTTCTGGGTGAAATCGATCTCGACAAAGAAGATGACATT
CCCCCTCATATCCAGCGCGCGTCGTTCCAGGAAGTGTTTGAGCTGAAGAA
GAAGGAAGACGGGGCTCGAAAAGTTGGCGACAAGAAGCGCCATGGAAAGC
TACAGACGCTGGGCTTTGAGCCGGAGCATAGCGGAGAGATACTGTTTTAG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0000956nuclear-transcribed mRNA catabolic process
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001540CBS51388_001540Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001540-T1.exon1CBS51388_001540-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001540-T1.exon2CBS51388_001540-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001540-T1.exon3CBS51388_001540-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001540-T1.exon4CBS51388_001540-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001540-T1.cdsCBS51388_001540-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001540-T1CBS51388_001540-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR010920
DBxrefInterPro:IPR034104
DBxrefInterPro:IPR001163
DBxrefPFAM:PF01423
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:919510..920280 +
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