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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:977410..979558- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001556-T1 ID=CBS51388_001556-T1|Name=CBS51388_001556-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2149bp|location=Sequence derived from alignment at An02:977410..979558- (Aspergillus niger CBS 513.88)
ATGCCGCGAACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGTCC
GTCGTTTAATGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGCAG
GGAGACGCATCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAATT
TCGGATCCTCCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACCGA
CGCAGCCATTGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTCCG
AATCAACCTCCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGCAG
GATGATGTACGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACCAA
GCCGCCACCGGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACGTT
TAGAAAATAGACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGAGC
GCAACCCAAATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCGGA
GATGCGACATTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACGTG
GGTCGCCACAGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATGGG
ATTCCGGCTGATTCGGGGACACTTCATGCAGCATTGCAGGTATGATCTTC
GATTCCGGGAACGGGGCACTTGCTGACCCACTCGCTTCTATTTGCAGGTC
CTTGCTGTTCATCCGGATTACCTCCTACGTCAGGAGATTGTGCGCACGCT
TCGAGACCGATGGCTTCCGCTGAGCCCGGCCGGATGGCACTTTGTAGTCG
CTGGGTTGATTCGAGAGCATCAGTTCGAGCTGGCGTTGGATCATGTCGAG
CAGATGGAGAGAAAGGGCATGGTGGTCGAGAGTTGGCTGCATAGCCTACT
TATCTATTACCTTTCCGATTTTGGAGAGTTCGACGAGGTGGTCCGGTTGA
TGCGTTCACGGACAAGCCAGGGTCTGGATATGAGCTCGGAGTTGTGGTTG
CACGTGCTGGAGGTGGCGAGCGCTGCTCTTCACTACGATACTACACGGTA
CATCTGGAGACAGATGGTGGAGCTGAGATATCTTCACCCTGGTTATCCAC
TGTGCAGCAATGTCCTCAGTGTGGCGGCGCGCGCTGGAGATACTGAGCTT
GCGGCATCGGTGATCCGCTTCCTCGTTGAGGTCAACATGCAGCCCCAACT
GGATGACTACGAGAGAATGGTGGAAGCCCATGCTGTGTCGGGGTCCTTGT
ATTCTGCGTTTGAGGTGCTGTGTAAGATGCATATGGCGGACATTGCGGTA
GAAGACCGCTCTACGCGTGCCATTCTTACACATCTGCTGCAGAGTAGAAC
AACCCCACGGGGCGCATGGACAATGCTCAAACAACTGAAGGCCACCAAAC
TGACAGTCCCGCTTGGCTGCGCCAAAGTGGTGCTGGAGATGTGCGAGCAG
GAAGCCCTCGATAACCCGTCGGTGGTGGACGAGGGAATCGCGTTCTACAA
GGAACTATATGCGCTCTGTCCAGATAAGGCTGACGTTTCTGTCTACAACA
TTCTCCTCGGTATGTGTCAACGGGCGCGCAATACCGAGGCGGGCATGTTC
ATCGCAAAAGAGATGGCATCCCTTGGCGTGATTCCAGACCAAGGGACGTT
TGAACATCTCATCGTCATGTGCCTGGAAGCAGGCAATTTTGAGTCCGGGT
ACATGTACCTGCAAGATCTGCTGGGACGAGGGATCCGCCCCGGCGAGAAG
GCACGAGCCGCCATCCGTGAGCTCTGTTCTCCATCAGAAGACCCATTTGC
GTCCCGCCTCAGGCATCATCCGCAGATCCAGGATGGGTCGGTCGGATGCC
TGGTGGACGAGATCAGTAATACTCACGAGCCGCCCGATTCGACGGAGCAG
CAGCAGCAGGAGGAGGAGGAGGAAGACGGGAAGGGGGAGTCGTTTCATCG
CTCGGGACAGACACCGACCCAGACAGAGGTGGAACGGCAGGCGTTGCACA
AACTCCGACGGGCCGCGGCCAAGGAGAGACGCAAGCGAAAGCGACGATTA
GCAGCCATCGCAAAGGGGCAAGAAGAGGAGGGGTGGTTGGACTACGAGCC
AGGAGGGCTTATCCCTGAGGACCAAATCAATGCGAAGAGTAACAATTGA back to topCoding sequence (CDS) from alignment at An02:977410..979558- >CBS51388_001556-T1 ID=CBS51388_001556-T1|Name=CBS51388_001556-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4182bp|location=Sequence derived from alignment at An02:977410..979558- (Aspergillus niger CBS 513.88)
GTCCTTGCTGTTCATCCGGATTACCTCCTACGTCAGGAGATTGTGCGCAC
GCTTCGAGACCGATGGCTTCCGCTGAGCCCGGCCGGATGGCACTTTGTAG
TCGCTGGGTTGATTCGAGAGCATCAGTTCGAGCTGGCGTTGGATCATGTC
GAGCAGATGGAGAGAAAGGGCATGGTGGTCGAGAGTTGGCTGCATAGCCT
ACTTATCTATTACCTTTCCGATTTTGGAGAGTTCGACGAGGTGGTCCGGT
TGATGCGTTCACGGACAAGCCAGGGTCTGGATATGAGCTCGGAGTTGTGG
TTGCACGTGCTGGAGGTGGCGAGCGCTGCTCTTCACTACGATACTACACG
GTACATCTGGAGACAGATGGTGGAGCTGAGATATCTTCACCCTGGTTATC
CACTGTGCAGCAATGTCCTCAGTGTGGCGGCGCGCGCTGGAGATACTGAG
CTTGCGGCATCGGTGATCCGCTTCCTCGTTGAGGTCAACATGCAGCCCCA
ACTGGATGACTACGAGAGAATGGTGGAAGCCCATGCTGTGTCGGGGTCCT
TGTATTCTGCGTTTGAGGTGCTGTGTAAGATGCATATGGCGGACATTGCG
GTAGAAGACCGCTCTACGCGTGCCATTCTTACACATCTGCTGCAGAGTAG
AACAACCCCACGGGGCGCATGGACAATGCTCAAACAACTGAAGGCCACCA
AACTGACAGTCCCGCTTGGCTGCGCCAAAGTGGTGCTGGAGATGTGCGAG
CAGGAAGCCCTCGATAACCCGTCGGTGGTGGACGAGGGAATCGCGTTCTA
CAAGGAACTATATGCGCTCTGTCCAGATAAGGCTGACGTTTCTGTCTACA
ACATTCTCCTCGGTATGTGTCAACGGGCGCGCAATACCGAGGCGGGCATG
TTCATCGCAAAAGAGATGGCATCCCTTGGCGTGATTCCAGACCAAGGGAC
GTTTGAACATCTCATCGTCATGTGCCTGGAAGCAGGCAATTTTGAGTCCG
GGTACATGTACCTGCAAGATCTGCTGGGACGAGGGATCCGCCCCGGCGAG
AAGGCACGAGCCGCCATCCGTGAGCTCTGTTCTCCATCAGAAGACCCATT
TGCGTCCCGCCTCAGGCATCATCCGCAGATCCAGGATGGGTCGGTCGGAT
GCCTGGTGGACGAGATCAGTAATACTCACGAGCCGCCCGATTCGACGGAG
CAGCAGCAGCAGGAGGAGGAGGAGGAAGACGGGAAGGGGGAGTCGTTTCA
TCGCTCGGGACAGACACCGACCCAGACAGAGGTGGAACGGCAGGCGTTGC
ACAAACTCCGACGGGCCGCGGCCAAGGAGAGACGCAAGCGAAAGCGACGA
TTAGCAGCCATCGCAAAGGGGCAAGAAGAGGAGGGGTGGTTGGACTACGA
GCCAGGAGGGCTTATCCCTGAGGACCAAATCAATGCGAAGAGTAACAATT
GAATGCCGCGAACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGT
CCGTCGTTTAATGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGC
AGGGAGACGCATCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAA
TTTCGGATCCTCCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACC
GACGCAGCCATTGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTC
CGAATCAACCTCCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGC
AGGATGATGTACGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACC
AAGCCGCCACCGGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACG
TTTAGAAAATAGACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGA
GCGCAACCCAAATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCG
GAGATGCGACATTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACG
TGGGTCGCCACAGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATG
GGATTCCGGCTGATTCGGGGACACTTCATGCAGCATTGCAGGTCCTTGCT
GTTCATCCGGATTACCTCCTACGTCAGGAGATTGTGCGCACGCTTCGAGA
CCGATGGCTTCCGCTGAGCCCGGCCGGATGGCACTTTGTAGTCGCTGGGT
TGATTCGAGAGCATCAGTTCGAGCTGGCGTTGGATCATGTCGAGCAGATG
GAGAGAAAGGGCATGGTGGTCGAGAGTTGGCTGCATAGCCTACTTATCTA
TTACCTTTCCGATTTTGGAGAGTTCGACGAGGTGGTCCGGTTGATGCGTT
CACGGACAAGCCAGGGTCTGGATATGAGCTCGGAGTTGTGGTTGCACGTG
CTGGAGGTGGCGAGCGCTGCTCTTCACTACGATACTACACGGTACATCTG
GAGACAGATGGTGGAGCTGAGATATCTTCACCCTGGTTATCCACTGTGCA
GCAATGTCCTCAGTGTGGCGGCGCGCGCTGGAGATACTGAGCTTGCGGCA
TCGGTGATCCGCTTCCTCGTTGAGGTCAACATGCAGCCCCAACTGGATGA
CTACGAGAGAATGGTGGAAGCCCATGCTGTGTCGGGGTCCTTGTATTCTG
CGTTTGAGGTGCTGTGTAAGATGCATATGGCGGACATTGCGGTAGAAGAC
CGCTCTACGCGTGCCATTCTTACACATCTGCTGCAGAGTAGAACAACCCC
ACGGGGCGCATGGACAATGCTCAAACAACTGAAGGCCACCAAACTGACAG
TCCCGCTTGGCTGCGCCAAAGTGGTGCTGGAGATGTGCGAGCAGGAAGCC
CTCGATAACCCGTCGGTGGTGGACGAGGGAATCGCGTTCTACAAGGAACT
ATATGCGCTCTGTCCAGATAAGGCTGACGTTTCTGTCTACAACATTCTCC
TCGGTATGTGTCAACGGGCGCGCAATACCGAGGCGGGCATGTTCATCGCA
AAAGAGATGGCATCCCTTGGCGTGATTCCAGACCAAGGGACGTTTGAACA
TCTCATCGTCATGTGCCTGGAAGCAGGCAATTTTGAGTCCGGGTACATGT
ACCTGCAAGATCTGCTGGGACGAGGGATCCGCCCCGGCGAGAAGGCACGA
GCCGCCATCCGTGAGCTCTGTTCTCCATCAGAAGACCCATTTGCGTCCCG
CCTCAGGCATCATCCGCAGATCCAGGATGGGTCGGTCGGATGCCTGGTGG
ACGAGATCAGTAATACTCACGAGCCGCCCGATTCGACGGAGCAGCAGCAG
CAGGAGGAGGAGGAGGAAGACGGGAAGGGGGAGTCGTTTCATCGCTCGGG
ACAGACACCGACCCAGACAGAGGTGGAACGGCAGGCGTTGCACAAACTCC
GACGGGCCGCGGCCAAGGAGAGACGCAAGCGAAAGCGACGATTAGCAGCC
ATCGCAAAGGGGCAAGAAGAGGAGGGGTGGTTGGACTACGAGCCAGGAGG
GCTTATCCCTGAGGACCAAATCAATGCGAAGAGTAACAATTGAATGCCGC
GAACGACCCTGGTACTTGATGGACTGTGGTATTGTCTTTGTCCGTCGTTT
AATGCTGCAACCTTCAATCGAGTCACACCTTCCTTCACAGCAGGGAGACG
CATCCCTAAACATAATCGCATAACCGCTCTACGAAGCTCAATTTCGGATC
CTCCGCGAAGATGCCTCACCAACCTCACCCCACGACCGACCGACGCAGCC
ATTGAAATTGTCGAAGATGATACCCGCAGAAATACAGATTCCGAATCAAC
CTCCGATCAACAACCCTTCGATCCTGACGATGCAGGCGCGCAGGATGATG
TACGTCCAGGGGACCTTTTATCGCCAATGGAGCGCTTGACCAAGCCGCCA
CCGGGCGTACCCAAGTATTTCAAACACTTGCCTTCGCAACGTTTAGAAAA
TAGACTACAGGAGCGAGTAGCTCGATATCCAAGGGTTCTGAGCGCAACCC
AAATCCTGCGCGTTCTAATCCGAGACCGCCATGTTCGCCCGGAGATGCGA
CATTACCGGGGGTTAATTCTCGCCAATTCGGACCCTGAACGTGGGTCGCC
ACAGGCTGTTCGCGCGTTGCTCAAGGAGATGGAGGAGAATGGGATTCCGG
CTGATTCGGGGACACTTCATGCAGCATTGCAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR002885 |
| DBxref | InterPro:IPR011990 |
| DBxref | InterPro:IPR033443 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:977410..979558 - |
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