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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:984731..985747+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001560-T1 ID=CBS51388_001560-T1|Name=CBS51388_001560-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1017bp|location=Sequence derived from alignment at An02:984731..985747+ (Aspergillus niger CBS 513.88)
ATGTCAGTCAACAGTTCACAGCGAATAGCCTTGATCGGGTTGGGAACCAT
CGGCATATCCATGGCAGCGCTTCATCTCTCTCGTGAGAGCAACGTGGTTG
ATGTATTCGACACCCGACCGGATTTCGAAGACTATATCCACATGACACTG
CCGATCTACATGAGCGAGCTTCCATCAACGACTACTGACTCTAAACTAAG
TCCTGATTCTCATCCACCAACAATGTCATTGGTAGCGTCCCTTATCTCTT
CCGGCCGTCTGCGGATTCACTCGACTCTAGAAAGCGCGTGCGCGTCGGCC
ACCATTGTCCAGGAGCAGGGACCAGAGAACGTTGACTGGAAGCAGTCTGC
CTGGGCCCGGATTGAAGCAGTAGCCCCGCCTTCTGCCCATCTCTGGACAA
GCACATCTGGAATTGCCGCTTCCATTCAGCAAGCTAAGATGCAGGACAAG
ACTCGTCTGCTTGTTGTGCATCCGTTCAACCCACCGAATATCATGCCTCT
TCTGGAGATTGTGCCGGCTCCAGGAACCTCTGCGGAACGGGTGGAGTTTG
CTCGTGAATACTTCTCTCTACCTGGGTCAAGACATAGGCCCGTGGTCATC
CAAAAAGAGATTCCAGGATTTGTGGGCAATCGGTTGGCGTTCGCGCTACT
ACGGGAAGCTTGCTATCTGGTTCAAGAAGACGTGGTAAACGCAAAGGACC
TGGACACGATATTGATGGCTAGTCTGGGACCCAGATGGGCTGGGAATGGT
GTGTTTGAGAGTTACCAGCATGGTGGTGGAGAAGGTGGCATAGGCTCCTT
CCTGGACAAGCTTGGTGGCACCATGCAAACCGTCTGGGATGGGCAGGGGA
GAGTAAACGTGGAGGGCGACGAAAGAACGGAGTGGAAGGAAAAGGTCGTT
GCGCAAGTGAACGAAGCCTATGGAACACTGTCTGCGGAGCAAATCCAGAT
AAAGGAGGCACGATTGAAGGATATCATAGGGATCCAGACGAAGGATTACA
GCCGCGATGGACCATAA back to topCoding sequence (CDS) from alignment at An02:984731..985747+ >CBS51388_001560-T1 ID=CBS51388_001560-T1|Name=CBS51388_001560-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1017bp|location=Sequence derived from alignment at An02:984731..985747+ (Aspergillus niger CBS 513.88)
ATGTCAGTCAACAGTTCACAGCGAATAGCCTTGATCGGGTTGGGAACCAT
CGGCATATCCATGGCAGCGCTTCATCTCTCTCGTGAGAGCAACGTGGTTG
ATGTATTCGACACCCGACCGGATTTCGAAGACTATATCCACATGACACTG
CCGATCTACATGAGCGAGCTTCCATCAACGACTACTGACTCTAAACTAAG
TCCTGATTCTCATCCACCAACAATGTCATTGGTAGCGTCCCTTATCTCTT
CCGGCCGTCTGCGGATTCACTCGACTCTAGAAAGCGCGTGCGCGTCGGCC
ACCATTGTCCAGGAGCAGGGACCAGAGAACGTTGACTGGAAGCAGTCTGC
CTGGGCCCGGATTGAAGCAGTAGCCCCGCCTTCTGCCCATCTCTGGACAA
GCACATCTGGAATTGCCGCTTCCATTCAGCAAGCTAAGATGCAGGACAAG
ACTCGTCTGCTTGTTGTGCATCCGTTCAACCCACCGAATATCATGCCTCT
TCTGGAGATTGTGCCGGCTCCAGGAACCTCTGCGGAACGGGTGGAGTTTG
CTCGTGAATACTTCTCTCTACCTGGGTCAAGACATAGGCCCGTGGTCATC
CAAAAAGAGATTCCAGGATTTGTGGGCAATCGGTTGGCGTTCGCGCTACT
ACGGGAAGCTTGCTATCTGGTTCAAGAAGACGTGGTAAACGCAAAGGACC
TGGACACGATATTGATGGCTAGTCTGGGACCCAGATGGGCTGGGAATGGT
GTGTTTGAGAGTTACCAGCATGGTGGTGGAGAAGGTGGCATAGGCTCCTT
CCTGGACAAGCTTGGTGGCACCATGCAAACCGTCTGGGATGGGCAGGGGA
GAGTAAACGTGGAGGGCGACGAAAGAACGGAGTGGAAGGAAAAGGTCGTT
GCGCAAGTGAACGAAGCCTATGGAACACTGTCTGCGGAGCAAATCCAGAT
AAAGGAGGCACGATTGAAGGATATCATAGGGATCCAGACGAAGGATTACA
GCCGCGATGGACCATAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0016491 | oxidoreductase activity |
| GO:0070403 | NAD+ binding |
| GO:0003857 | 3-hydroxyacyl-CoA dehydrogenase activity |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0055114 | oxidation-reduction process |
| GO:0006631 | fatty acid metabolic process |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036291 |
| DBxref | InterPro:IPR008927 |
| DBxref | InterPro:IPR013328 |
| DBxref | InterPro:IPR006108 |
| DBxref | InterPro:IPR006176 |
| DBxref | InterPro:IPR022694 |
| DBxref | PFAM:PF02737 |
| DBxref | PFAM:PF00725 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:984731..985747 + |
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