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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1087392..1088424+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001596-T1 ID=CBS51388_001596-T1|Name=CBS51388_001596-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1033bp|location=Sequence derived from alignment at An02:1087392..1088424+ (Aspergillus niger CBS 513.88)
ATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCA
GTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCA
CCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGC
ACCTATGCCACCGCTCTGGTATGCGACACCATGATTCTACCCGTTGGTTG
CTAGTAGTGGCTCTGAGGTTCTCGCCCAGTCAATGGCACGGAAGAAAGGA
AGAAAACAAGAAAGAGGGGGAAAAGGCGGACGGGAGACCTAAGAAAACAA
AAACAGAGATTCACACGTCCTAGCAACCTCATGATCCCAGAAATGGCCAA
CTTCAAGAAAGCTCCCTGGCTAACCGATTGTTTGCGTTTCTGTGTATAGT
ACACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTC
GCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCT
CTCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGC
TGCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTC
AACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGCGA
GAAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACA
TCACCAGTGCTCAGGTACTTTCTTCTTTCGGGTTTTCGTATCGTGGGGCT
TTATACTGATTGTTGGGAAACAGGAGCTCGACACCAAGACTGTCAACCGT
CTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAA
GGTTGTCACCAAGGTAATTACTAATTCTTTCCCCAATTGACGCTACGTAT
ACTCATATGTTCAAATCAGGTCGACCCCGAGCTCGTCGGTGGCCTGGTCG
TTGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGATTGCC
AAGCTCAACAAGGCCCTCACCGACGCTTTGTAA back to topCoding sequence (CDS) from alignment at An02:1087392..1088424+ >CBS51388_001596-T1 ID=CBS51388_001596-T1|Name=CBS51388_001596-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2748bp|location=Sequence derived from alignment at An02:1087392..1088424+ (Aspergillus niger CBS 513.88)
ATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCA
GTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCA
CCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGC
ACCTATGCCACCGCTCTGTACACTGCCTCTGCCAAGTCCGCCAACCTCGA
CCAGACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACC
GCAAGCTGATCACCATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAG
CAGCAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGA
CATCCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTC
TCCTCGAGGGTATCTGCGAGAAGTTCTCCACTCTCATGGGTGCTCACCGT
GGTGAGATCGAGCTGAACATCACCAGTGCTCAGGAGCTCGACACCAAGAC
TGTCAACCGTCTCGAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCA
AGAAGCTCAAGGTTGTCACCAAGGTCGACCCCGAGCTCGTCGGTGGCCTG
GTCGTTGAGATCGGTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGAT
TGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTAAATGTTCTCCGTTC
GTGTCGCCCGCGCCGGCCTCCGTGCCACCGCCCAGCAGTTCTCCGTTCCT
CGCACTGCCGCCGTCAACGGTCTGAGGACCTATGCCACCCCGGCCCAGGA
TGTCAAGCCTCCTGTCTCCCTGTTCGGTGTTGACGGCACCTATGCCACCG
CTCTGTACACTGCCTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAG
GCTCTCGCCAGCCTCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCAC
CATCCTCTCCGCCCCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCC
AGGAGCTGCAGAAGGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAAC
TTCCTCAACACTCTGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTAT
CTGCGAGAAGTTCTCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGC
TGAACATCACCAGTGCTCAGGAGCTCGACACCAAGACTGTCAACCGTCTC
GAGAAGGCTGTTTCCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAAGGT
TGTCACCAAGGTCGACCCCGAGCTCGTCGGTGGCCTGGTCGTTGAGATCG
GTGACCGCACCATTGACCTCAGCGTCTCCTCCAAGATTGCCAAGCTCAAC
AAGGCCCTCACCGACGCTTTGTAAATGTTCTCCGTTCGTGTCGCCCGCGC
CGGCCTCCGTGCCACCGCCCAGCAGTTCTCCGTTCCTCGCACTGCCGCCG
TCAACGGTCTGAGGACCTATGCCACCCCGGCCCAGGATGTCAAGCCTCCT
GTCTCCCTGTTCGGTGTTGACGGCACCTATGCCACCGCTCTGTACACTGC
CTCTGCCAAGTCCGCCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCC
TCGGTCAGACCCTCAAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCC
CCTACCCTCACTGTCGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAA
GGTTGCTGGTGCCGACAAGGGCGACATCCTCAAGAACTTCCTCAACACTC
TGGCTGAGAACAACCGTCTCGGTCTCCTCGAGGGTATCTGCGAGAAGTTC
TCCACTCTCATGGGTGCTCACCGTGGTGAGATCGAGCTGAACATCACCAG
TGCTCAGGAGCTCGACACCAAGACTGTCAACCGTCTCGAGAAGGCTGTTT
CCAAGTCTGAGTTCAGCCAGGGCAAGAAGCTCAAGGTTGTCACCAAGGTC
GACCCCGAGCTCGTCGGTGGCCTGGTCGTTGAGATCGGTGACCGCACCAT
TGACCTCAGCGTCTCCTCCAAGATTGCCAAGCTCAACAAGGCCCTCACCG
ACGCTTTGTAAATGTTCTCCGTTCGTGTCGCCCGCGCCGGCCTCCGTGCC
ACCGCCCAGCAGTTCTCCGTTCCTCGCACTGCCGCCGTCAACGGTCTGAG
GACCTATGCCACCCCGGCCCAGGATGTCAAGCCTCCTGTCTCCCTGTTCG
GTGTTGACGGCACCTATGCCACCGCTCTGTACACTGCCTCTGCCAAGTCC
GCCAACCTCGACCAGACCTCCAAGGCTCTCGCCAGCCTCGGTCAGACCCT
CAAGGCCGACCGCAAGCTGATCACCATCCTCTCCGCCCCTACCCTCACTG
TCGCCGACAAGCAGCAGATTGTCCAGGAGCTGCAGAAGGTTGCTGGTGCC
GACAAGGGCGACATCCTCAAGAACTTCCTCAACACTCTGGCTGAGAACAA
CCGTCTCGGTCTCCTCGAGGGTATCTGCGAGAAGTTCTCCACTCTCATGG
GTGCTCACCGTGGTGAGATCGAGCTGAACATCACCAGTGCTCAGGAGCTC
GACACCAAGACTGTCAACCGTCTCGAGAAGGCTGTTTCCAAGTCTGAGTT
CAGCCAGGGCAAGAAGCTCAAGGTTGTCACCAAGGTCGACCCCGAGCTCG
TCGGTGGCCTGGTCGTTGAGATCGGTGACCGCACCATTGACCTCAGCGTC
TCCTCCAAGATTGCCAAGCTCAACAAGGCCCTCACCGACGCTTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0046933 | proton-transporting ATP synthase activity, rotational mechanism |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0015986 | ATP synthesis coupled proton transport |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09264KDO |
| DBxref | InterPro:IPR020781 |
| DBxref | InterPro:IPR026015 |
| DBxref | InterPro:IPR000711 |
| DBxref | PFAM:PF00213 |
| Product | ATP synthase F0 subcomplex subunit OSCP atp5 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1087392..1088424 + |
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