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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1109291..1110678- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001603-T1 ID=CBS51388_001603-T1|Name=CBS51388_001603-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1388bp|location=Sequence derived from alignment at An02:1109291..1110678- (Aspergillus niger CBS 513.88)
ATGAACGGCATACCTGAAGACTCGGCGCCATCGAGCGCCCCCTTGCGACA
GCCCAAGAAGAGGTTCGTCGGTCGTCGGACAGCAGACGCGCAAGCTCAGA
AGGATGCATCATCCACCGCACAAAATGTCGAGACTACCAGTATACAAAAG
GGTCAGTAGCCCTCTCACAGCCAATATTACATGCACTCACAACTTTCATG
TATAATTCTCAACTAACGTCTTATTCAAAAACAGCCACCCCCCGCCGCAC
CCCCCGCACCCTAAACCAAGTCCCTCCCGAAATTCTCGAAGATCCGGAAA
TCCTCGCCGCCATCGAACTCCTCCCACGCAACTACTCCTTCGAGATCCCC
AAGACCATCCACCGCATCCGCACCTCGGGCGCCAAACGCGTGGCACTCCA
ATTCCCCGAAGGCCTCCTCATCTTCGCCACAACCATATCCGACATCCTGA
CTCAATTCTGCCCGGGCATCGAAACCCTGATCATGGGCGACGTGACCTAC
GGCGCCTGCTGCATCGACGACTACACAGCGCGCGCACTTGGCTGCGACCT
CCTTGTCCACTACGCACACAGCTGCCTGATCCCCGTAGACGTGACCAAGA
TCAAGACCCTCTACATCTTCGTCGATATCAGCATCGACACCACACACCTA
ATCGCCACGCTAGAACGCAACTTCCAACCCGGAAAAACGATCGCCACAGT
CGGCACGATCCAATTCAACGCTACCCTCCACGGACTGAAACCCGTTCTCG
AGCGCGCCGGCTTCAAGGTCCTCATCCCGCAGATCATGCCTCTCTCCAAG
GGAGAAATCCTGGGATGTACCTCCCCGACCCTCTCCGCCGACGAAGTTGA
TATCCTCCTGTACCTCGGCGACGGCCGCTTCCACCTCGAGTCCGCGATGA
TTCATAACCCGGCTATCCCGGCGTACCGGTATGATCCGTACTCGAGGACG
TTGTCCCGGGAGACGTATGTTCACGACGAAATGCACACGCTGCGCCGGGA
TGCGATTAACACGGCGAAGTCGGCGAAGAAGTGGGGGATTATTCTGGGTT
CGTTGGGACGACAGGGAAACCCTAATACGATGGCGATGATTGAGAGGCAT
TTGAATGAGAGGGGCATTCCATTTGTTAATCTCCTCCTGAGTGAGATTTT
CCCGGGAAAGTTGGCGTCCATGGGGGATGTGGAATGCTGGGTGCAGATTG
CTTGTCCGCGGTTGAGTATTGATTGGGGGTATGCGTTTGCGAGGCCGCTG
TTGACGCCGTATGAGGCGTTGATTGCGTTGGGGGTGAGAGAGGGGTGGGA
GACGGAGAATAATGGGGTTTATCCTATGGACTTTTATGCGAAGGAGGGGC
TGGGGAGGACAAAGCCGGGCCAAGCGATTGCGACGTGA back to topCoding sequence (CDS) from alignment at An02:1109291..1110678- >CBS51388_001603-T1 ID=CBS51388_001603-T1|Name=CBS51388_001603-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2610bp|location=Sequence derived from alignment at An02:1109291..1110678- (Aspergillus niger CBS 513.88)
CCACCCCCCGCCGCACCCCCCGCACCCTAAACCAAGTCCCTCCCGAAATT
CTCGAAGATCCGGAAATCCTCGCCGCCATCGAACTCCTCCCACGCAACTA
CTCCTTCGAGATCCCCAAGACCATCCACCGCATCCGCACCTCGGGCGCCA
AACGCGTGGCACTCCAATTCCCCGAAGGCCTCCTCATCTTCGCCACAACC
ATATCCGACATCCTGACTCAATTCTGCCCGGGCATCGAAACCCTGATCAT
GGGCGACGTGACCTACGGCGCCTGCTGCATCGACGACTACACAGCGCGCG
CACTTGGCTGCGACCTCCTTGTCCACTACGCACACAGCTGCCTGATCCCC
GTAGACGTGACCAAGATCAAGACCCTCTACATCTTCGTCGATATCAGCAT
CGACACCACACACCTAATCGCCACGCTAGAACGCAACTTCCAACCCGGAA
AAACGATCGCCACAGTCGGCACGATCCAATTCAACGCTACCCTCCACGGA
CTGAAACCCGTTCTCGAGCGCGCCGGCTTCAAGGTCCTCATCCCGCAGAT
CATGCCTCTCTCCAAGGGAGAAATCCTGGGATGTACCTCCCCGACCCTCT
CCGCCGACGAAGTTGATATCCTCCTGTACCTCGGCGACGGCCGCTTCCAC
CTCGAGTCCGCGATGATTCATAACCCGGCTATCCCGGCGTACCGGTATGA
TCCGTACTCGAGGACGTTGTCCCGGGAGACGTATGTTCACGACGAAATGC
ACACGCTGCGCCGGGATGCGATTAACACGGCGAAGTCGGCGAAGAAGTGG
GGGATTATTCTGGGTTCGTTGGGACGACAGGGAAACCCTAATACGATGGC
GATGATTGAGAGGCATTTGAATGAGAGGGGCATTCCATTTGTTAATCTCC
TCCTGAGTGAGATTTTCCCGGGAAAGTTGGCGTCCATGGGGGATGTGGAA
TGCTGGGTGCAGATTGCTTGTCCGCGGTTGAGTATTGATTGGGGGTATGC
GTTTGCGAGGCCGCTGTTGACGCCGTATGAGGCGTTGATTGCGTTGGGGG
TGAGAGAGGGGTGGGAGACGGAGAATAATGGGGTTTATCCTATGGACTTT
TATGCGAAGGAGGGGCTGGGGAGGACAAAGCCGGGCCAAGCGATTGCGAC
GTGAATGAACGGCATACCTGAAGACTCGGCGCCATCGAGCGCCCCCTTGC
GACAGCCCAAGAAGAGGTTCGTCGGTCGTCGGACAGCAGACGCGCAAGCT
CAGAAGGATGCATCATCCACCGCACAAAATGTCGAGACTACCAGTATACA
AAAGGCCACCCCCCGCCGCACCCCCCGCACCCTAAACCAAGTCCCTCCCG
AAATTCTCGAAGATCCGGAAATCCTCGCCGCCATCGAACTCCTCCCACGC
AACTACTCCTTCGAGATCCCCAAGACCATCCACCGCATCCGCACCTCGGG
CGCCAAACGCGTGGCACTCCAATTCCCCGAAGGCCTCCTCATCTTCGCCA
CAACCATATCCGACATCCTGACTCAATTCTGCCCGGGCATCGAAACCCTG
ATCATGGGCGACGTGACCTACGGCGCCTGCTGCATCGACGACTACACAGC
GCGCGCACTTGGCTGCGACCTCCTTGTCCACTACGCACACAGCTGCCTGA
TCCCCGTAGACGTGACCAAGATCAAGACCCTCTACATCTTCGTCGATATC
AGCATCGACACCACACACCTAATCGCCACGCTAGAACGCAACTTCCAACC
CGGAAAAACGATCGCCACAGTCGGCACGATCCAATTCAACGCTACCCTCC
ACGGACTGAAACCCGTTCTCGAGCGCGCCGGCTTCAAGGTCCTCATCCCG
CAGATCATGCCTCTCTCCAAGGGAGAAATCCTGGGATGTACCTCCCCGAC
CCTCTCCGCCGACGAAGTTGATATCCTCCTGTACCTCGGCGACGGCCGCT
TCCACCTCGAGTCCGCGATGATTCATAACCCGGCTATCCCGGCGTACCGG
TATGATCCGTACTCGAGGACGTTGTCCCGGGAGACGTATGTTCACGACGA
AATGCACACGCTGCGCCGGGATGCGATTAACACGGCGAAGTCGGCGAAGA
AGTGGGGGATTATTCTGGGTTCGTTGGGACGACAGGGAAACCCTAATACG
ATGGCGATGATTGAGAGGCATTTGAATGAGAGGGGCATTCCATTTGTTAA
TCTCCTCCTGAGTGAGATTTTCCCGGGAAAGTTGGCGTCCATGGGGGATG
TGGAATGCTGGGTGCAGATTGCTTGTCCGCGGTTGAGTATTGATTGGGGG
TATGCGTTTGCGAGGCCGCTGTTGACGCCGTATGAGGCGTTGATTGCGTT
GGGGGTGAGAGAGGGGTGGGAGACGGAGAATAATGGGGTTTATCCTATGG
ACTTTTATGCGAAGGAGGGGCTGGGGAGGACAAAGCCGGGCCAAGCGATT
GCGACGTGAATGAACGGCATACCTGAAGACTCGGCGCCATCGAGCGCCCC
CTTGCGACAGCCCAAGAAGAGGTTCGTCGGTCGTCGGACAGCAGACGCGC
AAGCTCAGAAGGATGCATCATCCACCGCACAAAATGTCGAGACTACCAGT
ATACAAAAGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0017183 | peptidyl-diphthamide biosynthetic process from peptidyl-histidine |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09261X9E |
| DBxref | InterPro:IPR042264 |
| DBxref | InterPro:IPR035435 |
| DBxref | InterPro:IPR016435 |
| DBxref | InterPro:IPR042265 |
| DBxref | InterPro:IPR042263 |
| DBxref | PFAM:PF01866 |
| Product | Diphthamide biosynthesis protein 1 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1109291..1110678 - |
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