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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1115819..1116754+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001607-T1 ID=CBS51388_001607-T1|Name=CBS51388_001607-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=936bp|location=Sequence derived from alignment at An02:1115819..1116754+ (Aspergillus niger CBS 513.88)
ATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCCCC
GTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTATTTCATG
GCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGTAAGCCGTTG
GCCGTCTTGTAGACACCGCGAACTGATAAGAACTACTCGTGGCTCACTGA
CCGGCATGCGTGACTCGCAACAGGATTGATCAACAATGTCCTCTATGTTA
TCATTTTGTCCGCAGCCCTCGATTTAGTTGGTCCTAGTGTCCCCAAGGGC
GTCGTTCTTCTCGCAGACGTCATTCCCTCATTCGGAACCAAGCTGATAGC
ACCCTACTTTATTCATTTGGTTCCATATCCGGCTCGAGTATTGTTCTGTG
TGCTATGTTCAGCCGTGGGTATGCTTCTGGTGGCCCTGAGCCCAGCGTAT
ACAGATGGCGGTTCAATTTCCACCAAAATCGCGGGCATTATTCTGGCGAG
CTTGTCGAGCGGAGGAGGCGAACTGAGCTTCCTAGCACTGACGCACTTCT
ACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGTGGTACCGGAGCCGCCGGG
CTGGTCGGGGCTGGTGCGTACGCCGTCGCAACTACCTCTATGGGGCTCAG
TGTCAGGTCGACACTCCTAGCAGCTGCCTGCCTGCCAGCAATCATGGTTG
TGAGCTTCTTCGCCATTCTGCCAAGAGCTCCCATACGGACATTGGCCGCT
GCACCTGTTGAGTATCGTGCAATTGACCAGGAAGATCGGGATGACCTTCT
GGATGAGCGGCACGGTCTACTCGGCTCCTCAGCTCCCCCGAGCCGAAACA
AGAGGAGCGACGCGAGTCATGAGCTCGGCTTGCAGGTGTTCAAAGCTAAC
CTGCAGCGAGCTAGGGGACTTTTCTTTCCCTTGTAA back to topCoding sequence (CDS) from alignment at An02:1115819..1116754+ >CBS51388_001607-T1 ID=CBS51388_001607-T1|Name=CBS51388_001607-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1704bp|location=Sequence derived from alignment at An02:1115819..1116754+ (Aspergillus niger CBS 513.88)
ATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCCCC
GTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTATTTCATG
GCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGATTGATCAAC
AATGTCCTCTATGTTATCATTTTGTCCGCAGCCCTCGATTTAGTTGGTCC
TAGTGTCCCCAAGGGCGTCGTTCTTCTCGCAGACGTCATTCCCTCATTCG
GAACCAAGCTGATAGCACCCTACTTTATTCATTTGGTTCCATATCCGGCT
CGAGTATTGTTCTGTGTGCTATGTTCAGCCGTGGGTATGCTTCTGGTGGC
CCTGAGCCCAGCGTATACAGATGGCGGTTCAATTTCCACCAAAATCGCGG
GCATTATTCTGGCGAGCTTGTCGAGCGGAGGAGGCGAACTGAGCTTCCTA
GCACTGACGCACTTCTACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGTGG
TACCGGAGCCGCCGGGCTGGTCGGGGCTGGTGCGTACGCCGTCGCAACTA
CCTCTATGGGGCTCAGTGTCAGGTCGACACTCCTAGCAGCTGCCTGCCTG
CCAGCAATCATGGTTGTGAGCTTCTTCGCCATTCTGCCAAGAGCTCCCAT
ACGGACATTGGCCGCTGCACCTGTTGAGTATCGTGCAATTGACCAGGAAG
ATCGGGATGACCTTCTGGATGAGCGGCACGGTCTACTCGGCTCCTCAGCT
CCCCCGAGCCGAAACAAGAGGAGCGACGCGAGTCATGAGCTCGGCTTGCA
GGTGTTCAAAGCTAACCTGCAGCGAGCTAGGGGACTTTTCTTTCCCTTGT
AAATGTCTTCTGCTCCTGACGGGCAACCAATGCTGCCTCTTCCTGGAGCC
CCGTCTTCTTCATGGTCCCGATTTCGTGAGAGATTCGGTGCACTATTTCA
TGGCGCTGACCCCAGAGTCTGTGTTGCATTCTGGCTACTTGGATTGATCA
ACAATGTCCTCTATGTTATCATTTTGTCCGCAGCCCTCGATTTAGTTGGT
CCTAGTGTCCCCAAGGGCGTCGTTCTTCTCGCAGACGTCATTCCCTCATT
CGGAACCAAGCTGATAGCACCCTACTTTATTCATTTGGTTCCATATCCGG
CTCGAGTATTGTTCTGTGTGCTATGTTCAGCCGTGGGTATGCTTCTGGTG
GCCCTGAGCCCAGCGTATACAGATGGCGGTTCAATTTCCACCAAAATCGC
GGGCATTATTCTGGCGAGCTTGTCGAGCGGAGGAGGCGAACTGAGCTTCC
TAGCACTGACGCACTTCTACGGCCCGTTCAGTCTGGCAGCCTGGGGTAGT
GGTACCGGAGCCGCCGGGCTGGTCGGGGCTGGTGCGTACGCCGTCGCAAC
TACCTCTATGGGGCTCAGTGTCAGGTCGACACTCCTAGCAGCTGCCTGCC
TGCCAGCAATCATGGTTGTGAGCTTCTTCGCCATTCTGCCAAGAGCTCCC
ATACGGACATTGGCCGCTGCACCTGTTGAGTATCGTGCAATTGACCAGGA
AGATCGGGATGACCTTCTGGATGAGCGGCACGGTCTACTCGGCTCCTCAG
CTCCCCCGAGCCGAAACAAGAGGAGCGACGCGAGTCATGAGCTCGGCTTG
CAGGTGTTCAAAGCTAACCTGCAGCGAGCTAGGGGACTTTTCTTTCCCTT
GTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0016020 | membrane |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036259 |
| DBxref | InterPro:IPR003492 |
| DBxref | PFAM:PF02487 |
| Product | battenin CLN3 protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1115819..1116754 + |
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