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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1141225..1143350- Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001616-T1 ID=CBS51388_001616-T1|Name=CBS51388_001616-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2126bp|location=Sequence derived from alignment at An02:1141225..1143350- (Aspergillus niger CBS 513.88)
ATGGAAAGCACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCC
CTTCACATCGATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATG
CTGATGCCGACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACA
GCAACTTCGGCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAA
GCACGTTCCCGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTG
CCGCCTTGAGCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGAC
CGTAAGTGCCGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACG
GGTATGTCTTCTACCAATATCATCCGAAGGACCAAGCAGAAAATGTCTGC
CATTTATGATCGTGGACTAACGGGTACCCAGGAGTTGGAGTCGCTCCCTC
AGAGTGATCAGCAGGGCATTGCGCATGTTTGGTCGCTCTTCTCAGCCGCC
CCAGCCAAGCACCGAAAACTCATACTCCAGGGAATTATGGCTCAATGCTG
CTTCCCGCAACTCTCGTTCATTTCCACCACCGTCCGTGACCTCATCCGAA
TCGATTTCATTGCCGCTCTTCCTCCGGAGATCTCTTTCAAAATCCTGTGT
TACCTGGACACCACTTCTCTTTGCAAAGCTGCACAAGTCTCGCGACGTTG
GAGGGCACTGGCCGACGACGACGTGGTCTGGCATCGCATGTGCGAGCAAC
ATATTCATCGCAAGTGCAAGAAATGTGGCTGGGGACTTCCCCTTTTGGAT
CGGAAGAGGCTCCGTGAATCGAAGCGCGAGATTGAGATTCGCGCTACGAC
CTGGGACGTCAACGGCACGTCTCCGAAAGCGACTCCTGCGCTCCCTGAAG
ATGCTTCGCCTGTCGCCGACAGCTCTGGTACCGGTAAACGAAAGCCTGAG
CCAAGCGAGGAAGAGACTGCGGTCGTCAAACGCCACTGTCAGTCACTAGC
GATGCGCCCAGAAGGAAGCGAAGATTATTTCAAAACCCGATACAGGCCTT
GGAAGGAGGTGTACAAGGATCGTTTCAAAGTGGGCACAAACTGGAAGTAC
GGACGCTGTTCGATCAGAATCTTCAAAGGCCATACGAATGGCGTGATGTG
CTTGCAATTCGAGGACAACATCCTGGCAACCGGATCTTACGACGCGACGA
TTAAGATTTGGGATACCGACACTGGCCAGGAAATTCGTACTCTTCGGGGA
CACGAGTCGGGTATCCGCTGCCTGCAGTTTGATGACACGAAGTTGATCAG
TGGTAGTATGGATGGCAGCGTGAAAGTCTGGAACTGGCGCACTGGCGATT
GCATTTCCACGTATACTGGTCATCGTGGCGGAGTAATCGGGCTGCACTTC
GATGCTACTATTCTCGCGTCCGCATCTGTTGATAAGACCGTGAAGATCTG
GAATTTCGAGGACAAATCAACTTGCCTCTTACGAGGACACACGGACTGGG
TCAACGCGGTCCGGGTCGATACGGCTTCTCGCACGGTGTTCTCGGCGTCC
GACGACTGCACCGTTCGGCTTTGGGATTTGGATACCAAGTCTTGCATTCG
GACATTCCATGGCCATGTGGGACAGGTTCAACAAGTGGTTCCTCTTCCCC
GGGAATTTGAATTTGAAGAGCATGATGTTGAGTGTGAGAACGACAACCTC
AGCACTGTCTCCGGCGACACCGAGCCGGCATCTCTTCAGGCCACGCTTGG
CCTCGAGTCGAATGCGGTTATTTCTCAGAGTTCACCGTTTGGTCCTTCTT
TTGAGTCAGGCCGGACAGCACCACCGCGCTACATTGTTACTAGCGCCTTG
GACTCGACCATCCGTTTATGGGAGACTAGCACTGGCCGGTGCTTGCGTAC
GTTCTTTGGCCATCTGGAGGGTGTCTGGGCCCTGGCAGCGGATACACTGC
GTATTGTTTCTGGGGCCGAGGACCGGATGATCAAGATCTGGGATCCGCGA
ACCGGCAAGTGTGAGCGCACGTTCACCGGCCACTCCGGCCCTGTCACCTG
CATCGGACTTGGCGACAGTCGGTTTGCTACTGGTAGTGAGGACTGCGAAG
TGCGCATGTACAGCTTTCAGAGCTGA back to topCoding sequence (CDS) from alignment at An02:1141225..1143350- >CBS51388_001616-T1 ID=CBS51388_001616-T1|Name=CBS51388_001616-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=4092bp|location=Sequence derived from alignment at An02:1141225..1143350- (Aspergillus niger CBS 513.88)
GAGTTGGAGTCGCTCCCTCAGAGTGATCAGCAGGGCATTGCGCATGTTTG
GTCGCTCTTCTCAGCCGCCCCAGCCAAGCACCGAAAACTCATACTCCAGG
GAATTATGGCTCAATGCTGCTTCCCGCAACTCTCGTTCATTTCCACCACC
GTCCGTGACCTCATCCGAATCGATTTCATTGCCGCTCTTCCTCCGGAGAT
CTCTTTCAAAATCCTGTGTTACCTGGACACCACTTCTCTTTGCAAAGCTG
CACAAGTCTCGCGACGTTGGAGGGCACTGGCCGACGACGACGTGGTCTGG
CATCGCATGTGCGAGCAACATATTCATCGCAAGTGCAAGAAATGTGGCTG
GGGACTTCCCCTTTTGGATCGGAAGAGGCTCCGTGAATCGAAGCGCGAGA
TTGAGATTCGCGCTACGACCTGGGACGTCAACGGCACGTCTCCGAAAGCG
ACTCCTGCGCTCCCTGAAGATGCTTCGCCTGTCGCCGACAGCTCTGGTAC
CGGTAAACGAAAGCCTGAGCCAAGCGAGGAAGAGACTGCGGTCGTCAAAC
GCCACTGTCAGTCACTAGCGATGCGCCCAGAAGGAAGCGAAGATTATTTC
AAAACCCGATACAGGCCTTGGAAGGAGGTGTACAAGGATCGTTTCAAAGT
GGGCACAAACTGGAAGTACGGACGCTGTTCGATCAGAATCTTCAAAGGCC
ATACGAATGGCGTGATGTGCTTGCAATTCGAGGACAACATCCTGGCAACC
GGATCTTACGACGCGACGATTAAGATTTGGGATACCGACACTGGCCAGGA
AATTCGTACTCTTCGGGGACACGAGTCGGGTATCCGCTGCCTGCAGTTTG
ATGACACGAAGTTGATCAGTGGTAGTATGGATGGCAGCGTGAAAGTCTGG
AACTGGCGCACTGGCGATTGCATTTCCACGTATACTGGTCATCGTGGCGG
AGTAATCGGGCTGCACTTCGATGCTACTATTCTCGCGTCCGCATCTGTTG
ATAAGACCGTGAAGATCTGGAATTTCGAGGACAAATCAACTTGCCTCTTA
CGAGGACACACGGACTGGGTCAACGCGGTCCGGGTCGATACGGCTTCTCG
CACGGTGTTCTCGGCGTCCGACGACTGCACCGTTCGGCTTTGGGATTTGG
ATACCAAGTCTTGCATTCGGACATTCCATGGCCATGTGGGACAGGTTCAA
CAAGTGGTTCCTCTTCCCCGGGAATTTGAATTTGAAGAGCATGATGTTGA
GTGTGAGAACGACAACCTCAGCACTGTCTCCGGCGACACCGAGCCGGCAT
CTCTTCAGGCCACGCTTGGCCTCGAGTCGAATGCGGTTATTTCTCAGAGT
TCACCGTTTGGTCCTTCTTTTGAGTCAGGCCGGACAGCACCACCGCGCTA
CATTGTTACTAGCGCCTTGGACTCGACCATCCGTTTATGGGAGACTAGCA
CTGGCCGGTGCTTGCGTACGTTCTTTGGCCATCTGGAGGGTGTCTGGGCC
CTGGCAGCGGATACACTGCGTATTGTTTCTGGGGCCGAGGACCGGATGAT
CAAGATCTGGGATCCGCGAACCGGCAAGTGTGAGCGCACGTTCACCGGCC
ACTCCGGCCCTGTCACCTGCATCGGACTTGGCGACAGTCGGTTTGCTACT
GGTAGTGAGGACTGCGAAGTGCGCATGTACAGCTTTCAGAGCTGAATGGA
AAGCACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCCCTTCA
CATCGATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATGCTGAT
GCCGACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACAGCAAC
TTCGGCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAAGCACG
TTCCCGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTGCCGCC
TTGAGCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGACCGTAA
GTGCCGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACGGGAGT
TGGAGTCGCTCCCTCAGAGTGATCAGCAGGGCATTGCGCATGTTTGGTCG
CTCTTCTCAGCCGCCCCAGCCAAGCACCGAAAACTCATACTCCAGGGAAT
TATGGCTCAATGCTGCTTCCCGCAACTCTCGTTCATTTCCACCACCGTCC
GTGACCTCATCCGAATCGATTTCATTGCCGCTCTTCCTCCGGAGATCTCT
TTCAAAATCCTGTGTTACCTGGACACCACTTCTCTTTGCAAAGCTGCACA
AGTCTCGCGACGTTGGAGGGCACTGGCCGACGACGACGTGGTCTGGCATC
GCATGTGCGAGCAACATATTCATCGCAAGTGCAAGAAATGTGGCTGGGGA
CTTCCCCTTTTGGATCGGAAGAGGCTCCGTGAATCGAAGCGCGAGATTGA
GATTCGCGCTACGACCTGGGACGTCAACGGCACGTCTCCGAAAGCGACTC
CTGCGCTCCCTGAAGATGCTTCGCCTGTCGCCGACAGCTCTGGTACCGGT
AAACGAAAGCCTGAGCCAAGCGAGGAAGAGACTGCGGTCGTCAAACGCCA
CTGTCAGTCACTAGCGATGCGCCCAGAAGGAAGCGAAGATTATTTCAAAA
CCCGATACAGGCCTTGGAAGGAGGTGTACAAGGATCGTTTCAAAGTGGGC
ACAAACTGGAAGTACGGACGCTGTTCGATCAGAATCTTCAAAGGCCATAC
GAATGGCGTGATGTGCTTGCAATTCGAGGACAACATCCTGGCAACCGGAT
CTTACGACGCGACGATTAAGATTTGGGATACCGACACTGGCCAGGAAATT
CGTACTCTTCGGGGACACGAGTCGGGTATCCGCTGCCTGCAGTTTGATGA
CACGAAGTTGATCAGTGGTAGTATGGATGGCAGCGTGAAAGTCTGGAACT
GGCGCACTGGCGATTGCATTTCCACGTATACTGGTCATCGTGGCGGAGTA
ATCGGGCTGCACTTCGATGCTACTATTCTCGCGTCCGCATCTGTTGATAA
GACCGTGAAGATCTGGAATTTCGAGGACAAATCAACTTGCCTCTTACGAG
GACACACGGACTGGGTCAACGCGGTCCGGGTCGATACGGCTTCTCGCACG
GTGTTCTCGGCGTCCGACGACTGCACCGTTCGGCTTTGGGATTTGGATAC
CAAGTCTTGCATTCGGACATTCCATGGCCATGTGGGACAGGTTCAACAAG
TGGTTCCTCTTCCCCGGGAATTTGAATTTGAAGAGCATGATGTTGAGTGT
GAGAACGACAACCTCAGCACTGTCTCCGGCGACACCGAGCCGGCATCTCT
TCAGGCCACGCTTGGCCTCGAGTCGAATGCGGTTATTTCTCAGAGTTCAC
CGTTTGGTCCTTCTTTTGAGTCAGGCCGGACAGCACCACCGCGCTACATT
GTTACTAGCGCCTTGGACTCGACCATCCGTTTATGGGAGACTAGCACTGG
CCGGTGCTTGCGTACGTTCTTTGGCCATCTGGAGGGTGTCTGGGCCCTGG
CAGCGGATACACTGCGTATTGTTTCTGGGGCCGAGGACCGGATGATCAAG
ATCTGGGATCCGCGAACCGGCAAGTGTGAGCGCACGTTCACCGGCCACTC
CGGCCCTGTCACCTGCATCGGACTTGGCGACAGTCGGTTTGCTACTGGTA
GTGAGGACTGCGAAGTGCGCATGTACAGCTTTCAGAGCTGAATGGAAAGC
ACACGGCCTCAGGAGGACAAAACCATGTCCTCCCCTCCGCCCTTCACATC
GATCTTCGGTGGCCCCGCCGAGTCCGCGGAGGAGATCGATGCTGATGCCG
ACAATAGCCAGCTGAAGCCCCACAATCGCAGCAACGTAACAGCAACTTCG
GCCAAGCTCGTGGGCAAAAGTGTCGCCCCTTTCCTCGCAAAGCACGTTCC
CGACCAATACGCCCCCCTCGGATCGCAAAATAGAGAACCTGCCGCCTTGA
GCAGCGCAAATTCCCGCTATTGCTACCGACATCGCCCAGACCGTAAGTGC
CGCCGGCAGGCCGACGAACCGACAATGGACAAATTGCAACGG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0005515 | protein binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Properties
| Property Name | Value |
|---|
| Note | BUSCO:EOG09260KIY |
| DBxref | InterPro:IPR036047 |
| DBxref | InterPro:IPR036322 |
| DBxref | InterPro:IPR017986 |
| DBxref | InterPro:IPR019775 |
| DBxref | InterPro:IPR015943 |
| DBxref | InterPro:IPR001680 |
| DBxref | InterPro:IPR001810 |
| DBxref | InterPro:IPR020472 |
| DBxref | PFAM:PF00400 |
| DBxref | PFAM:PF12937 |
| DBxref | PFAM:PF00646 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1141225..1143350 - |
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