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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1144920..1146560+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001617-T1 ID=CBS51388_001617-T1|Name=CBS51388_001617-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1641bp|location=Sequence derived from alignment at An02:1144920..1146560+ (Aspergillus niger CBS 513.88)
ATGTCAGCATCGGCGTCATTATCGGCCGGCAGTGATGCGTCTGGCCCCGG
TTCGCCAGCAGGAGACCAGGGCAACGCCCTGCCTCAGTTAGATTCTCTCA
TTTCTCACCTGGTGGCAGCAAAACGGTCTCTGTCATCCATCAATCACGTG
TGGCGTGCGAATGAAATTGTAACTTCCGCTCGCTCTGCATTGGAAGAAAG
TGTCGTGATTTCCGCACGGACTGGCTTTCTCCGACGCGGGCTTAACAATC
AACTACGGCTCCTTTACAGTGTACGCTCTGAGGTCGAGGAAGTTTCACTC
AGGGGCCGGTCGGAGTTCGCCAGTGTTTTGAAAAGTCTAGACACTGCCGA
TGCCCGACTGAGGAAGACCCTCGACTCCTTACGGGATACAATTGTTCACG
CTTCATTTCGTCCCGAGGGCGAAGAACCCAGAAGCTTACATGACTTTGTG
GATGAACGTGGAGTTGAGGAGCTTCGTGCAGCTTTGAAGAGCTCAATTGA
TCGTACCAATGAGGCGCAGGCGGAACTGGATACATCCAATTCCGCGTTCG
ATGATGAGCTCCAGTCCATCAAGCAAGCTCTGGGTAATTACCGAGAAGCT
ACCAAGTTAGCTTCCTCATCCTCCTCTTCTTCATCCGCGTCTAATTCAAG
CCTGCCGTCATTGTCATCAATGCCACCCATGTTACAGTCATTGGAGATGC
ATGCGCAGGAAATGGCCAATCTGCTAGAGTCCTTGGTCCAGCACTTTGAT
CTTTGTGTAACTGCTGTCAAGCATACGGAAGGCGGTGGAGCTGCCGCGCG
ATCTATTACTGGGGATATGCCCGCTGCCGTCACTGTCAGTGGCCGTGGAG
TACCGAATATCGAGCAAGGCATTCATGACAACCTAAACGCCCCACTTGAT
CCCTTGAGTGAGTCTGACTACCAAGAGATGGTGAATGTTTTGATCAAGGA
TGCAGCAGAGGCCGAAGACGTGGTCATGGAAATCCAAGATCGTATCGGCG
ATATGGAATCAATTCTTGAGAACATTTTGTCTCAACGTGATGTTCTTCTC
TCCATCTACAATGCCACTATTGGCGTCTTCCGACACCTTTCATCTCTTGC
AACTGCGCGTCTACCGGGTTATATTGCTCAGGCACACAGCTTCACTCGTG
TGTGGGGCGAAGAGCACGATCGTATTAACGGTGGGCTAGCGGACTTGTCG
GATCTTAATACCCTTTACGACGGGTTTTTAGAAGCCTATGATGGCTTGAT
CCTCGAAGTGGCACGCCGACGGCACGTACGACAGCGTGTGGAAAAGGTCC
TTCGTGAAACGAAACACAAATTGGATCAGCTGTACGAAGAGGATGTCAAT
GCTCGCGAAACGTTCCGAGTCGAGCAAGGGGACTATTTGCCATCCGACAT
TTGGCCTGGTATCGGCCGCGAGCCGATGCGAATAGAATTTCGACGCATAT
CCGGCGGTATTCTCAAGGGAGCGCCTCCCGAACAGCCGGATGCACAAGAC
CAGCCGGCCGCTGAACCCAATGAACCCCAGTCAGGGCCCTCTGAAACGAC
GGAGGAAGGGGAAATTATCCCACATTTACCGAAATCGCTGGTTGAAGAGG
CCCTCCATCGCCTCAAGGCGAGGAATAGACAAGCCATGTAG back to topCoding sequence (CDS) from alignment at An02:1144920..1146560+ >CBS51388_001617-T1 ID=CBS51388_001617-T1|Name=CBS51388_001617-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1641bp|location=Sequence derived from alignment at An02:1144920..1146560+ (Aspergillus niger CBS 513.88)
ATGTCAGCATCGGCGTCATTATCGGCCGGCAGTGATGCGTCTGGCCCCGG
TTCGCCAGCAGGAGACCAGGGCAACGCCCTGCCTCAGTTAGATTCTCTCA
TTTCTCACCTGGTGGCAGCAAAACGGTCTCTGTCATCCATCAATCACGTG
TGGCGTGCGAATGAAATTGTAACTTCCGCTCGCTCTGCATTGGAAGAAAG
TGTCGTGATTTCCGCACGGACTGGCTTTCTCCGACGCGGGCTTAACAATC
AACTACGGCTCCTTTACAGTGTACGCTCTGAGGTCGAGGAAGTTTCACTC
AGGGGCCGGTCGGAGTTCGCCAGTGTTTTGAAAAGTCTAGACACTGCCGA
TGCCCGACTGAGGAAGACCCTCGACTCCTTACGGGATACAATTGTTCACG
CTTCATTTCGTCCCGAGGGCGAAGAACCCAGAAGCTTACATGACTTTGTG
GATGAACGTGGAGTTGAGGAGCTTCGTGCAGCTTTGAAGAGCTCAATTGA
TCGTACCAATGAGGCGCAGGCGGAACTGGATACATCCAATTCCGCGTTCG
ATGATGAGCTCCAGTCCATCAAGCAAGCTCTGGGTAATTACCGAGAAGCT
ACCAAGTTAGCTTCCTCATCCTCCTCTTCTTCATCCGCGTCTAATTCAAG
CCTGCCGTCATTGTCATCAATGCCACCCATGTTACAGTCATTGGAGATGC
ATGCGCAGGAAATGGCCAATCTGCTAGAGTCCTTGGTCCAGCACTTTGAT
CTTTGTGTAACTGCTGTCAAGCATACGGAAGGCGGTGGAGCTGCCGCGCG
ATCTATTACTGGGGATATGCCCGCTGCCGTCACTGTCAGTGGCCGTGGAG
TACCGAATATCGAGCAAGGCATTCATGACAACCTAAACGCCCCACTTGAT
CCCTTGAGTGAGTCTGACTACCAAGAGATGGTGAATGTTTTGATCAAGGA
TGCAGCAGAGGCCGAAGACGTGGTCATGGAAATCCAAGATCGTATCGGCG
ATATGGAATCAATTCTTGAGAACATTTTGTCTCAACGTGATGTTCTTCTC
TCCATCTACAATGCCACTATTGGCGTCTTCCGACACCTTTCATCTCTTGC
AACTGCGCGTCTACCGGGTTATATTGCTCAGGCACACAGCTTCACTCGTG
TGTGGGGCGAAGAGCACGATCGTATTAACGGTGGGCTAGCGGACTTGTCG
GATCTTAATACCCTTTACGACGGGTTTTTAGAAGCCTATGATGGCTTGAT
CCTCGAAGTGGCACGCCGACGGCACGTACGACAGCGTGTGGAAAAGGTCC
TTCGTGAAACGAAACACAAATTGGATCAGCTGTACGAAGAGGATGTCAAT
GCTCGCGAAACGTTCCGAGTCGAGCAAGGGGACTATTTGCCATCCGACAT
TTGGCCTGGTATCGGCCGCGAGCCGATGCGAATAGAATTTCGACGCATAT
CCGGCGGTATTCTCAAGGGAGCGCCTCCCGAACAGCCGGATGCACAAGAC
CAGCCGGCCGCTGAACCCAATGAACCCCAGTCAGGGCCCTCTGAAACGAC
GGAGGAAGGGGAAATTATCCCACATTTACCGAAATCGCTGGTTGAAGAGG
CCCTCCATCGCCTCAAGGCGAGGAATAGACAAGCCATGTAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006914 | autophagy |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR007240 |
| DBxref | PFAM:PF04108 |
| Product | autophagy protein 17 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1144920..1146560 + |
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