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Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1181458..1183487+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001629-T1 ID=CBS51388_001629-T1|Name=CBS51388_001629-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=2030bp|location=Sequence derived from alignment at An02:1181458..1183487+ (Aspergillus niger CBS 513.88)
ATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGA
GACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACC
TGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCT
ACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATAT
CCTTGGTGCGTACATCCTGGTGCCTGTGGTGGATGATGAGTATACTAACA
ATACCAGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCT
CCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGTCAGTACTTTCCAGG
GAAGATGAATTAAAAAATTGAGACAAGCTAAATTGTATCATGCTTTAGGC
CGACCCCTCGTTGAAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAG
AGCTTGCAGAACAGGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGC
GGAAAGGATGTCCGCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGT
ACAGCGGACTATGCTCTCTGACTACCCTGATATCGTCATCTCCACCCCCG
CTCGTGTGATTGCCAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTG
ACGCACCTCGTTATCGACGAAGCCGACTTGGTCCTTTCATACGGATACGA
TGAAGACATCAATGCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCT
TCCTCATGAGTGCTACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTG
TTCTGTCGCAGCCCTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGG
CGCCGGTGTTAGCCAGTTTGTCGTCAAGTAAGCCTCACATGTACACGGCG
AAGGATTTGCAAGCCTCATACTAACTGTTTCGCTCATCAGATGCGCAGAG
GATGAGAAATTCCTCCTGACATATGTTATTTTCAAGCTTCAGCTCATCAA
GGGCAAAGTCATCATATTCGTCGGAGACATCGACCGTTGCTATCGCCTCA
AGCTTTTCCTGGAACAATTCGGCGTCAAGAGCTGTGTGCTCAACTCTGAG
TTGCCAGTGAACTCCCGAATCCACGTCGTCCAGGAGTTCAACAAGGGTGT
TTACGACATCATCATTGCTGCAGATGACCAAGAAGTCCTCGGATCTAAGT
CTAAGAAGGCCAAGAATGCCGGTGCCGATGAGGAGGAGGAAGCTGCTGGT
GTCATGGGCTCGAGTGATGACGAAGAGGCTGAAGACGACAAGAAGTCGAA
TCGTCCCGATAAGCGCCGCAAGCTTACCGCGAAAGAAAAGGACTATGGTA
TCTCTCGTGGTATCGACTTCCAGAACGTGGCCTGCGTCTTGAACTTTGAC
CTCCCCACAACCGCCAAATCCTACACACACCGCATTGGACGAACCGGCCG
TGGCGGCAAGACCGGCATGGCGCTCTCGTTCGTCGTCCCGGCAGACCAGT
ACGGAAAGCACAAACCCACTTCCTTCCCCACCGCCAAACATGATGAAGCC
GTCCTGGCCAAGATCGTCAAACGACAATCCAAACATGGCCACGAAGTCAA
GCCCTACCACTTTGAGATGAGTCAAGTCGACGCCTTCCGCTACCGTATGA
CCGACGGTCTTCGCGCCATCACCCGACTTGCCGTTCAGGAAGCCCGTGCT
CGTGAGATCCGTCAGGAGCTGGTCAAGAGCGAGAAACTGAAGCGCCACTT
CGAAGACAACCCCGATGAGCTGCGCCAGCTCCGTCACGATGGCGAGTTGC
GCTCCGCACGTATCCAACCCCACCTCAAACACATCCCCGAATACCTGATG
CCGTCCAAGGGTCGCAAGGGCATTTCCAGTGAGGACGTCGGCTTCGTTGG
GTTCCGGAAATCCAGCGACAACCGTATCCGCAAGGCTAGAGATAAGAACC
GCGCCAAGGGCAAGGGCCGCAAGCCGTCAGGTGTTAGAAAGGTTGATCCG
TTGAAGACGTTCAATCGGGGTCGGAAATAG back to topCoding sequence (CDS) from alignment at An02:1181458..1183487+ >CBS51388_001629-T1 ID=CBS51388_001629-T1|Name=CBS51388_001629-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=7404bp|location=Sequence derived from alignment at An02:1181458..1183487+ (Aspergillus niger CBS 513.88)
ATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGGA
GACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAACC
TGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCCT
ACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATAT
CCTTGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCTCC
CTATTCTTCAGACCATTCTTCAGAAGAAAGCTGCCGACCCCTCGTTGAAA
GCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCAGAACAGGT
CCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGATGTCCGCT
CTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGACTATGCTC
TCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGTGATTGCCAA
CCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACCTCGTTATCG
ACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGACATCAATGCG
CTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCATGAGTGCTAC
GCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCGCAGCCCTG
TTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTGTTAGCCAG
TTTGTCGTCAAATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTAT
TTTCAAGCTTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGACA
TCGACCGTTGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAAG
AGCTGTGTGCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCGT
CCAGGAGTTCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGACC
AAGAAGTCCTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGAT
GAGGAGGAGGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGGC
TGAAGACGACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACCG
CGAAAGAAAAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGTG
GCCTGCGTCTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACACA
CCGCATTGGACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCGT
TCGTCGTCCCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCCC
ACCGCCAAACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACAATC
CAAACATGGCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTCG
ACGCCTTCCGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACTT
GCCGTTCAGGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGAG
CGAGAAACTGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAGC
TCCGTCACGATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAAA
CACATCCCCGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCAG
TGAGGACGTCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATCC
GCAAGGCTAGAGATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTCA
GGTGTTAGAAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAATA
GATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCGG
AGACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAAC
CTGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGCC
TACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGATA
TCCTTGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCTC
CCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGCCGACCCCTCGTTGAA
AGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCAGAACAGG
TCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGATGTCCGC
TCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGACTATGCT
CTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGTGATTGCCA
ACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACCTCGTTATC
GACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGACATCAATGC
GCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCATGAGTGCTA
CGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCGCAGCCCT
GTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTGTTAGCCA
GTTTGTCGTCAAATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTTA
TTTTCAAGCTTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGAC
ATCGACCGTTGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCAA
GAGCTGTGTGCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTCG
TCCAGGAGTTCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGAC
CAAGAAGTCCTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCGA
TGAGGAGGAGGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAGG
CTGAAGACGACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTACC
GCGAAAGAAAAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACGT
GGCCTGCGTCTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACAC
ACCGCATTGGACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTCG
TTCGTCGTCCCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCCC
CACCGCCAAACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACAAT
CCAAACATGGCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGTC
GACGCCTTCCGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGACT
TGCCGTTCAGGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAGA
GCGAGAAACTGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCAG
CTCCGTCACGATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCAA
ACACATCCCCGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCCA
GTGAGGACGTCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTATC
CGCAAGGCTAGAGATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGTC
AGGTGTTAGAAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAAT
AGATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGCG
GAGACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCAA
CCTGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAGC
CTACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGAT
ATCCTTGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCCT
CCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGCCGACCCCTCGTTGA
AAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCAGAACAG
GTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGATGTCCG
CTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGACTATGC
TCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGTGATTGCC
AACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACCTCGTTAT
CGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGACATCAATG
CGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCATGAGTGCT
ACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCGCAGCCC
TGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTGTTAGCC
AGTTTGTCGTCAAATGCGCAGAGGATGAGAAATTCCTCCTGACATATGTT
ATTTTCAAGCTTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAGA
CATCGACCGTTGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTCA
AGAGCTGTGTGCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGTC
GTCCAGGAGTTCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATGA
CCAAGAAGTCCTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCCG
ATGAGGAGGAGGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGAG
GCTGAAGACGACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTAC
CGCGAAAGAAAAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAACG
TGGCCTGCGTCTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACACA
CACCGCATTGGACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCTC
GTTCGTCGTCCCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTCC
CCACCGCCAAACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACAA
TCCAAACATGGCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAGT
CGACGCCTTCCGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGAC
TTGCCGTTCAGGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAAG
AGCGAGAAACTGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCCA
GCTCCGTCACGATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTCA
AACACATCCCCGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTCC
AGTGAGGACGTCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTAT
CCGCAAGGCTAGAGATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCGT
CAGGTGTTAGAAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAAA
TAGATGAAGCGCAAGTTGGATGCTAACGATGTTCCCTCCCCCGAAGTTGC
GGAGACTAAGGAGACCTCCGATGCGGACGAGGCCGACTTTGAAAGCCTCA
ACCTGGATCCGCGACTGCGCCAAGCCTTGATCAAAGAGAAGTTCACCAAG
CCTACGCCCGTCCAGGCCAAGGCTATTCCTCTGGCGCTCGCAGGCAAAGA
TATCCTTGCTCGTGCAAAGACCGGCTCCGGAAAGACCGCCGCATATGTCC
TCCCTATTCTTCAGACCATTCTTCAGAAGAAAGCTGCCGACCCCTCGTTG
AAAGCCACCACTGGCCTCATCCTCGTCCCCACTCGAGAGCTTGCAGAACA
GGTCCAAAAAGTCGTCACCACATTCGCTGCTTTCTGCGGAAAGGATGTCC
GCTCTGTGAACTTGACTCAGAAGGTTTCCGAGGCCGTACAGCGGACTATG
CTCTCTGACTACCCTGATATCGTCATCTCCACCCCCGCTCGTGTGATTGC
CAACCTCGGAAACTCCTCTCTTTCGCTGGATAACCTGACGCACCTCGTTA
TCGACGAAGCCGACTTGGTCCTTTCATACGGATACGATGAAGACATCAAT
GCGCTTTCCAAGGCGATCCCCCGTGGCGTACAGACCTTCCTCATGAGTGC
TACGCTCACCTCGGAAGTGGATACCTTGAAGGGATTGTTCTGTCGCAGCC
CTGTTGTGCTGAAGTTGGAGGATAAGGAGGAGAAAGGCGCCGGTGTTAGC
CAGTTTGTCGTCAAATGCGCAGAGGATGAGAAATTCCTCCTGACATATGT
TATTTTCAAGCTTCAGCTCATCAAGGGCAAAGTCATCATATTCGTCGGAG
ACATCGACCGTTGCTATCGCCTCAAGCTTTTCCTGGAACAATTCGGCGTC
AAGAGCTGTGTGCTCAACTCTGAGTTGCCAGTGAACTCCCGAATCCACGT
CGTCCAGGAGTTCAACAAGGGTGTTTACGACATCATCATTGCTGCAGATG
ACCAAGAAGTCCTCGGATCTAAGTCTAAGAAGGCCAAGAATGCCGGTGCC
GATGAGGAGGAGGAAGCTGCTGGTGTCATGGGCTCGAGTGATGACGAAGA
GGCTGAAGACGACAAGAAGTCGAATCGTCCCGATAAGCGCCGCAAGCTTA
CCGCGAAAGAAAAGGACTATGGTATCTCTCGTGGTATCGACTTCCAGAAC
GTGGCCTGCGTCTTGAACTTTGACCTCCCCACAACCGCCAAATCCTACAC
ACACCGCATTGGACGAACCGGCCGTGGCGGCAAGACCGGCATGGCGCTCT
CGTTCGTCGTCCCGGCAGACCAGTACGGAAAGCACAAACCCACTTCCTTC
CCCACCGCCAAACATGATGAAGCCGTCCTGGCCAAGATCGTCAAACGACA
ATCCAAACATGGCCACGAAGTCAAGCCCTACCACTTTGAGATGAGTCAAG
TCGACGCCTTCCGCTACCGTATGACCGACGGTCTTCGCGCCATCACCCGA
CTTGCCGTTCAGGAAGCCCGTGCTCGTGAGATCCGTCAGGAGCTGGTCAA
GAGCGAGAAACTGAAGCGCCACTTCGAAGACAACCCCGATGAGCTGCGCC
AGCTCCGTCACGATGGCGAGTTGCGCTCCGCACGTATCCAACCCCACCTC
AAACACATCCCCGAATACCTGATGCCGTCCAAGGGTCGCAAGGGCATTTC
CAGTGAGGACGTCGGCTTCGTTGGGTTCCGGAAATCCAGCGACAACCGTA
TCCGCAAGGCTAGAGATAAGAACCGCGCCAAGGGCAAGGGCCGCAAGCCG
TCAGGTGTTAGAAAGGTTGATCCGTTGAAGACGTTCAATCGGGGTCGGAA
ATAG back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003676 | nucleic acid binding |
| GO:0005524 | ATP binding |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| Note | antiSMASH:Cluster_2.3 |
| Note | SMCOG1122:ATP-dependent RNA helicase |
| DBxref | InterPro:IPR027417 |
| DBxref | InterPro:IPR014014 |
| DBxref | InterPro:IPR011545 |
| DBxref | InterPro:IPR001650 |
| DBxref | InterPro:IPR014001 |
| DBxref | PFAM:PF04851 |
| DBxref | PFAM:PF00271 |
| DBxref | PFAM:PF00270 |
| Product | ATP-dependent DNA/RNA helicase |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1181458..1183487 + |
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