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CBS51388_001650-T1, CBS51388_001650-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001650-T1
Unique NameCBS51388_001650-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1237136..1237692-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001650-T1 ID=CBS51388_001650-T1|Name=CBS51388_001650-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=557bp|location=Sequence derived from alignment at An02:1237136..1237692- (Aspergillus niger CBS 513.88)
ATGACTGGACGTAAGTATTTTATCCTCTTTACTTGCTTCGACTACTAGTT
CCTCGTCGTTACCCTACTCTCGGGTCGAATGGTGGTGATGATCTTGGATG
ATCTTGATGATGCACCCCTGGCGACACGTGACCGCGTACCTGTCACGCCC
ACGCGTCGTGTCCAAGATTTCATCTGATCTTCACCCCACCCTCACATACT
CTCATTGCTTGATGAAACAAAATATCACTCAACATATACTAACATTCTTC
TACAGGCGGAAAAGGAGGCAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTC
ACCGTAAGATCTTGCGTGACAACATCCAGGGTATCACCAAGCCCGCTATC
CGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTA
CGAAGAGACTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTG
ATGCCGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTC
GACGTTGTCTACGCCCTCAAGCGCCAGGGCCGTACCCTGTACGGTTTCGG
TGGTTAA
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Coding sequence (CDS) from alignment at An02:1237136..1237692-

>CBS51388_001650-T1 ID=CBS51388_001650-T1|Name=CBS51388_001650-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=624bp|location=Sequence derived from alignment at An02:1237136..1237692- (Aspergillus niger CBS 513.88)
GCGGAAAAGGAGGCAAGGGTCTCGGCAAGGGTGGCGCCAAGCGTCACCGT
AAGATCTTGCGTGACAACATCCAGGGTATCACCAAGCCCGCTATCCGCCG
TCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCATGATCTACGAAG
AGACTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTCATCCGTGATGCC
GTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCACCTCCCTCGACGT
TGTCTACGCCCTCAAGCGCCAGGGCCGTACCCTGTACGGTTTCGGTGGTT
AAATGACTGGACGCGGAAAAGGAGGCAAGGGTCTCGGCAAGGGTGGCGCC
AAGCGTCACCGTAAGATCTTGCGTGACAACATCCAGGGTATCACCAAGCC
CGCTATCCGCCGTCTCGCTCGCCGTGGTGGTGTCAAGCGTATCTCCGCCA
TGATCTACGAAGAGACTCGTGGTGTTCTCAAGTCCTTCCTCGAGTCCGTC
ATCCGTGATGCCGTCACCTACACTGAGCACGCCAAGCGCAAGACCGTCAC
CTCCCTCGACGTTGTCTACGCCCTCAAGCGCCAGGGCCGTACCCTGTACG
GTTTCGGTGGTTAAATGACTGGAC
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0000786nucleosome
GO:0042025host cell nucleus
Vocabulary: Molecular Function
TermDefinition
GO:0046982protein heterodimerization activity
GO:0003677DNA binding
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001650CBS51388_001650Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001650-T1CBS51388_001650-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001650-T1.cdsCBS51388_001650-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001650-T1.exon2CBS51388_001650-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001650-T1.exon1CBS51388_001650-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
DBxrefInterPro:IPR019809
DBxrefInterPro:IPR009072
DBxrefInterPro:IPR035425
DBxrefInterPro:IPR001951
DBxrefPFAM:PF02969
DBxrefPFAM:PF15511
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1237136..1237692 -
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