|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1276871..1278095+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001660-T1 ID=CBS51388_001660-T1|Name=CBS51388_001660-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1225bp|location=Sequence derived from alignment at An02:1276871..1278095+ (Aspergillus niger CBS 513.88)
ATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTT
CGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAGTTCACCG
ACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCG
ACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGA
AGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCG
CTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGT
TACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGCGCACTTC
TTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCG
CGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCAC
CAGGACCGTCGGATATCTCATGCGTAAGTTTACCTCATCATCTGAAGCTT
TCTGCGGTGTGTATATGGAGGGAAATATGCTTACATTCATTTTTTCATCT
TGTGTAGTGATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACA
TTCGGAGATGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGA
TATGACACCTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTG
ACTCCTACGGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCC
GGCGGAAACTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTC
TGTGACTGACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACC
TGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCT
CCGGGACCCCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAA
CACCCAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCC
CGTCGTCTCTTCAGACCCATATGTACAGTCACACTGGTGAAAAACGTAAG
TTCCAGAACAAGTCTCTTTTAGTAGTGGTCTGTGATACTAATAGTCGGGA
ATCTAGCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTC
GTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGG
TGCTTCGGGCGAAGACGAAGAGTAA back to topCoding sequence (CDS) from alignment at An02:1276871..1278095+ >CBS51388_001660-T1 ID=CBS51388_001660-T1|Name=CBS51388_001660-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3240bp|location=Sequence derived from alignment at An02:1276871..1278095+ (Aspergillus niger CBS 513.88)
ATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCGGGATGGGCTT
CGATAACGTGTATCAACACAACATGCACCACAGCGCTCCGCAGTTCACCG
ACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCCGGTCTACGCG
ACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTAAGCAGGAGGA
AGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATTCCCGTTTCCG
CTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTACTGCTTCGAGT
TACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGCCGCGCACTTC
TTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATGACCAGCTTCG
CGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTATGCACCACCAC
CAGGACCGTCGGATATCTCATGCTGATGCTCGTGTCGGTCAATCGCAACC
CCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGCCGCGGAATGG
TCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGGCCCTCGCAGC
TCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACACACTCTTCTGG
ATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCCGCCTCTGTCG
CATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTACCTCGGAATCT
TACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGTCGAACCTGTT
GACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGCCAGTTTAGCT
CCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAAGGTGTGCGAC
AAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGTACAGTCACAC
TGGTGAAAAACCATTCGCATGTGACGTGGAAGGCTGTGGCCGTCATTTCT
CGGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAAAGGAGAAAAG
GAAGGTGCTTCGGGCGAAGACGAAGAGTAAATGACGATGGTCATTGAGAA
CCAGAACCGCCAATACGGCGGGATGGGCTTCGATAACGTGTATCAACACA
ACATGCACCACAGCGCTCCGCAGTTCACCGACCCATGGACCGCTCAAACT
TCGTCCCATTCCACTCCCCCGGTCTACGCGACTTCCATGGGACCCAGCCA
GATTGGCCTCAGCCATGTTAAGCAGGAGGAAGTGAGCCGCCCACCGATGT
CTATGCCATACTCGAGTATTCCCGTTTCCGCTCCCTCGATGGTCGCCGGG
AGCAACTATCCTACTGCTACTGCTTCGAGTTACCCCGGTCCGGAGATGAT
GGGTTTGTCGCACGACATGCCGCGCACTTCTTTCGATCAAGCTCCGGCCT
ATACCACCGCCTCGCCCATGACCAGCTTCGCGCCTGCGAGCTACGCCCCG
CTTAGCTACGCTCCGTCTATGCACCACCACCAGGACCGTCGGATATCTCA
TGCTGATGCTCGTGTCGGTCAATCGCAACCCCCTTCCGCCCCAACATTCG
GAGATGCTCTTGATGCCAGCCGCGGAATGGTCGCGCTCAGCCAGGATATG
ACACCTCGCAATATCTACGGCCCTCGCAGCTCGCGAGGCTCGGGTGACTC
CTACGGTTTCCCCTCGACACACTCTTCTGGATCGTCGATCTCTTCCGGCG
GAAACTACCCCTACTATTCCGCCTCTGTCGCATCTGTGGAGTCCTCTGTG
ACTGACTACAGCTCTACTACCTCGGAATCTTACGAGAACGGCCACCTGTC
GCGGACGCTGCCTCGCCCGTCGAACCTGTTGACGGGAAGTGCGCCTCCGG
GACCCCAGTCGATGATGAGCCAGTTTAGCTCCAAGATGCCGTCCAACACC
CAGAAGAAGCACAAGTGCAAGGTGTGCGACAAGCGGTTTACCCGCCCGTC
GTCTCTTCAGACCCATATGTACAGTCACACTGGTGAAAAACCATTCGCAT
GTGACGTGGAAGGCTGTGGCCGTCATTTCTCGGTCGTCTCTAACCTGCGG
CGGCACAAGAAGGTCCACAAAGGAGAAAAGGAAGGTGCTTCGGGCGAAGA
CGAAGAGTAAATGACGATGGTCATTGAGAACCAGAACCGCCAATACGGCG
GGATGGGCTTCGATAACGTGTATCAACACAACATGCACCACAGCGCTCCG
CAGTTCACCGACCCATGGACCGCTCAAACTTCGTCCCATTCCACTCCCCC
GGTCTACGCGACTTCCATGGGACCCAGCCAGATTGGCCTCAGCCATGTTA
AGCAGGAGGAAGTGAGCCGCCCACCGATGTCTATGCCATACTCGAGTATT
CCCGTTTCCGCTCCCTCGATGGTCGCCGGGAGCAACTATCCTACTGCTAC
TGCTTCGAGTTACCCCGGTCCGGAGATGATGGGTTTGTCGCACGACATGC
CGCGCACTTCTTTCGATCAAGCTCCGGCCTATACCACCGCCTCGCCCATG
ACCAGCTTCGCGCCTGCGAGCTACGCCCCGCTTAGCTACGCTCCGTCTAT
GCACCACCACCAGGACCGTCGGATATCTCATGCTGATGCTCGTGTCGGTC
AATCGCAACCCCCTTCCGCCCCAACATTCGGAGATGCTCTTGATGCCAGC
CGCGGAATGGTCGCGCTCAGCCAGGATATGACACCTCGCAATATCTACGG
CCCTCGCAGCTCGCGAGGCTCGGGTGACTCCTACGGTTTCCCCTCGACAC
ACTCTTCTGGATCGTCGATCTCTTCCGGCGGAAACTACCCCTACTATTCC
GCCTCTGTCGCATCTGTGGAGTCCTCTGTGACTGACTACAGCTCTACTAC
CTCGGAATCTTACGAGAACGGCCACCTGTCGCGGACGCTGCCTCGCCCGT
CGAACCTGTTGACGGGAAGTGCGCCTCCGGGACCCCAGTCGATGATGAGC
CAGTTTAGCTCCAAGATGCCGTCCAACACCCAGAAGAAGCACAAGTGCAA
GGTGTGCGACAAGCGGTTTACCCGCCCGTCGTCTCTTCAGACCCATATGT
ACAGTCACACTGGTGAAAAACCATTCGCATGTGACGTGGAAGGCTGTGGC
CGTCATTTCTCGGTCGTCTCTAACCTGCGGCGGCACAAGAAGGTCCACAA
AGGAGAAAAGGAAGGTGCTTCGGGCGAAGACGAAGAGTAA back to top
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR036236 |
| DBxref | InterPro:IPR013087 |
| DBxref | PFAM:PF12874 |
| DBxref | PFAM:PF00096 |
| Product | hypothetical protein |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1276871..1278095 + |
|
