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CBS51388_001663-T1, CBS51388_001663-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001663-T1
Unique NameCBS51388_001663-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1286043..1287338-

Legend: polypeptideCDSexon
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001663-T1 ID=CBS51388_001663-T1|Name=CBS51388_001663-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1296bp|location=Sequence derived from alignment at An02:1286043..1287338- (Aspergillus niger CBS 513.88)
ATGGCGCCTCTCGTTCCCTCGCAGGAGGAGCTTGATCGCAGAAGGGTATG
TTCCCTCTTCCGACCGTGGCTTCTTCTCTCTCTCTTACGTCCTTCATCAT
ACTGACTGCATTGACTTCCAGATCGTCGACATCAACCCAGAGACCGTCTC
CAACATCCCCTCCACAGATTTTCCTGGTCACTGGCCCGGCGAGTCGCACG
AATGGTCCCTCGCAAAGTTCAAGAATGTACGTTGGTAGTACTCAAGTGTC
CGCGCTCAATTGCCCCTCCTCCCAGTCAAGCTTCATCAGCTTTACGCTCA
CACATCTTTTTTTTTCGCGAACAGGATCTCAAGATCGACTTCCACCGCAA
CGAGCGATTCGAATCCTCCTTCTCTCTCATCGGAGTCGACGCCTCCATTG
CCAATGCCTTCCGTCGCATTCTCATGGCTGAGGTGCCCAGCATCGCCATC
GAATACGTCTTCGTCCACAACAACACCTCTGTCATTCAGGATGAGGTTCT
CGCACAACGTCTGGGTCTGATTCCCCTCAAGGGTTCCGTGGAGGGCATCA
ACTGGATGCGCTGGTTCAAGAAGCCTACCGACGACGATCCCAATGGCAGC
AGTCCCGCCGATTACAACACCATCGTCTTGCGCTTGGACGTCGAATGTAC
CAAGAACCCCAACGCGGATCCCGAGGAGACTGACCCCCGCAAACTCTACA
AGAATGCGCACGTCTACGCCAAAGATATCACATTCCACCCCGTCGGTCGC
CAGGAACAGTTCTTTGCTGGCGATGACGCAATTCAGCCCGTCAACCCGGA
CATCCTGGTCGCCAAGCTTCGTCCCGGTCAGGCGATTGAAATGGAACTTC
ACTGTATCAAGGGTATCGGTGCCGACCATGCCAAGTTCTCCCCTGTCGCC
ACGGCCACCTACCGTCTACTACCCGACATCAAGATCCTCCGCCCCATCAT
CGGTGATGATGCCAAGAAGTTTGCCAAGTGCTTCCCCAGCGGTGTCATTG
GCCTCGAGAAGGTCACTCGTGAGGAGGCCAAGCAGAAGGACAGCGGATAT
GAGGGCCACGAGGGCGAATTGAAGGCAGTTGTTGTGGATCCCTTCAAGGA
TACCGTCAGCAGAGAGTGTCTGAGACACGAGGAGTTCCAGGGCAAGGTCA
AGCTCGGTCGCGTCCGCGACCACTTCATCTTCAACATCGAGAGTGTTGGC
CAATTCGAAAGCGACACCCTCTTCCTGGAGAGCGTCAAGGTGCTGAAGCT
GAAATGCGCAAGATGGAAGCGCGGCTTGACGGACCTTATGCGCTAA
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Coding sequence (CDS) from alignment at An02:1286043..1287338-

>CBS51388_001663-T1 ID=CBS51388_001663-T1|Name=CBS51388_001663-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=3366bp|location=Sequence derived from alignment at An02:1286043..1287338- (Aspergillus niger CBS 513.88)
GATCTCAAGATCGACTTCCACCGCAACGAGCGATTCGAATCCTCCTTCTC
TCTCATCGGAGTCGACGCCTCCATTGCCAATGCCTTCCGTCGCATTCTCA
TGGCTGAGGTGCCCAGCATCGCCATCGAATACGTCTTCGTCCACAACAAC
ACCTCTGTCATTCAGGATGAGGTTCTCGCACAACGTCTGGGTCTGATTCC
CCTCAAGGGTTCCGTGGAGGGCATCAACTGGATGCGCTGGTTCAAGAAGC
CTACCGACGACGATCCCAATGGCAGCAGTCCCGCCGATTACAACACCATC
GTCTTGCGCTTGGACGTCGAATGTACCAAGAACCCCAACGCGGATCCCGA
GGAGACTGACCCCCGCAAACTCTACAAGAATGCGCACGTCTACGCCAAAG
ATATCACATTCCACCCCGTCGGTCGCCAGGAACAGTTCTTTGCTGGCGAT
GACGCAATTCAGCCCGTCAACCCGGACATCCTGGTCGCCAAGCTTCGTCC
CGGTCAGGCGATTGAAATGGAACTTCACTGTATCAAGGGTATCGGTGCCG
ACCATGCCAAGTTCTCCCCTGTCGCCACGGCCACCTACCGTCTACTACCC
GACATCAAGATCCTCCGCCCCATCATCGGTGATGATGCCAAGAAGTTTGC
CAAGTGCTTCCCCAGCGGTGTCATTGGCCTCGAGAAGGTCACTCGTGAGG
AGGCCAAGCAGAAGGACAGCGGATATGAGGGCCACGAGGGCGAATTGAAG
GCAGTTGTTGTGGATCCCTTCAAGGATACCGTCAGCAGAGAGTGTCTGAG
ACACGAGGAGTTCCAGGGCAAGGTCAAGCTCGGTCGCGTCCGCGACCACT
TCATCTTCAACATCGAGAGTGTTGGCCAATTCGAAAGCGACACCCTCTTC
CTGGAGAGCGTCAAGGTGCTGAAGCTGAAATGCGCAAGATGGAAGCGCGG
CTTGACGGACCTTATGCGCTAAATCGTCGACATCAACCCAGAGACCGTCT
CCAACATCCCCTCCACAGATTTTCCTGGTCACTGGCCCGGCGAGTCGCAC
GAATGGTCCCTCGCAAAGTTCAAGAATATGGCGCCTCTCGTTCCCTCGCA
GGAGGAGCTTGATCGCAGAAGGGATCTCAAGATCGACTTCCACCGCAACG
AGCGATTCGAATCCTCCTTCTCTCTCATCGGAGTCGACGCCTCCATTGCC
AATGCCTTCCGTCGCATTCTCATGGCTGAGGTGCCCAGCATCGCCATCGA
ATACGTCTTCGTCCACAACAACACCTCTGTCATTCAGGATGAGGTTCTCG
CACAACGTCTGGGTCTGATTCCCCTCAAGGGTTCCGTGGAGGGCATCAAC
TGGATGCGCTGGTTCAAGAAGCCTACCGACGACGATCCCAATGGCAGCAG
TCCCGCCGATTACAACACCATCGTCTTGCGCTTGGACGTCGAATGTACCA
AGAACCCCAACGCGGATCCCGAGGAGACTGACCCCCGCAAACTCTACAAG
AATGCGCACGTCTACGCCAAAGATATCACATTCCACCCCGTCGGTCGCCA
GGAACAGTTCTTTGCTGGCGATGACGCAATTCAGCCCGTCAACCCGGACA
TCCTGGTCGCCAAGCTTCGTCCCGGTCAGGCGATTGAAATGGAACTTCAC
TGTATCAAGGGTATCGGTGCCGACCATGCCAAGTTCTCCCCTGTCGCCAC
GGCCACCTACCGTCTACTACCCGACATCAAGATCCTCCGCCCCATCATCG
GTGATGATGCCAAGAAGTTTGCCAAGTGCTTCCCCAGCGGTGTCATTGGC
CTCGAGAAGGTCACTCGTGAGGAGGCCAAGCAGAAGGACAGCGGATATGA
GGGCCACGAGGGCGAATTGAAGGCAGTTGTTGTGGATCCCTTCAAGGATA
CCGTCAGCAGAGAGTGTCTGAGACACGAGGAGTTCCAGGGCAAGGTCAAG
CTCGGTCGCGTCCGCGACCACTTCATCTTCAACATCGAGAGTGTTGGCCA
ATTCGAAAGCGACACCCTCTTCCTGGAGAGCGTCAAGGTGCTGAAGCTGA
AATGCGCAAGATGGAAGCGCGGCTTGACGGACCTTATGCGCTAAATCGTC
GACATCAACCCAGAGACCGTCTCCAACATCCCCTCCACAGATTTTCCTGG
TCACTGGCCCGGCGAGTCGCACGAATGGTCCCTCGCAAAGTTCAAGAATA
TGGCGCCTCTCGTTCCCTCGCAGGAGGAGCTTGATCGCAGAAGGGATCTC
AAGATCGACTTCCACCGCAACGAGCGATTCGAATCCTCCTTCTCTCTCAT
CGGAGTCGACGCCTCCATTGCCAATGCCTTCCGTCGCATTCTCATGGCTG
AGGTGCCCAGCATCGCCATCGAATACGTCTTCGTCCACAACAACACCTCT
GTCATTCAGGATGAGGTTCTCGCACAACGTCTGGGTCTGATTCCCCTCAA
GGGTTCCGTGGAGGGCATCAACTGGATGCGCTGGTTCAAGAAGCCTACCG
ACGACGATCCCAATGGCAGCAGTCCCGCCGATTACAACACCATCGTCTTG
CGCTTGGACGTCGAATGTACCAAGAACCCCAACGCGGATCCCGAGGAGAC
TGACCCCCGCAAACTCTACAAGAATGCGCACGTCTACGCCAAAGATATCA
CATTCCACCCCGTCGGTCGCCAGGAACAGTTCTTTGCTGGCGATGACGCA
ATTCAGCCCGTCAACCCGGACATCCTGGTCGCCAAGCTTCGTCCCGGTCA
GGCGATTGAAATGGAACTTCACTGTATCAAGGGTATCGGTGCCGACCATG
CCAAGTTCTCCCCTGTCGCCACGGCCACCTACCGTCTACTACCCGACATC
AAGATCCTCCGCCCCATCATCGGTGATGATGCCAAGAAGTTTGCCAAGTG
CTTCCCCAGCGGTGTCATTGGCCTCGAGAAGGTCACTCGTGAGGAGGCCA
AGCAGAAGGACAGCGGATATGAGGGCCACGAGGGCGAATTGAAGGCAGTT
GTTGTGGATCCCTTCAAGGATACCGTCAGCAGAGAGTGTCTGAGACACGA
GGAGTTCCAGGGCAAGGTCAAGCTCGGTCGCGTCCGCGACCACTTCATCT
TCAACATCGAGAGTGTTGGCCAATTCGAAAGCGACACCCTCTTCCTGGAG
AGCGTCAAGGTGCTGAAGCTGAAATGCGCAAGATGGAAGCGCGGCTTGAC
GGACCTTATGCGCTAAATCGTCGACATCAACCCAGAGACCGTCTCCAACA
TCCCCTCCACAGATTTTCCTGGTCACTGGCCCGGCGAGTCGCACGAATGG
TCCCTCGCAAAGTTCAAGAATATGGCGCCTCTCGTTCCCTCGCAGGAGGA
GCTTGATCGCAGAAGG
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0006351transcription, DNA-templated
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0046983protein dimerization activity
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001663CBS51388_001663Aspergillus niger CBS 513.88gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001663-T1CBS51388_001663-T1-proteinAspergillus niger CBS 513.88polypeptide


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001663-T1.cdsCBS51388_001663-T1.cdsAspergillus niger CBS 513.88CDS


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001663-T1.exon3CBS51388_001663-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001663-T1.exon2CBS51388_001663-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001663-T1.exon1CBS51388_001663-T1.exon1Aspergillus niger CBS 513.88exon


Properties
Property NameValue
NoteBUSCO:EOG09263CLY
DBxrefInterPro:IPR036603
DBxrefInterPro:IPR033901
DBxrefInterPro:IPR001514
DBxrefInterPro:IPR036643
DBxrefInterPro:IPR011262
DBxrefInterPro:IPR011263
DBxrefPFAM:PF01193
DBxrefPFAM:PF01000
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1286043..1287338 -
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