You are here

Home

CBS51388_001696-T1, CBS51388_001696-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001696-T1
Unique NameCBS51388_001696-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1389219..1390413+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001696-T1 ID=CBS51388_001696-T1|Name=CBS51388_001696-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=1195bp|location=Sequence derived from alignment at An02:1389219..1390413+ (Aspergillus niger CBS 513.88)
ATGTCACACTTTCTGCTATTCATATTTCGCAAACTCCTCAACACCTTCAT
CTACTCTACAAGACATGATCCACTACTCGCAAACGCCCATGGACTCTTCC
AAAAGGGCCTTCCTACCCAGCCCACCCACAATGTGCTGGTACTATTTACG
ACCATTCTAGGATTAATCCTCGAGCTCGCAGTAAGCAATCCAAATTCCCC
CAGAACGAGCACAAACTAACAAGTATCCATCATCACCTCAGATCCGCCAC
ATCATCGGCAACGTTGTAATGCCCCTCCTAATCCTCGAAACCATGGAGAA
CCAGAGCCCCAACCCAAACAAGGATGACAACAAGAAATCAAAACCAAAAC
CCACCATCACTCGCAGCCTTCTCCAAACCATCACCACCTTCCACCGCAAA
GAAGGACTCATTTTACTCCTCAACGGCTTCCAGTACGCCATCTACTACAA
TGTGAAGTACTTTATAGTAACAGGTTTACTCTCATCACCTATCGCACGCT
TCCCTGAACCCCTCGCTCATATCATTGCCTCCGTCGCACTCGCTGAATAC
CATTTCTTCCGGACAGCAAGCGCTGTCCTCCCTCCGGCTGAGCAGATGCG
CTACGTGCCTCTTGACCTTGATTTTAATCGGTGGGATGCGCTTCTCTTAC
CGACGCTGCTTTATGCTGTAGCCGAAGCTATCATGATGTATGTGCCGGGG
CTGTTGCTTTCCCCTCTTGATCTGGATGAGGTGCTGCTGCTGCCGTCGGA
CTTGTCAGGCATCACTGCCCTCGTAAGATCCGATATTCTTGTTGCGGGGC
TTATGCTCGTTGCTCAAGTCTTACTATTGTTTCCGGCGTATATTGTGCTT
GTTATGGTTGAGGGGAGTTTGGTGCCGGGGGATTGTGAGACGTTGATATC
TTTGCCGGAGAAGGAAGAGCAGGATGAGAAGCAAGAGGATGACAATAACA
ACTATGAAATGATGAAGTGGGGCTGGGATGATGAGGAAGAGGAGGAAGAG
GAGGAATGTCCAAAGCAGCAAGGCAGGCTCATCAAAGACATCTTCAGGTT
ACCAACACCGTTGCATGTGCTTGATGTGGTGGAGATGATTAGTGTGAGAC
AGTTGCTGTATTGTTTGGAGTTGCATGGGCAGATGTGTTTGTGTTTGGTT
GGGATTGCTGCGATGGTGCAATCGGTGGTGTATTTGGTGTCGTAG
back to top

Coding sequence (CDS) from alignment at An02:1389219..1390413+

>CBS51388_001696-T1 ID=CBS51388_001696-T1|Name=CBS51388_001696-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=2268bp|location=Sequence derived from alignment at An02:1389219..1390413+ (Aspergillus niger CBS 513.88)
ATGTCACACTTTCTGCTATTCATATTTCGCAAACTCCTCAACACCTTCAT
CTACTCTACAAGACATGATCCACTACTCGCAAACGCCCATGGACTCTTCC
AAAAGGGCCTTCCTACCCAGCCCACCCACAATGTGCTGGTACTATTTACG
ACCATTCTAGGATTAATCCTCGAGCTCGCAATCCGCCACATCATCGGCAA
CGTTGTAATGCCCCTCCTAATCCTCGAAACCATGGAGAACCAGAGCCCCA
ACCCAAACAAGGATGACAACAAGAAATCAAAACCAAAACCCACCATCACT
CGCAGCCTTCTCCAAACCATCACCACCTTCCACCGCAAAGAAGGACTCAT
TTTACTCCTCAACGGCTTCCAGTACGCCATCTACTACAATGTGAAGTACT
TTATAGTAACAGGTTTACTCTCATCACCTATCGCACGCTTCCCTGAACCC
CTCGCTCATATCATTGCCTCCGTCGCACTCGCTGAATACCATTTCTTCCG
GACAGCAAGCGCTGTCCTCCCTCCGGCTGAGCAGATGCGCTACGTGCCTC
TTGACCTTGATTTTAATCGGTGGGATGCGCTTCTCTTACCGACGCTGCTT
TATGCTGTAGCCGAAGCTATCATGATGTATGTGCCGGGGCTGTTGCTTTC
CCCTCTTGATCTGGATGAGGTGCTGCTGCTGCCGTCGGACTTGTCAGGCA
TCACTGCCCTCGTAAGATCCGATATTCTTGTTGCGGGGCTTATGCTCGTT
GCTCAAGTCTTACTATTGTTTCCGGCGTATATTGTGCTTGTTATGGTTGA
GGGGAGTTTGGTGCCGGGGGATTGTGAGACGTTGATATCTTTGCCGGAGA
AGGAAGAGCAGGATGAGAAGCAAGAGGATGACAATAACAACTATGAAATG
ATGAAGTGGGGCTGGGATGATGAGGAAGAGGAGGAAGAGGAGGAATGTCC
AAAGCAGCAAGGCAGGCTCATCAAAGACATCTTCAGGTTACCAACACCGT
TGCATGTGCTTGATGTGGTGGAGATGATTAGTGTGAGACAGTTGCTGTAT
TGTTTGGAGTTGCATGGGCAGATGTGTTTGTGTTTGGTTGGGATTGCTGC
GATGGTGCAATCGGTGGTGTATTTGGTGTCGTAGATGTCACACTTTCTGC
TATTCATATTTCGCAAACTCCTCAACACCTTCATCTACTCTACAAGACAT
GATCCACTACTCGCAAACGCCCATGGACTCTTCCAAAAGGGCCTTCCTAC
CCAGCCCACCCACAATGTGCTGGTACTATTTACGACCATTCTAGGATTAA
TCCTCGAGCTCGCAATCCGCCACATCATCGGCAACGTTGTAATGCCCCTC
CTAATCCTCGAAACCATGGAGAACCAGAGCCCCAACCCAAACAAGGATGA
CAACAAGAAATCAAAACCAAAACCCACCATCACTCGCAGCCTTCTCCAAA
CCATCACCACCTTCCACCGCAAAGAAGGACTCATTTTACTCCTCAACGGC
TTCCAGTACGCCATCTACTACAATGTGAAGTACTTTATAGTAACAGGTTT
ACTCTCATCACCTATCGCACGCTTCCCTGAACCCCTCGCTCATATCATTG
CCTCCGTCGCACTCGCTGAATACCATTTCTTCCGGACAGCAAGCGCTGTC
CTCCCTCCGGCTGAGCAGATGCGCTACGTGCCTCTTGACCTTGATTTTAA
TCGGTGGGATGCGCTTCTCTTACCGACGCTGCTTTATGCTGTAGCCGAAG
CTATCATGATGTATGTGCCGGGGCTGTTGCTTTCCCCTCTTGATCTGGAT
GAGGTGCTGCTGCTGCCGTCGGACTTGTCAGGCATCACTGCCCTCGTAAG
ATCCGATATTCTTGTTGCGGGGCTTATGCTCGTTGCTCAAGTCTTACTAT
TGTTTCCGGCGTATATTGTGCTTGTTATGGTTGAGGGGAGTTTGGTGCCG
GGGGATTGTGAGACGTTGATATCTTTGCCGGAGAAGGAAGAGCAGGATGA
GAAGCAAGAGGATGACAATAACAACTATGAAATGATGAAGTGGGGCTGGG
ATGATGAGGAAGAGGAGGAAGAGGAGGAATGTCCAAAGCAGCAAGGCAGG
CTCATCAAAGACATCTTCAGGTTACCAACACCGTTGCATGTGCTTGATGT
GGTGGAGATGATTAGTGTGAGACAGTTGCTGTATTGTTTGGAGTTGCATG
GGCAGATGTGTTTGTGTTTGGTTGGGATTGCTGCGATGGTGCAATCGGTG
GTGTATTTGGTGTCGTAG
back to top
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001696CBS51388_001696Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001696-T1.exon1CBS51388_001696-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001696-T1.exon2CBS51388_001696-T1.exon2Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001696-T1.cdsCBS51388_001696-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001696-T1CBS51388_001696-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1389219..1390413 +
Powered by Drupal