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CBS51388_001702-T1, CBS51388_001702-T1 (mRNA) Aspergillus niger CBS 513.88

Overview
NameCBS51388_001702-T1
Unique NameCBS51388_001702-T1
TypemRNA
OrganismAspergillus niger CBS 513.88
Sequences
The following sequences are available for this feature:

mRNA from alignment at An02:1410880..1411877+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>CBS51388_001702-T1 ID=CBS51388_001702-T1|Name=CBS51388_001702-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=998bp|location=Sequence derived from alignment at An02:1410880..1411877+ (Aspergillus niger CBS 513.88)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGGTGA
GTTTTCCTCTATAATTTTGGTGGTGATATAAATGGGGTGGATTTGAAGAT
TGGAGGTTTGGATGGGATATGGTGTGACTTGGGATGCTAACGGTTGATGT
GTTTTAGCCACCGCTGTCGCCCACTGCAAGGTATGAGAATTACATTCTCT
GTCTATCTATATCTCCTGGTCTAGGATTATCGTGTTGCGGATGCCGATGT
GTCGTTCGAATTGGTCAATATTGGTCTTGGAGGTTCGGAAGGATCTGGGT
ATCATTCGACATTTAAGGAGGATTATGAAGCTTGTGGATTGCCCGGAAGC
ACGGGGGAAGCGTTATCGAGTATCGAAACGAAGAACGACACGGCACAAGG
AAATTTTGAAGGAAGATCAATTACGTGAAGGGAAAAGTGAAGAAGACATG
CGCAACCAAACCGAACGACACATCTGCATCCGCACCGCATATATCAGATG
AACCAGATCGCAACGGAAAGAAGGAGAACGTCAAAACTGATTCGTTTTTT
CCCAACTACAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTC
TCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTACACTCACCTACCCG
TCGGGTTTTACGAAGTGCCATGGACGGGGTAATTGACAGGATTATTCAAT
GAAATAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCG
GTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTT
TACGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAA
GTACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGT
ACGACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAG
TTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAA
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Coding sequence (CDS) from alignment at An02:1410880..1411877+

>CBS51388_001702-T1 ID=CBS51388_001702-T1|Name=CBS51388_001702-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1728bp|location=Sequence derived from alignment at An02:1410880..1411877+ (Aspergillus niger CBS 513.88)
ATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCAC
CGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCC
AGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAG
CCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGT
CCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGG
CCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCAC
TCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCT
CGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTG
CCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGGCTTCCGTCCCGAGT
GTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCTGTCGCCCACTGCAA
GCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCCCCTCTCTCTGGTCC
AGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCCTCCTGATCGTTGGA
GCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGCGTCTCCGGTGGTGG
TCACACCTCCCAGGTTTACGCCATCCGTCAGGCCATCGCCAAGTCCATCG
TCGCCTACTACCAGAAGTACGTCGATGAGCACTCCAAGAACCAGCTGAAG
CAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTCGCCGACAACCGTCG
TACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCGCGCTCGCTACCAGA
AGTCCTACCGTTAAATGGCTTCCGTCCCGAGTGTGCAATGCTTCGGCAAG
AAGAAGACGGCCACCGCTGTCGCCCACTGCAAGCAAGGCAAGGGCATGAT
CCGGGTCAACGGCCAGCCCCTCTCTCTGGTCCAGCCTGAGATCCTCCGCT
TCAAGGTCTACGAGCCCCTCCTGATCGTTGGAGCCGACAAGTTCGCCGGT
GTCGACATCCGCGTCCGCGTCTCCGGTGGTGGTCACACCTCCCAGGTTTA
CGCCATCCGTCAGGCCATCGCCAAGTCCATCGTCGCCTACTACCAGAAGT
ACGTCGATGAGCACTCCAAGAACCAGCTGAAGCAGGCTCTTGTCCAGTAC
GACCGCACACTCCTCGTCGCCGACAACCGTCGTACGGAGCCCAAGAAGTT
CGGTGGTCGTGGTGCCCGCGCTCGCTACCAGAAGTCCTACCGTTAAATGG
CTTCCGTCCCGAGTGTGCAATGCTTCGGCAAGAAGAAGACGGCCACCGCT
GTCGCCCACTGCAAGCAAGGCAAGGGCATGATCCGGGTCAACGGCCAGCC
CCTCTCTCTGGTCCAGCCTGAGATCCTCCGCTTCAAGGTCTACGAGCCCC
TCCTGATCGTTGGAGCCGACAAGTTCGCCGGTGTCGACATCCGCGTCCGC
GTCTCCGGTGGTGGTCACACCTCCCAGGTTTACGCCATCCGTCAGGCCAT
CGCCAAGTCCATCGTCGCCTACTACCAGAAGTACGTCGATGAGCACTCCA
AGAACCAGCTGAAGCAGGCTCTTGTCCAGTACGACCGCACACTCCTCGTC
GCCGACAACCGTCGTACGGAGCCCAAGAAGTTCGGTGGTCGTGGTGCCCG
CGCTCGCTACCAGAAGTCCTACCGTTAA
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Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
TermDefinition
GO:0005840ribosome
Vocabulary: Molecular Function
TermDefinition
GO:0003735structural constituent of ribosome
Vocabulary: Biological Process
TermDefinition
GO:0006412translation
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesType
CBS51388_001702CBS51388_001702Aspergillus niger CBS 513.88gene


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001702-T1.exon1CBS51388_001702-T1.exon1Aspergillus niger CBS 513.88exon
CBS51388_001702-T1.exon2CBS51388_001702-T1.exon2Aspergillus niger CBS 513.88exon
CBS51388_001702-T1.exon3CBS51388_001702-T1.exon3Aspergillus niger CBS 513.88exon
CBS51388_001702-T1.exon4CBS51388_001702-T1.exon4Aspergillus niger CBS 513.88exon


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001702-T1.cdsCBS51388_001702-T1.cdsAspergillus niger CBS 513.88CDS


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesType
CBS51388_001702-T1CBS51388_001702-T1-proteinAspergillus niger CBS 513.88polypeptide


Properties
Property NameValue
DBxrefInterPro:IPR020568
DBxrefInterPro:IPR020574
DBxrefInterPro:IPR014721
DBxrefInterPro:IPR000754
DBxrefPFAM:PF00380
Producthypothetical protein
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Aspergillus niger CBS 513.88 whole genome analysis2021-11-01
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
An02supercontigAn02:1410880..1411877 +
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