|
|
Sequences
The following sequences are available for this feature:
mRNA from alignment at An02:1432386..1433133+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >CBS51388_001708-T1 ID=CBS51388_001708-T1|Name=CBS51388_001708-T1|organism=Aspergillus niger CBS 513.88|type=mRNA|length=748bp|location=Sequence derived from alignment at An02:1432386..1433133+ (Aspergillus niger CBS 513.88)
ATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGG
TCCTTTGGCCGGAGATGGTATGTACAACCCAGTGCACGCTTCACGAATTA
TACGATTTGAGACCATGTCTAATCTGAGATTGAATTGCAGGCAAGCTCGT
TTTCGGTGTTGCCCGTATCTTTGCCTCCTTCAACGATACCTTCGTCCACG
TCACCGATCTGAGGTTCGTCACATCTTAAAGTACCCGAATATCGACTGCA
CGAAACTCCGACTTCCGTTCTCCGGTGAACATTTTGCGCCCCGCAATGGA
CTAGGAGTCGGATATCGTGAATTGTCGCATAGGCTATGGCGCAGGATACA
GTTGGCTAACTGATTGGGATAACAGTGGTCGCGAAACCATCTGCCGTGTC
ACCGGTGGTATGAAGGTCAAGGCTGACCGTGACGAGTCTTCCCCCTACGC
TGCCATGTTGGCTGCTCAGGATGTTGCTGCTCGCTGCAAGGAGCTTGGCA
TCAACGCCCTCCACATCAAGATCCGTGCCACTGGTGGTATGTGAACGAGC
GCTATAACAGCACCAACTCTGGAGACAAAACTAATCTTCGATATAGGTAA
CGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCGTGCTCTTG
CCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCCCCACTCCC
TCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGTTTGTAA back to topCoding sequence (CDS) from alignment at An02:1432386..1433133+ >CBS51388_001708-T1 ID=CBS51388_001708-T1|Name=CBS51388_001708-T1|organism=Aspergillus niger CBS 513.88|type=CDS|length=1812bp|location=Sequence derived from alignment at An02:1432386..1433133+ (Aspergillus niger CBS 513.88)
ATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCTCGG
TCCTTTGGCCGGAGATGGCAAGCTCGTTTTCGGTGTTGCCCGTATCTTTG
CCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGTGGTCGCGAA
ACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAAGGCTGACCGTGACGA
GTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGGATGTTGCTGCTCGCT
GCAAGGAGCTTGGCATCAACGCCCTCCACATCAAGATCCGTGCCACTGGT
GGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCGTGC
TCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCCCCA
CTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGTTTG
TAAATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTCTCT
CGGTCCTTTGGCCGGAGATGGCAAGCTCGTTTTCGGTGTTGCCCGTATCT
TTGCCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGTGGTCGC
GAAACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAAGGCTGACCGTGA
CGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGGATGTTGCTGCTC
GCTGCAAGGAGCTTGGCATCAACGCCCTCCACATCAAGATCCGTGCCACT
GGTGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCTCCG
TGCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCACCC
CCACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGTCGT
TTGTAAATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGTCTC
TCTCGGTCCTTTGGCCGGAGATGGCAAGCTCGTTTTCGGTGTTGCCCGTA
TCTTTGCCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGTGGT
CGCGAAACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAAGGCTGACCG
TGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGGATGTTGCTG
CTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCACATCAAGATCCGTGCC
ACTGGTGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGCCCT
CCGTGCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACGTCA
CCCCCACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGTCGT
CGTTTGTAAATGGCTCCCAAGAAGACCGCCGGTGCTGCCAAGGAGAACGT
CTCTCTCGGTCCTTTGGCCGGAGATGGCAAGCTCGTTTTCGGTGTTGCCC
GTATCTTTGCCTCCTTCAACGATACCTTCGTCCACGTCACCGATCTGAGT
GGTCGCGAAACCATCTGCCGTGTCACCGGTGGTATGAAGGTCAAGGCTGA
CCGTGACGAGTCTTCCCCCTACGCTGCCATGTTGGCTGCTCAGGATGTTG
CTGCTCGCTGCAAGGAGCTTGGCATCAACGCCCTCCACATCAAGATCCGT
GCCACTGGTGGTAACGGCACCAAGACCCCCGGTCCCGGTGCTCAGTCCGC
CCTCCGTGCTCTTGCCCGTTCCGGCATGAGAATCGGCCGTATCGAGGACG
TCACCCCCACTCCCTCCGACTCTACTCGTCGCAAGGGTGGTCGCCGTGGT
CGTCGTTTGTAA back to top
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Cellular Component
| Term | Definition |
|---|
| GO:0005840 | ribosome |
Vocabulary: Molecular Function
| Term | Definition |
|---|
| GO:0003735 | structural constituent of ribosome |
Vocabulary: Biological Process
| Term | Definition |
|---|
| GO:0006412 | translation |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Properties
| Property Name | Value |
|---|
| DBxref | InterPro:IPR018102 |
| DBxref | InterPro:IPR001971 |
| DBxref | InterPro:IPR036967 |
| DBxref | PFAM:PF00411 |
| Product | S11 |
| Product | ribosomal protein S14 |
Analyses
This mRNA is derived from or has results from the following analyses
Alignments
The following features are aligned
| Aligned Feature | Feature Type | Alignment Location |
|---|
| An02 | supercontig | An02:1432386..1433133 + |
|
